Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27e16
         (616 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457578-1|AAL66025.1|  358|Drosophila melanogaster aFGF intrace...   231   6e-61
AE014296-3223|AAS64970.1|  397|Drosophila melanogaster CG8660-PD...   231   6e-61
AF457577-1|AAL66024.1|  358|Drosophila melanogaster aFGF intrace...   229   2e-60
AY069147-1|AAL39292.1|  315|Drosophila melanogaster GH16593p pro...   169   3e-42
AE014296-3225|AAS64971.1|  315|Drosophila melanogaster CG8660-PC...   169   3e-42
AE014296-3224|AAF49106.1|  315|Drosophila melanogaster CG8660-PB...   169   3e-42
AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p pro...    30   2.9  
AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein...    30   2.9  
AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein...    30   2.9  
AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA...    30   2.9  
AE014296-1226|AAN12051.1| 1130|Drosophila melanogaster CG8601-PB...    29   5.0  
AE014296-1225|AAF50581.2| 1145|Drosophila melanogaster CG8601-PA...    29   5.0  
AY060461-1|AAL25500.1|   80|Drosophila melanogaster SD04019p pro...    28   8.7  
AE014297-2907|AAF55833.2|   80|Drosophila melanogaster CG17278-P...    28   8.7  

>AF457578-1|AAL66025.1|  358|Drosophila melanogaster aFGF
           intracellular binding protein protein.
          Length = 358

 Score =  231 bits (565), Expect = 6e-61
 Identities = 107/173 (61%), Positives = 135/173 (78%)
 Frame = +1

Query: 97  EVDVFVSNYTLIDPEIYQLWIEGCSSSEAVSTLHQRGAAKHLGTSVELIASDVLDHYRTF 276
           +VDVF+SNYT+IDPEIYQLWIEG SSSEAVS L Q+G    +G   +LIASDVLDHYRT+
Sbjct: 3   DVDVFISNYTIIDPEIYQLWIEGFSSSEAVSYLKQKGFGHSMGAPSDLIASDVLDHYRTY 62

Query: 277 ALLERLLTVPSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVIRELLGRKLSSRHRKDLDEV 456
           +L+E  L  P+KL EQ  FQL+ Q + ++ EKYY +DD V RE+LG+KLSSR+RKDLDEV
Sbjct: 63  SLIELYLNAPTKLMEQSCFQLEPQMRDLITEKYYSIDDVVAREILGKKLSSRYRKDLDEV 122

Query: 457 AERSGAPLRCCRRQFDNVRRVFKAVEEMPGNVVANIRSTFLLSDPLAKKYGAV 615
           AE++   L+  RRQFDNV+R+FKAVEEMPG +  NI+  F++S  LAKKY  +
Sbjct: 123 AEKTCVKLKSVRRQFDNVKRIFKAVEEMPGTLTNNIKQHFIISTDLAKKYACI 175


>AE014296-3223|AAS64970.1|  397|Drosophila melanogaster CG8660-PD,
           isoform D protein.
          Length = 397

 Score =  231 bits (565), Expect = 6e-61
 Identities = 107/173 (61%), Positives = 135/173 (78%)
 Frame = +1

Query: 97  EVDVFVSNYTLIDPEIYQLWIEGCSSSEAVSTLHQRGAAKHLGTSVELIASDVLDHYRTF 276
           +VDVF+SNYT+IDPEIYQLWIEG SSSEAVS L Q+G    +G   +LIASDVLDHYRT+
Sbjct: 42  DVDVFISNYTIIDPEIYQLWIEGFSSSEAVSYLKQKGFGHSMGAPSDLIASDVLDHYRTY 101

Query: 277 ALLERLLTVPSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVIRELLGRKLSSRHRKDLDEV 456
           +L+E  L  P+KL EQ  FQL+ Q + ++ EKYY +DD V RE+LG+KLSSR+RKDLDEV
Sbjct: 102 SLIELYLNAPTKLMEQSCFQLEPQMRDLITEKYYSIDDVVAREILGKKLSSRYRKDLDEV 161

Query: 457 AERSGAPLRCCRRQFDNVRRVFKAVEEMPGNVVANIRSTFLLSDPLAKKYGAV 615
           AE++   L+  RRQFDNV+R+FKAVEEMPG +  NI+  F++S  LAKKY  +
Sbjct: 162 AEKTCVKLKSVRRQFDNVKRIFKAVEEMPGTLTNNIKQHFIISTDLAKKYACI 214


>AF457577-1|AAL66024.1|  358|Drosophila melanogaster aFGF
           intracellular binding protein protein.
          Length = 358

 Score =  229 bits (560), Expect = 2e-60
 Identities = 106/173 (61%), Positives = 134/173 (77%)
 Frame = +1

Query: 97  EVDVFVSNYTLIDPEIYQLWIEGCSSSEAVSTLHQRGAAKHLGTSVELIASDVLDHYRTF 276
           +VDVF+SNY +IDPEIYQLWIEG SSSEAVS L Q+G    +G   +LIASDVLDHYRT+
Sbjct: 3   DVDVFISNYAIIDPEIYQLWIEGFSSSEAVSYLKQKGFGHSMGAPSDLIASDVLDHYRTY 62

Query: 277 ALLERLLTVPSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVIRELLGRKLSSRHRKDLDEV 456
           +L+E  L  P+KL EQ  FQL+ Q + ++ EKYY +DD V RE+LG+KLSSR+RKDLDEV
Sbjct: 63  SLIELYLNAPTKLMEQSCFQLEPQMRDLITEKYYSIDDVVAREILGKKLSSRYRKDLDEV 122

Query: 457 AERSGAPLRCCRRQFDNVRRVFKAVEEMPGNVVANIRSTFLLSDPLAKKYGAV 615
           AE++   L+  RRQFDNV+R+FKAVEEMPG +  NI+  F++S  LAKKY  +
Sbjct: 123 AEKTCVKLKSVRRQFDNVKRIFKAVEEMPGTLTNNIKQHFIISTDLAKKYACI 175


>AY069147-1|AAL39292.1|  315|Drosophila melanogaster GH16593p
           protein.
          Length = 315

 Score =  169 bits (411), Expect = 3e-42
 Identities = 77/132 (58%), Positives = 101/132 (76%)
 Frame = +1

Query: 220 LGTSVELIASDVLDHYRTFALLERLLTVPSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVI 399
           +G   +LIASDVLDHYRT++L+E  L  P+KL EQ  FQL+ Q + ++ EKYY +DD V 
Sbjct: 1   MGAPSDLIASDVLDHYRTYSLIELYLNAPTKLMEQSCFQLEPQMRDLITEKYYSIDDVVA 60

Query: 400 RELLGRKLSSRHRKDLDEVAERSGAPLRCCRRQFDNVRRVFKAVEEMPGNVVANIRSTFL 579
           RE+LG+KLSSR+RKDLDEVAE++   L+  RRQFDNV+R+FKAVEEMPG +  NI+  F+
Sbjct: 61  REILGKKLSSRYRKDLDEVAEKTCVKLKSVRRQFDNVKRIFKAVEEMPGTLTNNIKQHFI 120

Query: 580 LSDPLAKKYGAV 615
           +S  LAKKY  +
Sbjct: 121 ISTDLAKKYACI 132


>AE014296-3225|AAS64971.1|  315|Drosophila melanogaster CG8660-PC,
           isoform C protein.
          Length = 315

 Score =  169 bits (411), Expect = 3e-42
 Identities = 77/132 (58%), Positives = 101/132 (76%)
 Frame = +1

Query: 220 LGTSVELIASDVLDHYRTFALLERLLTVPSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVI 399
           +G   +LIASDVLDHYRT++L+E  L  P+KL EQ  FQL+ Q + ++ EKYY +DD V 
Sbjct: 1   MGAPSDLIASDVLDHYRTYSLIELYLNAPTKLMEQSCFQLEPQMRDLITEKYYSIDDVVA 60

Query: 400 RELLGRKLSSRHRKDLDEVAERSGAPLRCCRRQFDNVRRVFKAVEEMPGNVVANIRSTFL 579
           RE+LG+KLSSR+RKDLDEVAE++   L+  RRQFDNV+R+FKAVEEMPG +  NI+  F+
Sbjct: 61  REILGKKLSSRYRKDLDEVAEKTCVKLKSVRRQFDNVKRIFKAVEEMPGTLTNNIKQHFI 120

Query: 580 LSDPLAKKYGAV 615
           +S  LAKKY  +
Sbjct: 121 ISTDLAKKYACI 132


>AE014296-3224|AAF49106.1|  315|Drosophila melanogaster CG8660-PB,
           isoform B protein.
          Length = 315

 Score =  169 bits (411), Expect = 3e-42
 Identities = 77/132 (58%), Positives = 101/132 (76%)
 Frame = +1

Query: 220 LGTSVELIASDVLDHYRTFALLERLLTVPSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVI 399
           +G   +LIASDVLDHYRT++L+E  L  P+KL EQ  FQL+ Q + ++ EKYY +DD V 
Sbjct: 1   MGAPSDLIASDVLDHYRTYSLIELYLNAPTKLMEQSCFQLEPQMRDLITEKYYSIDDVVA 60

Query: 400 RELLGRKLSSRHRKDLDEVAERSGAPLRCCRRQFDNVRRVFKAVEEMPGNVVANIRSTFL 579
           RE+LG+KLSSR+RKDLDEVAE++   L+  RRQFDNV+R+FKAVEEMPG +  NI+  F+
Sbjct: 61  REILGKKLSSRYRKDLDEVAEKTCVKLKSVRRQFDNVKRIFKAVEEMPGTLTNNIKQHFI 120

Query: 580 LSDPLAKKYGAV 615
           +S  LAKKY  +
Sbjct: 121 ISTDLAKKYACI 132


>AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p
           protein.
          Length = 1422

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
 Frame = +1

Query: 133 DPEIYQLWIEGCSSSEAVSTLHQRGA---AKHLGTSVELIASDVLDHYRTFALLERLLTV 303
           DPE+    ++  S+S   +   + G    AKH G + E  A ++ D+Y+   + +  +  
Sbjct: 103 DPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEITQESIG- 161

Query: 304 PSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVIRELLGRK 420
           P++L +Q +      T  ++    Y +   + +E L RK
Sbjct: 162 PTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRK 200


>AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein
           protein.
          Length = 1827

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
 Frame = +1

Query: 133 DPEIYQLWIEGCSSSEAVSTLHQRGA---AKHLGTSVELIASDVLDHYRTFALLERLLTV 303
           DPE+    ++  S+S   +   + G    AKH G + E  A ++ D+Y+   + +  +  
Sbjct: 508 DPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEITQESIG- 566

Query: 304 PSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVIRELLGRK 420
           P++L +Q +      T  ++    Y +   + +E L RK
Sbjct: 567 PTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRK 605


>AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein
           protein.
          Length = 1831

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
 Frame = +1

Query: 133 DPEIYQLWIEGCSSSEAVSTLHQRGA---AKHLGTSVELIASDVLDHYRTFALLERLLTV 303
           DPE+    ++  S+S   +   + G    AKH G + E  A ++ D+Y+   + +  +  
Sbjct: 512 DPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEITQESIG- 570

Query: 304 PSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVIRELLGRK 420
           P++L +Q +      T  ++    Y +   + +E L RK
Sbjct: 571 PTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRK 609


>AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA
           protein.
          Length = 1831

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
 Frame = +1

Query: 133 DPEIYQLWIEGCSSSEAVSTLHQRGA---AKHLGTSVELIASDVLDHYRTFALLERLLTV 303
           DPE+    ++  S+S   +   + G    AKH G + E  A ++ D+Y+   + +  +  
Sbjct: 512 DPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQRNEITQESIG- 570

Query: 304 PSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVIRELLGRK 420
           P++L +Q +      T  ++    Y +   + +E L RK
Sbjct: 571 PTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRK 609


>AE014296-1226|AAN12051.1| 1130|Drosophila melanogaster CG8601-PB,
           isoform B protein.
          Length = 1130

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 262 HYRTFALLERLLTVPSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVIRELLGRKLSS 429
           H   +A LER    P KL E+++ +LDE  K  L+      DD+V+  ++  + SS
Sbjct: 334 HELVYAELERYYGDPQKLEEEVMQELDELEK--LVADNMIEDDSVVINIVEAESSS 387


>AE014296-1225|AAF50581.2| 1145|Drosophila melanogaster CG8601-PA,
           isoform A protein.
          Length = 1145

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 262 HYRTFALLERLLTVPSKLTEQMIFQLDEQTKHMLIEKYYDLDDAVIRELLGRKLSS 429
           H   +A LER    P KL E+++ +LDE  K  L+      DD+V+  ++  + SS
Sbjct: 334 HELVYAELERYYGDPQKLEEEVMQELDELEK--LVADNMIEDDSVVINIVEAESSS 387


>AY060461-1|AAL25500.1|   80|Drosophila melanogaster SD04019p
           protein.
          Length = 80

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 210 SQTFRNICRADSQRCTRSLQNFCI 281
           +Q +R+IC AD +  T++ +N C+
Sbjct: 36  TQEYRSICAADDKGSTKTYRNLCV 59


>AE014297-2907|AAF55833.2|   80|Drosophila melanogaster CG17278-PA
           protein.
          Length = 80

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 210 SQTFRNICRADSQRCTRSLQNFCI 281
           +Q +R+IC AD +  T++ +N C+
Sbjct: 36  TQEYRSICAADDKGSTKTYRNLCV 59


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,628,346
Number of Sequences: 53049
Number of extensions: 571236
Number of successful extensions: 1746
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1746
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)