Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27e16
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   3.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   5.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.2  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = +1

Query: 337 LDE--QTKHMLIEKYYDL 384
           LDE  Q KHMLIE Y +L
Sbjct: 274 LDEFPQPKHMLIEAYTNL 291


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 469 PSVPPPHLNLFCVWRITSF 413
           P  P P+    C W ITS+
Sbjct: 59  PRYPLPYSGSKCTWTITSY 77


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = +1

Query: 337 LDE--QTKHMLIEKYYDL 384
           LDE  Q KHMLIE Y +L
Sbjct: 274 LDEFPQPKHMLIEAYTNL 291


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/41 (21%), Positives = 22/41 (53%)
 Frame = +1

Query: 325 MIFQLDEQTKHMLIEKYYDLDDAVIRELLGRKLSSRHRKDL 447
           M+  + E +   +  K+Y + D + R++LG     +++ +L
Sbjct: 363 MLGNVIEGSSDSINTKFYGMYDILARDILGYNFDFQNKNNL 403


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = +1

Query: 325 MIFQLDEQTKHMLIEKYYDLDDAVIRELLGRKLSSRHRKDL 447
           M+  + E     +  K+Y + D + R++LG     +++ +L
Sbjct: 363 MLGNVIEGNSDSINTKFYGMYDILARDILGYNFDFQNKNNL 403


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 210 SQTFRNICRADSQRCTRSL 266
           S   + +C+ D+Q C R L
Sbjct: 664 SSNNKTLCKCDAQNCRRYL 682


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,724
Number of Sequences: 438
Number of extensions: 3833
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)