Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27e21
         (454 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q06691 Cluster: Telokin-like protein 20; n=6; Nucleopol...   130   1e-29
UniRef50_A0EYW8 Cluster: Tlp-20; n=1; Ecotropis obliqua NPV|Rep:...    43   0.004
UniRef50_Q9J859 Cluster: ORF78; n=7; Nucleopolyhedrovirus|Rep: O...    42   0.006
UniRef50_Q0IL26 Cluster: Tlp-20; n=1; Leucania separata nuclear ...    41   0.011
UniRef50_Q9YMN7 Cluster: LdOrf-82 peptide; n=1; Lymantria dispar...    40   0.019
UniRef50_Q64811 Cluster: ORF 201; n=1; Autographa californica nu...    40   0.019
UniRef50_Q461Z1 Cluster: Orf75; n=2; Nucleopolyhedrovirus|Rep: O...    40   0.025
UniRef50_Q91BE7 Cluster: Telokin-like protein-20; n=2; Spodopter...    40   0.033
UniRef50_O10335 Cluster: Telokin-like protein 20 homolog; n=7; N...    38   0.10 
UniRef50_Q06670 Cluster: Capsid-associated protein Vp91 precurso...    38   0.13 
UniRef50_Q8V5S4 Cluster: ORF77; n=3; Nucleopolyhedrovirus|Rep: O...    35   0.94 
UniRef50_Q0ZB86 Cluster: Delta-carbonic anhydrase; n=1; Emiliani...    33   2.9  
UniRef50_Q16IA4 Cluster: Putative uncharacterized protein; n=1; ...    33   3.8  
UniRef50_Q0DFM2 Cluster: Os05g0582200 protein; n=4; Oryza sativa...    31   8.7  

>UniRef50_Q06691 Cluster: Telokin-like protein 20; n=6;
           Nucleopolyhedrovirus|Rep: Telokin-like protein 20 -
           Autographa californica nuclear polyhedrosis virus
           (AcMNPV)
          Length = 180

 Score =  130 bits (314), Expect = 1e-29
 Identities = 60/70 (85%), Positives = 62/70 (88%)
 Frame = +3

Query: 195 KKRGVGAHIIKVASSPQLRLLYKNAYSAVSCGNYSILCNLVQNGEYXLNAIMFNCAEIKL 374
           KKRGVGAHIIKVASSPQLRLLYKNAYS VSCGNY +LCNLVQNGEY LNAIMFNCAEIKL
Sbjct: 36  KKRGVGAHIIKVASSPQLRLLYKNAYSTVSCGNYGVLCNLVQNGEYDLNAIMFNCAEIKL 95

Query: 375 NKGPNVISNK 404
           NKG  +   K
Sbjct: 96  NKGQMLFQTK 105



 Score = 77.0 bits (181), Expect = 2e-13
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = +2

Query: 89  MANTSNITPDIIVNAQINSEDENVLDFIIEDEYYLKKTG 205
           MA+ SNITPDIIVNAQINSEDENVLDFIIEDEYYLKK G
Sbjct: 1   MASMSNITPDIIVNAQINSEDENVLDFIIEDEYYLKKRG 39



 Score = 46.0 bits (104), Expect = 4e-04
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +1

Query: 379 RGQMLFQTKIYRPDNNKTDAAVNTS 453
           +GQMLFQTKI+R DN+KTDAAV+TS
Sbjct: 97  KGQMLFQTKIWRSDNSKTDAAVHTS 121


>UniRef50_A0EYW8 Cluster: Tlp-20; n=1; Ecotropis obliqua NPV|Rep:
           Tlp-20 - Ecotropis obliqua NPV
          Length = 284

 Score = 42.7 bits (96), Expect = 0.004
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
 Frame = +3

Query: 195 KKRGVGAHIIKVASSPQLRLLYKNAYSAVSCGNYSILCNLV-----QNGEYXLNAIMFNC 359
           KK  VGA+ + +  +  L  L +++Y  V CG++ I  N+V     +     LN I+FNC
Sbjct: 50  KKLAVGAYNLNILDTQLLNTLEESSYHVVVCGDFVITHNIVDRKYARTPNTKLNVILFNC 109

Query: 360 AEIKLNK 380
             + LNK
Sbjct: 110 KPVVLNK 116



 Score = 36.3 bits (80), Expect = 0.31
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +2

Query: 89  MANTSNITPDIIVNAQINSE-DENVLDFIIEDEYYLKK 199
           MA  +N T  I V   ++ E D N+L FI++DEY+LKK
Sbjct: 14  MATDNNGTVSIAVYTIVDKENDYNILSFIVQDEYHLKK 51


>UniRef50_Q9J859 Cluster: ORF78; n=7; Nucleopolyhedrovirus|Rep:
           ORF78 - Spodoptera exigua MNPV
          Length = 196

 Score = 41.9 bits (94), Expect = 0.006
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = +3

Query: 195 KKRGVGAHIIKVASSPQLRLLYKNAYSAVSCGNYSILCNLVQNGEYXLNAIMFNCAEIKL 374
           KK  VGA+ I +  +  L  L ++  + ++CG+Y ++ N V N    +N I+FN     L
Sbjct: 37  KKLAVGAYNITILDTQLLNSLQQHRCNTIACGDYVVVYNFVDNSN-KINVILFNIKPTIL 95

Query: 375 NKG 383
            KG
Sbjct: 96  KKG 98



 Score = 33.9 bits (74), Expect = 1.6
 Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +2

Query: 89  MANTSNITPDIIVNAQINSEDE-NVLDFIIEDEYYLKK 199
           MA  ++ T DI V+  ++ E + NVL FI+ +EY+LKK
Sbjct: 1   MATNNSGTIDISVHVTLDKEAKRNVLSFIVREEYHLKK 38


>UniRef50_Q0IL26 Cluster: Tlp-20; n=1; Leucania separata nuclear
           polyhedrosis virus|Rep: Tlp-20 - Leucania separata
           nuclear polyhedrosis virus (LsNPV)
          Length = 285

 Score = 41.1 bits (92), Expect = 0.011
 Identities = 24/63 (38%), Positives = 37/63 (58%)
 Frame = +3

Query: 195 KKRGVGAHIIKVASSPQLRLLYKNAYSAVSCGNYSILCNLVQNGEYXLNAIMFNCAEIKL 374
           KK  +GA+ +K+  +  L+ L +     VS G+Y I+ N+  N    +NAI+FN   IKL
Sbjct: 38  KKLAIGAYALKILDTKLLQSLGERKCIVVSGGDYVIVHNI--NEANGINAILFNKNPIKL 95

Query: 375 NKG 383
           +KG
Sbjct: 96  HKG 98



 Score = 39.5 bits (88), Expect = 0.033
 Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 89  MANTSNITPDIIVNAQI--NSEDENVLDFIIEDEYYLKK 199
           MA  +N T DI V   +  N ED NVL FI++DE +LKK
Sbjct: 1   MATNNNATVDIAVYVSMDRNDEDRNVLSFIVQDECHLKK 39


>UniRef50_Q9YMN7 Cluster: LdOrf-82 peptide; n=1; Lymantria dispar
           MNPV|Rep: LdOrf-82 peptide - Lymantria dispar
           multicapsid nuclear polyhedrosis virus (LdMNPV)
          Length = 223

 Score = 40.3 bits (90), Expect = 0.019
 Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +3

Query: 195 KKRGVGAHIIKVASSPQLR-LLYKNAYSAVSCGNYSILCNLVQNGEYXLNAIMFNCAEIK 371
           KK  VGA+ I V  +  L  LL K  Y+ V CGNY+++ N  Q  E  L  I+FN + I 
Sbjct: 70  KKLTVGAYNINVLDTRLLDGLLEKRCYTIV-CGNYNVIYNFTQ--EKTLRVILFNASPIV 126

Query: 372 LNK 380
           L K
Sbjct: 127 LKK 129


>UniRef50_Q64811 Cluster: ORF 201; n=1; Autographa californica
           nucleopolyhedrovirus|Rep: ORF 201 - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 67

 Score = 40.3 bits (90), Expect = 0.019
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +1

Query: 4   YLEPLGVSRFVKFKINCQIN 63
           +LEPLG SRFVKFKINCQI+
Sbjct: 48  HLEPLGESRFVKFKINCQIH 67


>UniRef50_Q461Z1 Cluster: Orf75; n=2; Nucleopolyhedrovirus|Rep:
           Orf75 - Trichoplusia ni SNPV
          Length = 278

 Score = 39.9 bits (89), Expect = 0.025
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   ITWSRLV*VVSSNLXXXXXXXXXXXXXXXMANTSNITPDIIVNAQINSE-DENVLDFIIE 178
           +T  RL+   SSN                MA  ++ T DI V   ++ E D+N+L FI++
Sbjct: 5   MTLRRLLNSCSSNSLYIDKYIIENITSKNMATNNSGTVDIAVYVTLDKENDKNILSFIVQ 64

Query: 179 DEYYLKK 199
           DEY+LKK
Sbjct: 65  DEYHLKK 71


>UniRef50_Q91BE7 Cluster: Telokin-like protein-20; n=2; Spodoptera
           litura NPV|Rep: Telokin-like protein-20 - Spodoptera
           litura multicapsid nucleopolyhedrovirus (SpltMNPV)
          Length = 197

 Score = 39.5 bits (88), Expect = 0.033
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
 Frame = +3

Query: 195 KKRGVGAHIIKVASSPQL--RLLYKNAY---SAVSCGNYSILCNLVQNGEYXLNAIMFNC 359
           KK  +GA+ I V  S ++  +LL  N +     V+CG + I CN  +N    +NAI+FN 
Sbjct: 37  KKLAIGAYAINVIDSNKILNKLLNDNDHVLNKIVACGEFLIACN--ENESNGINAILFNK 94

Query: 360 AEIKLNKG 383
           + + L KG
Sbjct: 95  SCVTLKKG 102



 Score = 34.7 bits (76), Expect = 0.94
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 89  MANTSNITPDIIVNAQINSE-DENVLDFIIEDEYYLKK 199
           M   +N T DI V+  +  E D+ VL FI++DE +LKK
Sbjct: 1   MTTNNNGTVDIAVDVNLTDENDKKVLSFIVQDECHLKK 38


>UniRef50_O10335 Cluster: Telokin-like protein 20 homolog; n=7;
           Nucleopolyhedrovirus|Rep: Telokin-like protein 20
           homolog - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 155

 Score = 37.9 bits (84), Expect = 0.10
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +3

Query: 210 GAHIIKVASSPQLRLLYKNAYSAVSCGNYSILCNLVQNGEYXLNAIMF 353
           GAH ++V +SP+L  L+   Y+ ++ G+Y+   NLV    +    ++F
Sbjct: 40  GAHEVRVIASPELDALHNGPYNEIALGDYTFHFNLVAANRFGAQVMLF 87


>UniRef50_Q06670 Cluster: Capsid-associated protein Vp91 precursor;
           n=4; Nucleopolyhedrovirus|Rep: Capsid-associated protein
           Vp91 precursor - Autographa californica nuclear
           polyhedrosis virus (AcMNPV)
          Length = 847

 Score = 37.5 bits (83), Expect = 0.13
 Identities = 20/41 (48%), Positives = 23/41 (56%)
 Frame = -2

Query: 123 MMSGVMXXXXXXXXXXXXXXXXXXIYFKFDETTYTKRLQVI 1
           MMSGVM                  IYF+FDETT+TKRLQV+
Sbjct: 1   MMSGVMLLMLAIFLIIAFTLMYLAIYFEFDETTFTKRLQVM 41


>UniRef50_Q8V5S4 Cluster: ORF77; n=3; Nucleopolyhedrovirus|Rep:
           ORF77 - Helicoverpa zea SNPV
          Length = 225

 Score = 34.7 bits (76), Expect = 0.94
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +3

Query: 195 KKRGVGAHIIKVASSPQLRLLYKNAYSAVSCGNYSILCNLVQNGEYXLNAIMFNCAEIKL 374
           KK  VGA+ + +  +  L  L+    + ++CG + +  N  QN    +NAI+ N     L
Sbjct: 52  KKLAVGAYCVNILDTRLLSNLHNKQCATIACGYFVVTYN--QNETGGINAILLNTRPTIL 109

Query: 375 NKG 383
            KG
Sbjct: 110 KKG 112


>UniRef50_Q0ZB86 Cluster: Delta-carbonic anhydrase; n=1; Emiliania
           huxleyi|Rep: Delta-carbonic anhydrase - Emiliania
           huxleyi
          Length = 702

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +2

Query: 95  NTSNITPDIIVNAQINSEDENVLDFIIEDEYYLKKTGRWRPYYQGG 232
           N++N T D+  N      D +  D++ ++EYY  K  +  PY   G
Sbjct: 444 NSTNSTKDLYANHVHGYHDRDAEDYVSKEEYYESKKNKGDPYADDG 489


>UniRef50_Q16IA4 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 663

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 10  EPLGVSRFVKFKINCQIN*SKRYYKKNGKHEQHYARHH 123
           E +G  R+   K NC+ +  + +  KN +H+ H+ RHH
Sbjct: 305 ESMGYDRYQYCK-NCRADIDRSFLPKNERHQHHHHRHH 341


>UniRef50_Q0DFM2 Cluster: Os05g0582200 protein; n=4; Oryza sativa
            (japonica cultivar-group)|Rep: Os05g0582200 protein -
            Oryza sativa subsp. japonica (Rice)
          Length = 2084

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
 Frame = -3

Query: 353  KHYCVKXVFAVLHQIAQNTIVA-----ARHCR-IGVFVQQSKLRRASHLDNMGANAPFFL 192
            K Y  + +FA++ ++  N +V      A +CR  G+ V+Q+KL+  +  D   A+    L
Sbjct: 1835 KEYIAEKMFAIIEEVGPNNVVQVITDNASNCRAAGLMVEQNKLKFLAIADTRFASTIVML 1894

Query: 191  SNIRLQL*NLV 159
               R    NL+
Sbjct: 1895 KRFRAIKENLI 1905


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,565,201
Number of Sequences: 1657284
Number of extensions: 6861761
Number of successful extensions: 16567
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16562
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)