Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27e20
(420 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0016 + 31042619-31042795,31043066-31043170 56 9e-09
06_03_0395 - 20354713-20355570 31 0.50
09_04_0504 + 18180321-18181013 26 0.55
06_01_0873 - 6693397-6694038,6694231-6694370,6694713-6694930,669... 29 1.1
06_03_0078 + 16291254-16291532,16291654-16291725 29 2.0
07_03_1790 - 29536497-29536625,29536734-29536848,29537357-295375... 28 2.7
07_03_1713 + 28939446-28939574,28939674-28940231,28940338-289404... 28 2.7
07_01_0973 - 8193002-8193261,8193388-8193485,8194117-8194401,819... 28 2.7
07_03_0332 + 16880184-16881017,16881334-16881462,16882685-168827... 28 3.5
06_01_0707 + 5136210-5136584 28 3.5
03_05_0777 + 27636342-27637115 28 3.5
02_05_0938 + 32901143-32901215,32901841-32901982,32902243-329023... 28 3.5
12_02_0625 - 21331209-21331273,21331364-21331555,21332348-213325... 27 4.6
11_06_0326 - 22382001-22383248 27 4.6
11_01_0197 + 1554449-1555101,1555462-1555558 27 4.6
04_04_0347 + 24564589-24565296 27 6.1
12_02_0991 + 25079293-25079925,25080221-25081116,25081721-25082003 27 8.1
08_02_0290 + 15383473-15383669,15385057-15385267,15386389-153864... 27 8.1
08_01_1010 - 10215625-10216335,10216372-10216473 27 8.1
08_01_0423 + 3740344-3740408,3740949-3741015,3742110-3742218,374... 27 8.1
06_01_0211 + 1604799-1605037,1605420-1605575,1605972-1606043,160... 27 8.1
05_01_0594 - 5337804-5337976,5338282-5338436,5338591-5338745,533... 27 8.1
04_03_0314 - 14238620-14240128 27 8.1
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856... 27 8.1
01_06_0946 + 33220910-33222221,33223373-33223734,33223863-332240... 27 8.1
07_01_0466 - 3518315-3521428 23 8.5
>03_06_0016 + 31042619-31042795,31043066-31043170
Length = 93
Score = 56.4 bits (130), Expect = 9e-09
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 180 DPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTA-VFCSSIS 356
DPR+ R+Y PP +DL DY L +VF + G+M+R K C+W A +FC+
Sbjct: 19 DPRQPSTARQYTPP---KLSPQDLPIDYAGFLAVVFGVLGVMLRYKVCSWIAIIFCAQSL 75
Query: 357 FANSRVSDDTKQIVSSFM 410
+D KQ+ +FM
Sbjct: 76 VNMKNFENDLKQLSMAFM 93
>06_03_0395 - 20354713-20355570
Length = 285
Score = 30.7 bits (66), Expect = 0.50
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 192 ADRERRYKPPPPTSAPAE 245
ADR RR +PPPPT+ P E
Sbjct: 119 ADRGRRRQPPPPTAPPLE 136
>09_04_0504 + 18180321-18181013
Length = 230
Score = 26.2 bits (55), Expect(2) = 0.55
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 174 SPDPRRADRERRYKPPPPTSAPA 242
SP + + RR PPPP PA
Sbjct: 118 SPKRSKNSKRRRVSPPPPQPVPA 140
Score = 23.0 bits (47), Expect(2) = 0.55
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 216 PPPPTSAPAEDL 251
PPPPT+A A D+
Sbjct: 141 PPPPTTADAADV 152
>06_01_0873 -
6693397-6694038,6694231-6694370,6694713-6694930,
6695040-6695133,6695247-6695483,6696192-6696260,
6696513-6696636
Length = 507
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 231 SAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISFANSRVS 377
SA TT YM + G+V + L AW +V + +SF+ S ++
Sbjct: 189 SADCSVFTTSYMVVFGVVQVFFSQLQSLHEVAWLSVLAAVMSFSYSAIA 237
>06_03_0078 + 16291254-16291532,16291654-16291725
Length = 116
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 108 LLRRVTATNI---CGPIIKSGKMQLSPDPRRADRERRYKPPPPT 230
LLRR T+ CGPI + + LS R + PPPP+
Sbjct: 18 LLRRFAYTSYSSSCGPIRRHAAVALSSTTTTTTRFAAWSPPPPS 61
>07_03_1790 -
29536497-29536625,29536734-29536848,29537357-29537508,
29537589-29537737,29538936-29539098,29539575-29539686,
29539791-29540152
Length = 393
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 147 IIKSGKMQLSPDPRRADRERRYKPPPPTSAPAEDLTTD 260
+++S +SP P PPPP P ++L +D
Sbjct: 53 LLRSSFASVSPGPAPGSGTGECPPPPPAPLPPDELASD 90
>07_03_1713 +
28939446-28939574,28939674-28940231,28940338-28940460,
28940676-28940912
Length = 348
Score = 28.3 bits (60), Expect = 2.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 132 NICGPIIKSGKMQLSPDPRRADRERRYKPPPPTSAP 239
N C I+ G +P P A + Y PPPP P
Sbjct: 111 NQCWKILPWGPEAYAPPPPPAYGHQAYPPPPPNREP 146
>07_01_0973 -
8193002-8193261,8193388-8193485,8194117-8194401,
8195559-8195773,8196549-8197058
Length = 455
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 6/31 (19%)
Frame = +3
Query: 171 LSPDPRRADRERRYKP------PPPTSAPAE 245
LSP P A R R KP PPP APAE
Sbjct: 68 LSPSPATAPRAARQKPLPSPSPPPPPPAPAE 98
>07_03_0332 +
16880184-16881017,16881334-16881462,16882685-16882750,
16883159-16883224,16884419-16884457,16884858-16885028
Length = 434
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 216 PPPPTSAPAEDLTTDY 263
PPPP+SAPA + DY
Sbjct: 251 PPPPSSAPARTSSADY 266
>06_01_0707 + 5136210-5136584
Length = 124
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 132 NICGPIIKSGKMQLSPDPRRADRERRYKPPPPTSAPAE 245
++ G + G++ LSP + R +PPPP S A+
Sbjct: 62 HVTGGRVSGGRVLLSPSGTSSLRRSHRRPPPPHSLGAQ 99
>03_05_0777 + 27636342-27637115
Length = 257
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 189 RADRERRYKPPPPTSAPAE 245
RA+ ER +PPPP PAE
Sbjct: 201 RAELERALQPPPPPPPPAE 219
>02_05_0938 +
32901143-32901215,32901841-32901982,32902243-32902314,
32902573-32902644,32902711-32902782,32902913-32902948,
32903001-32903072,32903319-32903387,32903483-32903554,
32903668-32903739,32903838-32903909,32904153-32904224,
32904470-32904541,32904623-32904694,32904782-32904853,
32904911-32905003,32905150-32905218,32905315-32905386,
32905479-32905552,32905643-32905771,32905966-32906331,
32906584-32906954,32907522-32907890
Length = 884
Score = 27.9 bits (59), Expect = 3.5
Identities = 8/39 (20%), Positives = 21/39 (53%)
Frame = +3
Query: 246 DLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISFA 362
++ + N+ +++ G ++C+W V C +++FA
Sbjct: 30 EIKKSFRNVDNVLYDWAGDGAPRRYCSWRGVLCDNVTFA 68
>12_02_0625 -
21331209-21331273,21331364-21331555,21332348-21332558,
21333600-21333700,21333839-21333844,21333956-21334051,
21334485-21334497
Length = 227
Score = 27.5 bits (58), Expect = 4.6
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = -2
Query: 224 WRWFIATFSVSTTWIWRQLHL 162
W WF+ WIW HL
Sbjct: 21 WGWFVPATGALRVWIWDSAHL 41
>11_06_0326 - 22382001-22383248
Length = 415
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 168 QLSPDPRRADRERRYKPPPPTSAPA 242
QL+ DP R + R PPPP APA
Sbjct: 252 QLAADPARKSKPRA--PPPPPPAPA 274
>11_01_0197 + 1554449-1555101,1555462-1555558
Length = 249
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 195 DRERRYKPPPPTSAPAEDLTT-DYMNIL 275
D E R+ PPP PAED ++ +Y +L
Sbjct: 125 DSEYRHSPPPRPKKPAEDKSSMEYTEVL 152
>04_04_0347 + 24564589-24565296
Length = 235
Score = 27.1 bits (57), Expect = 6.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 156 SGKMQLSPDPRRADRERRYKPPPPTSAPAED 248
S +Q SP P D + PPPP+ A++
Sbjct: 160 SSHVQYSPAPTPGDGRHQSPPPPPSPPSADE 190
>12_02_0991 + 25079293-25079925,25080221-25081116,25081721-25082003
Length = 603
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +3
Query: 138 CGPIIKSGKMQLSPDPRRADRERRYKPPPPTSAPAEDLTT 257
C P + L +P +KPPPPT P + TT
Sbjct: 29 CCPSPAALHKSLKNNPHHHGGGGNHKPPPPTPPPQQHKTT 68
>08_02_0290 +
15383473-15383669,15385057-15385267,15386389-15386440,
15386545-15386863,15387022-15387121,15387391-15387657,
15387780-15387857,15387943-15388032,15388119-15388168,
15388267-15388366,15388777-15388875,15389023-15389136,
15389238-15389412,15389726-15390132,15390565-15390639,
15391412-15391438
Length = 786
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 92 YPNLFVIKKSNRYKYLWAYNKKWKDAVVA 178
YP +FV+ N +K LW K + D A
Sbjct: 406 YPEMFVVNAGNGFKLLWNTVKGFLDPKTA 434
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 171 LSPDPRRADRERRYKPPPPTSAPAE 245
LSP PR A E PPP+ P++
Sbjct: 196 LSPPPRAASPEYSPSTPPPSPVPSD 220
>08_01_0423 +
3740344-3740408,3740949-3741015,3742110-3742218,
3742320-3742447,3742899-3743324
Length = 264
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 162 KMQLSPDPRRADRERRYKPPPPTSAPAEDL 251
K+Q D +A+R R++ P + APA+D+
Sbjct: 170 KLQQQLDRLKAERARQHHPATSSPAPADDV 199
>06_01_0211 +
1604799-1605037,1605420-1605575,1605972-1606043,
1606325-1606396,1606608-1606679,1606777-1606848,
1606936-1607007,1607092-1607160,1607278-1607349,
1607630-1607701,1607786-1607857,1607940-1608011,
1608100-1608171,1608286-1608357,1608449-1608520,
1608633-1608704,1608801-1608872,1608962-1609033,
1609120-1609191,1609283-1609353,1609439-1609570,
1609676-1610014,1610097-1610467,1610599-1610928,
1611115-1611150
Length = 964
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 321 CAWTAVFCSSISFANSRVSDDTKQIVSSFML 413
CAW V C + SFA +S D + + ML
Sbjct: 63 CAWRGVTCDNASFAVLALSLDISEAILFVML 93
>05_01_0594 -
5337804-5337976,5338282-5338436,5338591-5338745,
5338864-5338992,5339096-5339189,5339293-5339366,
5339716-5339851,5341546-5341562
Length = 310
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 213 KPPPPTSAPAEDLTTDYMNILGMVFSMC 296
+PP P AP+E+ TD +N + ++C
Sbjct: 210 RPPTPDQAPSEEGATDSVNRSNLEDTLC 237
>04_03_0314 - 14238620-14240128
Length = 502
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 171 LSPDPRRADRERRYKPPPPTSAP 239
LSP P R R PPP T+AP
Sbjct: 14 LSPQPIHPRRVRLPNPPPSTAAP 36
>03_03_0038 +
13984525-13984917,13985351-13985429,13985535-13985628,
13985712-13985844
Length = 232
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 186 RRADRERRYKPPPPTSAPAED 248
+R + ERR KPPPP P ++
Sbjct: 70 QRHEVERRKKPPPPPPPPKQE 90
>01_06_0946 +
33220910-33222221,33223373-33223734,33223863-33224073,
33224174-33224411,33224492-33224642,33224733-33224997,
33231775-33231820,33232167-33232815,33232883-33233384,
33235023-33235360,33235466-33235676,33235769-33235992,
33236042-33236115,33236147-33236234,33236316-33236612
Length = 1655
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 209 ATFSVSTTWIWRQLHLSTFYYRPTNICSGYS 117
AT ++W S+F+Y PT+ C GY+
Sbjct: 267 ATAGQVQRFVWINGAWSSFWYYPTDPCDGYA 297
>07_01_0466 - 3518315-3521428
Length = 1037
Score = 22.6 bits (46), Expect(2) = 8.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 216 PPPPTSAPAEDLTTDYMNILGMVF 287
PPPP AP E D ++ + +F
Sbjct: 263 PPPPPEAPVERSKHDLVDKMPYLF 286
Score = 22.2 bits (45), Expect(2) = 8.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 144 PIIKSGKMQLSPDPRRADRERRYKPPPPTSAP 239
P++ S + S + + + PPPPT P
Sbjct: 218 PVMASEAVAASAEAAPEEEQILTPPPPPTPTP 249
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,671,155
Number of Sequences: 37544
Number of extensions: 219371
Number of successful extensions: 1318
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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