Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27d23
         (338 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   0.65 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   1.5  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   1.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   3.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   3.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   4.6  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   4.6  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.6  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   6.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   6.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   6.0  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.4 bits (48), Expect = 0.65
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 71  TECQCHSDYLSFLIQIITNG 12
           T+C+  SD L  L +I+TNG
Sbjct: 198 TQCEIVSDTLRNLDKIVTNG 217


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -1

Query: 242 R*DTKSTTK*WYINLFDNLFVIKDLITRSEGQCHFVTFGS 123
           R DT++     +I++F + +V   +  R+  + H V  GS
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQVFARAREEAHIVPEGS 173



 Score = 20.2 bits (40), Expect = 6.0
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = +1

Query: 55  WHWHSV 72
           WHWH V
Sbjct: 208 WHWHLV 213


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 192 VKQIDVPSFSGAFGILPKHVPTL 260
           V    +PS S + G LPK +P L
Sbjct: 196 VSPASLPSISPSGGFLPKWLPPL 218


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 54  MALAFRGVIRNVARRLQVRN 113
           ++ +  G++ NVA+ LQ+ N
Sbjct: 744 LSKSLEGLLENVAQYLQIEN 763


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 206 INLFDNLFVIKDLITRSEGQCHFVTFGSI-CIVTYL 102
           ++LFD LF    L   + G+  FVT   I C + +L
Sbjct: 261 VSLFDVLFQAYYLYYVATGKASFVTVPMIVCPIVWL 296


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 206 INLFDNLFVIKDLITRSEGQCHFVTFGSI-CIVTYL 102
           ++LFD LF    L   + G+  FVT   I C + +L
Sbjct: 261 VSLFDVLFQAYYLYYVATGKASFVTVPMIVCPIVWL 296


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 189 LVCHKRPYYPQRRSMPFRHLWE 124
           L  +++PY  Q++S P +  W+
Sbjct: 38  LYTYRQPYPRQKKSHPPQWTWQ 59


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 110 TYLKPTSYISDYTTECQCH-SDYLSF-LIQIITNGN 9
           T+L P SYI   +T  + H  ++ S     I++NGN
Sbjct: 192 TFLIPRSYIPPLSTSMRSHLCNWGSANSTNIVSNGN 227


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 110 TYLKPTSYISDYTTECQCH-SDYLSF-LIQIITNGN 9
           T+L P SYI   +T  + H  ++ S     I++NGN
Sbjct: 352 TFLIPRSYIPPLSTSMRSHLCNWGSANSTNIVSNGN 387


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 110 TYLKPTSYISDYTTECQCH-SDYLSF-LIQIITNGN 9
           T+L P SYI   +T  + H  ++ S     I++NGN
Sbjct: 352 TFLIPRSYIPPLSTSMRSHLCNWGSANSTNIVSNGN 387


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = +1

Query: 55  WHWHSV 72
           WHWH V
Sbjct: 208 WHWHLV 213


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -1

Query: 167 ITRSEGQCHFVTFGSICIVTYLKPTSYISDYTT 69
           +++++  C FV     C VT+   +  ++D  T
Sbjct: 37  LSKAKSFCTFVAALVYCSVTFFALSELLTDLAT 69


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 47  NQNGTGIPWCNQKCSSSAS 103
           +Q  +   WCN    SSAS
Sbjct: 139 HQGFSSSTWCNYSAYSSAS 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,007
Number of Sequences: 336
Number of extensions: 1642
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)