Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27e03
(508 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41684 Cluster: Probable endochitinase precursor; n=35;... 332 2e-90
UniRef50_O10363 Cluster: Probable endochitinase precursor; n=42;... 254 8e-67
UniRef50_P07254 Cluster: Chitinase A precursor; n=36; root|Rep: ... 163 3e-39
UniRef50_UPI00015C55BD Cluster: hypothetical protein CKO_02217; ... 136 4e-31
UniRef50_P32823 Cluster: Chitinase A precursor; n=85; Bacteria|R... 113 2e-24
UniRef50_A6FBZ7 Cluster: Exochitinase; n=1; Moritella sp. PE36|R... 103 2e-21
UniRef50_Q7MGC4 Cluster: Chitinase; n=2; Vibrio|Rep: Chitinase -... 100 2e-20
UniRef50_Q9RQJ3 Cluster: Chitinase; n=3; root|Rep: Chitinase - A... 54 2e-06
UniRef50_Q0BFT7 Cluster: Chitinase precursor; n=68; cellular org... 49 5e-05
UniRef50_Q2SCY7 Cluster: Chitinase; n=14; Bacteria|Rep: Chitinas... 39 0.057
UniRef50_Q7PC53 Cluster: Chitinase B; n=3; Bacteria|Rep: Chitina... 38 0.13
UniRef50_A0NCS1 Cluster: ENSANGP00000030143; n=1; Anopheles gamb... 36 0.40
UniRef50_A5GNH9 Cluster: Beta-glycosidase of family GH18; possib... 34 1.6
UniRef50_Q45ZT6 Cluster: Recombination activating protein 1-like... 34 1.6
UniRef50_Q09541 Cluster: Putative subtilase-type proteinase F21H... 34 2.1
UniRef50_UPI0000DA2443 Cluster: PREDICTED: similar to dual oxida... 33 3.7
UniRef50_Q6BP93 Cluster: Debaryomyces hansenii chromosome E of s... 33 4.9
UniRef50_A6EXV1 Cluster: Transcriptional regulator, IclR family ... 32 6.5
UniRef50_Q2CJN4 Cluster: Aminomethyl transferase family protein;... 32 8.6
UniRef50_A7B4B0 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_A7A4P8 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_A0YJW5 Cluster: Sensor protein; n=1; Lyngbya sp. PCC 81... 32 8.6
>UniRef50_P41684 Cluster: Probable endochitinase precursor; n=35;
root|Rep: Probable endochitinase precursor - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 551
Score = 332 bits (817), Expect = 2e-90
Identities = 152/164 (92%), Positives = 159/164 (96%)
Frame = +3
Query: 15 MLYKLLNVLWLVVAVSNAIPGTPVIDWAERNYALVKINYEATAYENLIKLKEQVDVHVSW 194
MLYKLLNVLWLV AVSNAIPGTPVIDWA+RNYALV+INYEATAYENLIK KEQVDV VSW
Sbjct: 1 MLYKLLNVLWLV-AVSNAIPGTPVIDWADRNYALVEINYEATAYENLIKPKEQVDVQVSW 59
Query: 195 NVWNGDIGDIAYVFFDEQQVWKGDADSKRATINVIVSGQFNMRVKLCNEDGCSISDPVLV 374
NVWNGDIGDIAYV FDEQQVWKGDA+SKRATI V+VSGQFNMRVKLCNEDGCS+SDPVLV
Sbjct: 60 NVWNGDIGDIAYVLFDEQQVWKGDAESKRATIKVLVSGQFNMRVKLCNEDGCSVSDPVLV 119
Query: 375 KIADTDGGHLAPLEYTWLENNKPGRREDKIVAAYFVEWGVYGRS 506
K+ADTDGGHLAPLEYTWLENNKPGRREDKIVAAYFVEWGVYGR+
Sbjct: 120 KVADTDGGHLAPLEYTWLENNKPGRREDKIVAAYFVEWGVYGRN 163
>UniRef50_O10363 Cluster: Probable endochitinase precursor; n=42;
root|Rep: Probable endochitinase precursor - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 550
Score = 254 bits (622), Expect = 8e-67
Identities = 115/163 (70%), Positives = 136/163 (83%)
Frame = +3
Query: 15 MLYKLLNVLWLVVAVSNAIPGTPVIDWAERNYALVKINYEATAYENLIKLKEQVDVHVSW 194
ML+ L +LWL AV++A PGTPVIDWA+RNYALV +N EATAYENL++ K V V VSW
Sbjct: 1 MLHYLATILWL--AVAHASPGTPVIDWADRNYALVSVNSEATAYENLVERKAGVSVPVSW 58
Query: 195 NVWNGDIGDIAYVFFDEQQVWKGDADSKRATINVIVSGQFNMRVKLCNEDGCSISDPVLV 374
NVWNG +GD+AYV F+E QVWKG A +KRATI+V SGQFNMRVKLC++DG S+S+PV V
Sbjct: 59 NVWNGGVGDMAYVLFNENQVWKGAAAAKRATIDVSKSGQFNMRVKLCDDDGFSVSEPVTV 118
Query: 375 KIADTDGGHLAPLEYTWLENNKPGRREDKIVAAYFVEWGVYGR 503
++ADTDGGHL+PLEY W ENNKPGR +K VAAYFVEWGVYGR
Sbjct: 119 RVADTDGGHLSPLEYAWGENNKPGRPHNKTVAAYFVEWGVYGR 161
>UniRef50_P07254 Cluster: Chitinase A precursor; n=36; root|Rep:
Chitinase A precursor - Serratia marcescens
Length = 563
Score = 163 bits (395), Expect = 3e-39
Identities = 77/168 (45%), Positives = 103/168 (61%), Gaps = 3/168 (1%)
Frame = +3
Query: 12 KMLYKLLNVLWLVVAVSNAIPGTPVIDWAERNYALVKINYEATAYENLIKLKEQVDVHVS 191
K L LL L A A PG P I W +A+V+++ ATAY NL+K+K DV VS
Sbjct: 6 KPLLALLIGSTLCSAAQAAAPGKPTIAWGNTKFAIVEVDQAATAYNNLVKVKNAADVSVS 65
Query: 192 WNVWNGDIGDIAYVFFDEQQVWKGDADSKRATINVIVS--GQFNMRVKLCNEDGCSISDP 365
WN+WNGD G A + + ++ W G + T N V+ G++ M+V LCN DGC+ SD
Sbjct: 66 WNLWNGDAGTTAKILLNGKEAWSGPSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDA 125
Query: 366 VLVKIADTDGGHLAPLEYTWLENNKPGRRED-KIVAAYFVEWGVYGRS 506
+ +ADTDG HLAPL+ LE NKP ++ K+V +YFVEWGVYGR+
Sbjct: 126 TEIVVADTDGSHLAPLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYGRN 173
>UniRef50_UPI00015C55BD Cluster: hypothetical protein CKO_02217;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_02217 - Citrobacter koseri ATCC BAA-895
Length = 902
Score = 136 bits (328), Expect = 4e-31
Identities = 73/169 (43%), Positives = 95/169 (56%), Gaps = 3/169 (1%)
Frame = +3
Query: 9 IKMLYKLLNVLWLVVAVSNAIPGTPVIDWAERNYALVKINYEATAYENLIKL-KEQVDVH 185
+K Y L V V A PGTP I +A+V+++ A Y NL+K+ + VDV
Sbjct: 4 MKPKYLALFVAAATSPVFAAAPGTPSITSGNDKFAIVEVDQAAQDYNNLVKVHNDGVDVK 63
Query: 186 VSWNVWNGDIGDIAYVFFDEQQVWKGDADSK-RATINVIVSGQFNMRVKLCNEDGCSISD 362
V WNVW+GD A V D + VW G + AT V G++ +V+LCN GC+ S
Sbjct: 64 VEWNVWSGDAPTSAKVLLDGKTVWSGAGSAAGSATFKVKKGGRYQEQVELCNTSGCTKSA 123
Query: 363 PVLVKIADTDGGHLAPLEYTWLENNKP-GRREDKIVAAYFVEWGVYGRS 506
L+ +ADTDG HL PL T ENNK + DK+V AYF EWGVYGR+
Sbjct: 124 SKLIIVADTDGSHLLPLNTTMKENNKTFAQHTDKVVGAYFPEWGVYGRN 172
>UniRef50_P32823 Cluster: Chitinase A precursor; n=85; Bacteria|Rep:
Chitinase A precursor - Alteromonas sp. (strain O-7)
Length = 820
Score = 113 bits (273), Expect = 2e-24
Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 6/153 (3%)
Frame = +3
Query: 66 AIPGTPVIDWAERNYALVKINYEAT-AYENLIKLKEQVDVHVSWNVWNGDIGDIAYVFFD 242
A P TP +DW + Y+ V++N + +Y+ L+K K+ VD+ + WN W+G GD V+FD
Sbjct: 21 AAPSTPTLDWQPQQYSFVEVNVDGLGSYKQLVKAKDVVDISIKWNAWSGSGGDNYKVYFD 80
Query: 243 EQQVWKGD--ADSKRATIN--VIVSGQFNMRVKLCNEDGCSISDPVLVKIADTDGGHLAP 410
+ V +G A +K + SG+ + ++LC C+ S + IADTDG HLAP
Sbjct: 81 DLLVNQGSLPAGTKSGVVQFPYTKSGRHQLYLELCEGTVCARSAGKEIVIADTDGAHLAP 140
Query: 411 LEYTWLENNK-PGRREDKIVAAYFVEWGVYGRS 506
L NN+ G ++ AYFVEWG+YGR+
Sbjct: 141 LPMNVDPNNRNNGTIPGRVTGAYFVEWGIYGRN 173
>UniRef50_A6FBZ7 Cluster: Exochitinase; n=1; Moritella sp. PE36|Rep:
Exochitinase - Moritella sp. PE36
Length = 799
Score = 103 bits (248), Expect = 2e-21
Identities = 64/169 (37%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Frame = +3
Query: 9 IKMLYKLLNVLWLVVAVSNAIPGTPVIDWAERN-YALVKINYEAT-AYENLIKLKEQVDV 182
+K KL V + V A P P I WA+ + + IN +A +Y+++ + V+V
Sbjct: 6 LKSSLKLAIVAAISAPVLAAAPQAPSIAWADYSKLGFITINTDAVVSYKDMYTRVDVVEV 65
Query: 183 HVSWNVWNGDIGDIAYVFFDEQQVWKGDADSKRATINVIVSGQFNMRVKLCNEDGCSISD 362
VSWNVW+GD V + + + G K ++ G +M V+LCN DGCS S
Sbjct: 66 PVSWNVWSGDKATKWEVEVNGEIMMSGSGTGKSTVLSFTEGGLKDMVVRLCNADGCSESA 125
Query: 363 PVLVKIADTDGGHL-APLEYTWLENNKP-GRREDKIVAAYFVEWGVYGR 503
+ I+DTDG HL A L T N P +++D IV YFVEWGVYGR
Sbjct: 126 TTELLISDTDGSHLKADLPMTTDPANTPYAQQKDNIVGTYFVEWGVYGR 174
>UniRef50_Q7MGC4 Cluster: Chitinase; n=2; Vibrio|Rep: Chitinase -
Vibrio vulnificus (strain YJ016)
Length = 282
Score = 100 bits (239), Expect = 2e-20
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Frame = +3
Query: 66 AIPGTPVIDWAERN---YALVKINYEATA-YENLIKLKEQVDVHVSWNVWNGDIGDIAYV 233
A P P ID N ++ +++ E TA Y ++K +Q + V +N W+G+ GD +
Sbjct: 45 AAPTAPSIDLYGSNNLQFSKIELAMETTAGYNQMVKYHDQATISVKFNQWSGNTGDTYNI 104
Query: 234 FFDEQQVWKGDADSKR--ATINVIVSGQFNMRVKLCNEDGCSISDPVLVKIADTDGGHLA 407
+FD +V G + AT G + M ++ C+ GC+ S P + IADTDG HL
Sbjct: 105 YFDGVKVASGPISGSQTAATFQYGKGGLYQMEIEACDATGCAKSAPAEITIADTDGSHLK 164
Query: 408 PLEYTWLENNKPGRREDK-IVAAYFVEWGVYGRS 506
PL NNK + +V YFVEWG+YGR+
Sbjct: 165 PLTMNVDPNNKSYNTDPSLVVGTYFVEWGIYGRN 198
>UniRef50_Q9RQJ3 Cluster: Chitinase; n=3; root|Rep: Chitinase -
Aeromonas hydrophila
Length = 862
Score = 53.6 bits (123), Expect = 2e-06
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +3
Query: 66 AIPGTPVIDWAERNYALVKINYEATAYENLIKLKEQVDVHVSWNVWNGDIG 218
A PG P I W E +A++ ++ AT+Y L+ + + V V+WN+W+ D+G
Sbjct: 24 AAPGKPTIGWGETKFAIIHVDQAATSYNKLVTVHKTRPVSVTWNLWSRDVG 74
>UniRef50_Q0BFT7 Cluster: Chitinase precursor; n=68; cellular
organisms|Rep: Chitinase precursor - Burkholderia
cepacia (strain ATCC 53795 / AMMD)
Length = 972
Score = 49.2 bits (112), Expect = 5e-05
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Frame = +3
Query: 66 AIPGTPVIDWAE---RNYALVKINYEATA---YENLIKLKEQVDVHVSWNVW-NGD-IGD 221
A PG P + E + + V+I+ + Y++L+KL ++VDV + +++W NG +
Sbjct: 45 AAPGKPSLKQYEITSQPHGFVEIDLQKAGVAPYKDLVKLNKKVDVPLPFDIWSNGTAVKA 104
Query: 222 IAYVF-----FDEQQVWKGDADSKRATINVIVSGQFNMRVKLCNEDGCSI-SDPVLVKIA 383
+A V E ++ G S NV G M+V++ + +G S S P+ V +
Sbjct: 105 VAVVNGVVDPASEVKMTPGGTQSGEVIANVKTPGVKKMQVRVIDANGASTDSAPLDVVVF 164
Query: 384 DTDGGHLAPLEYTWLENNKP-GRREDKIVAAYFVEWGVYGR 503
DT L +N+KP +V YF W +Y R
Sbjct: 165 DTISELADDLPNNASKNHKPYANTSGSVVGTYFATWSIYDR 205
>UniRef50_Q2SCY7 Cluster: Chitinase; n=14; Bacteria|Rep: Chitinase -
Hahella chejuensis (strain KCTC 2396)
Length = 674
Score = 39.1 bits (87), Expect = 0.057
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = +3
Query: 390 DGGHLAPLEYT-W----LENNKPGRRED-KIVAAYFVEWGVYGRS 506
D G P++ T W +ENNKP + +V YFVEWGVYGR+
Sbjct: 238 DNGSDDPIDTTGWPKPLMENNKPYQNTTGSVVGTYFVEWGVYGRN 282
>UniRef50_Q7PC53 Cluster: Chitinase B; n=3; Bacteria|Rep: Chitinase
B - Saccharophagus degradans (strain 2-40 / ATCC 43961 /
DSM 17024)
Length = 1271
Score = 37.9 bits (84), Expect = 0.13
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 432 NNKPGRREDKIVAAYFVEWGVYGR 503
NN + DKI+ YFVEWG+YGR
Sbjct: 851 NNTYKQTSDKIIVTYFVEWGIYGR 874
Score = 33.5 bits (73), Expect = 2.8
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +3
Query: 141 AYENLIKLKEQVDVHVSWNVWNGDIGDIAYVFFDEQQVWKGD-------ADSKRATINVI 299
A+ N V V ++WN++ G G+ ++ D +QV+ + A + I +
Sbjct: 691 AWMNTSYTGSSVTVTITWNMYWGTNGNQWQLWLDGEQVYSANLTTNGQNAQTDSKIITIT 750
Query: 300 VSGQFNMRVKLCNEDGCSIS 359
+G ++ VKLCN+ ++S
Sbjct: 751 GAGAHSVEVKLCNQQDINVS 770
>UniRef50_A0NCS1 Cluster: ENSANGP00000030143; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000030143 - Anopheles gambiae
str. PEST
Length = 313
Score = 36.3 bits (80), Expect = 0.40
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = -1
Query: 271 SASPFHTCCSSKNTYAMSPMSPFHTFQLT*TSTCSLSFIKF 149
S+S FH CCS +S HT T T TCSLSF F
Sbjct: 38 SSSSFHLCCSPPVVLRSLALSLSHTHTHTHTHTCSLSFGSF 78
>UniRef50_A5GNH9 Cluster: Beta-glycosidase of family GH18; possible
chitinase; modular; contains two N-terminal
carbohydrate-binding modules of family CBM2; n=1;
Synechococcus sp. WH 7803|Rep: Beta-glycosidase of
family GH18; possible chitinase; modular; contains two
N-terminal carbohydrate-binding modules of family CBM2 -
Synechococcus sp. (strain WH7803)
Length = 1050
Score = 34.3 bits (75), Expect = 1.6
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 363 PVLVKIADTDGGHLAPLEYTWLENNKPGRREDKIVAAYFVEWGVYGR 503
PV + T+GG + ++ +P DK V YF EWG+YGR
Sbjct: 573 PVTQGVPVTEGGTVT------IDYERPNGTTDKRVVTYFEEWGIYGR 613
>UniRef50_Q45ZT6 Cluster: Recombination activating protein 1-like;
n=1; Strongylocentrotus purpuratus|Rep: Recombination
activating protein 1-like - Strongylocentrotus
purpuratus (Purple sea urchin)
Length = 983
Score = 34.3 bits (75), Expect = 1.6
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -1
Query: 397 PPSVSAILTNTGSLMEQPSSLQSLTRMLNCPLTITLMVALLLSASPF--HTCCSSKNTYA 224
PP+ +A LT T + P++ LT PLT T L +A+ T +S A
Sbjct: 221 PPTATAPLTPTATAPLTPTATAPLTPTATAPLTPTATAPLTPTATALLTPTATASLTPTA 280
Query: 223 MSPMSPFHTFQLT*TST 173
+P+ P T LT T+T
Sbjct: 281 TAPLPPTATALLTPTAT 297
>UniRef50_Q09541 Cluster: Putative subtilase-type proteinase F21H12.6;
n=2; Caenorhabditis|Rep: Putative subtilase-type
proteinase F21H12.6 - Caenorhabditis elegans
Length = 1374
Score = 33.9 bits (74), Expect = 2.1
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +3
Query: 123 INYEATAYENLIKLKEQVDVHVSWNVWNGDIGDIAYVFFDEQQVWKGDADSKRATI---N 293
IN ++ YE L EQ+D VS + D F+ + VW D+K A I +
Sbjct: 1249 INKKSEGYEALKSKSEQIDATVSEELKKLDSNWTGNQFYVKLLVWLSADDTKTALISAKH 1308
Query: 294 VIVSGQFNMRVKLCNEDG 347
GQF KL N+ G
Sbjct: 1309 AAALGQFGRCAKLLNKAG 1326
>UniRef50_UPI0000DA2443 Cluster: PREDICTED: similar to dual oxidase
1; n=1; Rattus norvegicus|Rep: PREDICTED: similar to
dual oxidase 1 - Rattus norvegicus
Length = 1501
Score = 33.1 bits (72), Expect = 3.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 358 AIPCWSKSQTPTA----VIWRRSNTHGWKTTNPAEERIKLSLRTLSSG 489
A PC S+S T + WRR+ H WKT+ R+ + R+ S G
Sbjct: 649 AAPCCSRSPRSTTWCCCLTWRRNGRHWWKTSGQLXRRMDXASRSGSXG 696
>UniRef50_Q6BP93 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 678
Score = 32.7 bits (71), Expect = 4.9
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1
Query: 82 GVPGIALETATTNHKTFNNLYNILICL 2
G+PGI L+TA K FNNL +LI L
Sbjct: 231 GIPGIGLKTAFNLVKRFNNLEKVLIAL 257
>UniRef50_A6EXV1 Cluster: Transcriptional regulator, IclR family
protein; n=1; Marinobacter algicola DG893|Rep:
Transcriptional regulator, IclR family protein -
Marinobacter algicola DG893
Length = 269
Score = 32.3 bits (70), Expect = 6.5
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 111 ALVKINYEATAYENLIKLKEQVDVHVSWNVWNGDIGDIAYVFFDEQQ 251
AL +IN +YE + +L E+ D VS VWNG+ G + + D Q
Sbjct: 81 ALRRINPIQLSYEAVDRLNEETDKTVSVTVWNGN-GPLIIKWLDSSQ 126
>UniRef50_Q2CJN4 Cluster: Aminomethyl transferase family protein;
n=1; Oceanicola granulosus HTCC2516|Rep: Aminomethyl
transferase family protein - Oceanicola granulosus
HTCC2516
Length = 365
Score = 31.9 bits (69), Expect = 8.6
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 324 VKLCNEDGCSISDPVLVKIAD 386
V LC+ DG I+DPVL+K+AD
Sbjct: 95 VPLCDHDGWLINDPVLLKLAD 115
>UniRef50_A7B4B0 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 250
Score = 31.9 bits (69), Expect = 8.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 69 IPGTPVIDWAERNYALVKINYEATAYEN 152
+PG + +W E NY + ++N+ AYEN
Sbjct: 33 LPGYEIREWNEDNYDVTQVNFVKEAYEN 60
>UniRef50_A7A4P8 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 291
Score = 31.9 bits (69), Expect = 8.6
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 258 KGDADSKRATINVIVSGQFNMRVKLCNEDGCSISDPVLVKIADTDGGHLAPLEYTWLENN 437
KG+ D+ +AT+N I S N+++K +I L + +T L P Y+W +
Sbjct: 178 KGEVDATKATVNDIASNPKNLKIK-------TIDAAQLARSLNTVDVALVPGNYSWAADL 230
Query: 438 KP 443
KP
Sbjct: 231 KP 232
>UniRef50_A0YJW5 Cluster: Sensor protein; n=1; Lyngbya sp. PCC
8106|Rep: Sensor protein - Lyngbya sp. PCC 8106
Length = 1254
Score = 31.9 bits (69), Expect = 8.6
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 385 TPTAVIWRRS-NTHGWKTTNPAEERIKLSLRTLSSG 489
TPT VI + TH W + PA+E++K ++ T +SG
Sbjct: 292 TPTDVIGKPLWETHWWHPSTPAQEQLKQAVATAASG 327
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,162,563
Number of Sequences: 1657284
Number of extensions: 10546945
Number of successful extensions: 33317
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 32252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33295
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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