Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27e06
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 244 2e-65
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 244 2e-65
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 244 2e-65
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 244 2e-65
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 244 2e-65
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 244 2e-65
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 243 5e-65
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 241 2e-64
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 237 3e-63
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 205 1e-53
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 5e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 5e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 1e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 6e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 151 2e-37
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 135 2e-32
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 103 8e-23
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 89 2e-18
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 50 8e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 47 6e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 47 6e-06
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.13
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 30 0.68
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 0.89
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 0.89
Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.6
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 4.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 4.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 4.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 4.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 4.8
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 4.8
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 27 8.3
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 27 8.3
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 8.3
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 244 bits (597), Expect = 2e-65
Identities = 110/112 (98%), Positives = 111/112 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLN 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLN
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 244 bits (597), Expect = 2e-65
Identities = 110/112 (98%), Positives = 111/112 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLN 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLN
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 244 bits (597), Expect = 2e-65
Identities = 110/112 (98%), Positives = 111/112 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLN 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLN
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 244 bits (597), Expect = 2e-65
Identities = 110/112 (98%), Positives = 111/112 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLN 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLN
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 244 bits (597), Expect = 2e-65
Identities = 110/112 (98%), Positives = 111/112 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLN 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLN
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 244 bits (597), Expect = 2e-65
Identities = 110/112 (98%), Positives = 111/112 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLN 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLN
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 243 bits (594), Expect = 5e-65
Identities = 109/112 (97%), Positives = 111/112 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLN 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLN
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 241 bits (590), Expect = 2e-64
Identities = 107/112 (95%), Positives = 111/112 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLN 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLN
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 112
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 237 bits (580), Expect = 3e-63
Identities = 106/110 (96%), Positives = 109/110 (99%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLN 449
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+ PEEHPVLLTEAPLN
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLN 111
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 205 bits (501), Expect = 1e-53
Identities = 92/94 (97%), Positives = 93/94 (98%)
Frame = +3
Query: 168 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 347
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 348 NWDDMEKIWHHTFYNELRVXPEEHPVLLTEAPLN 449
NWDDMEKIWHHTFYNELRV PEEHPVLLTEAPLN
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 98
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 5e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKI 371
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 5e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKI 371
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 1e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKI 371
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 6e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDM 362
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 151 bits (366), Expect = 2e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +3
Query: 246 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPV 425
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 426 LLTEAPLN 449
LLTEAPLN
Sbjct: 61 LLTEAPLN 68
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 135 bits (326), Expect = 2e-32
Identities = 57/105 (54%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 317
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 318 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVXPEEHPVLLTEAPLN 449
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLN
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLN 115
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 103 bits (246), Expect = 8e-23
Identities = 52/107 (48%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 311
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 312 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVXPEEHPVLLTEAPLN 449
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLN
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLN 115
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 88.6 bits (210), Expect = 2e-18
Identities = 50/125 (40%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 257
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 258 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLLT 434
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 435 EAPLN 449
E PLN
Sbjct: 121 EPPLN 125
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 50.0 bits (114), Expect = 8e-07
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 296
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 297 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVXPEEHPVLL 431
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 432 TEAPLN 449
+E+ N
Sbjct: 129 SESSWN 134
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 47.2 bits (107), Expect = 6e-06
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +3
Query: 129 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 308
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 309 LTLKYPIEHGIVTNWDDMEKIWHHTF 386
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 47.2 bits (107), Expect = 6e-06
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +3
Query: 129 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 308
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 309 LTLKYPIEHGIVTNWDDMEKIWHHTF 386
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.7 bits (71), Expect = 0.13
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -3
Query: 343 TIPCSMGYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPAL 167
T+ S PL++ +SS S TITP +G+PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 166 HIPEPLSTTNAATSSS 119
+ STT A +++S
Sbjct: 511 TVTASPSTTGATSTAS 526
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 31.9 bits (69), Expect = 0.22
Identities = 27/79 (34%), Positives = 31/79 (39%)
Frame = +2
Query: 209 PLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 388
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 389 Q*AACXPRGTPSPAH*GSP 445
A P G P PA G+P
Sbjct: 246 APGAAGPPGPPGPA--GAP 262
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 0.68
Identities = 26/75 (34%), Positives = 30/75 (40%)
Frame = +2
Query: 221 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 400
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 401 CXPRGTPSPAH*GSP 445
P G P PA G+P
Sbjct: 251 AGPPGPPGPA--GAP 263
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 0.89
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 300 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 145
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 0.89
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 300 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 145
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>Z81122-5|CAB03357.1| 579|Caenorhabditis elegans Hypothetical
protein T13F2.6 protein.
Length = 579
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 2 IPRSELGSLRCTAITKLCNSKLIYLFIIE 88
+P+ E+G L CT I C ++ I+ F IE
Sbjct: 156 LPKREIGRLLCTVIAVQCPTEKIWKFRIE 184
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 168 KAGFAGDDAPRAVFPSIVGRPRHQG 242
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 218 RGKAPPSGRDGRYGTEG 268
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 193 ASSPAKPALHIPEPLSTTNAATSS 122
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 193 ASSPAKPALHIPEPLSTTNAATSS 122
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 193 ASSPAKPALHIPEPLSTTNAATSS 122
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 193 ASSPAKPALHIPEPLSTTNAATSS 122
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 353 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 243
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 385 STMSCVSPPRNTQSCSLRLP 444
ST C SP +TQ+C RLP
Sbjct: 297 STQVCASPLNSTQTCIPRLP 316
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 385 STMSCVSPPRNTQSCSLRLP 444
ST C SP +TQ+C RLP
Sbjct: 297 STQVCASPLNSTQTCIPRLP 316
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 8.3
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 222 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 386
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = -3
Query: 376 CQIFSMSSQLVTIPC-SMGYLRVRIPL----LLCASSPT*ESFCPIP 251
CQ+FS QLVT+ SMG +++++ + LL + S T + P P
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNP 297
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 8.3
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 222 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 386
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,208,425
Number of Sequences: 27780
Number of extensions: 249545
Number of successful extensions: 919
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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