Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27e16
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.2  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 340 DEQTKHMLIEKYYDL 384
           +EQ  H+ IEKYY++
Sbjct: 318 EEQVYHLEIEKYYNI 332


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 328 IFQLDEQTKHMLIEKYY 378
           + +LD + KHMLI K Y
Sbjct: 111 LHKLDNKLKHMLIWKSY 127


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 137 GSISV*LLTNTSTSVYIFLLF 75
           G+  V + T+ STSVY+ ++F
Sbjct: 295 GTAIVSISTSVSTSVYLAIVF 315


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 83  LLFVLTYLFFNFAFLF 36
           LLF   ++FFN   LF
Sbjct: 180 LLFCCAFIFFNMHLLF 195


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 602 FFASGSDSKNVLLILATTFPGISSTALNTLR 510
           FF++G+D+ ++ L L      ++ T  + LR
Sbjct: 295 FFSAGNDTTSITLALTCYELSLNKTIQDRLR 325


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 204 WCSQTFRNICRADS 245
           WC Q+FR++    S
Sbjct: 483 WCGQSFRSLAEMTS 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,658
Number of Sequences: 336
Number of extensions: 3105
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)