Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27d20
         (374 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    24   2.1  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   3.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.0  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    22   6.5  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    22   8.7  

>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 153 RCKRWVCRSSPI*RGSQTTRTSWCTRCGCS 64
           RC R + R   +     T R+S C RCG +
Sbjct: 235 RCFRCLERGHMVRECQGTNRSSLCIRCGAA 264


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 122 PYDAVHKRLERVGVLAVDVHDWAAAALFSQ 33
           P+D     L   G+  +DV+DW A     Q
Sbjct: 731 PFDERELELLISGISKIDVNDWKANTRLKQ 760


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 87  WCTRCGCS*LGSR 49
           +C  CGC  +GSR
Sbjct: 393 YCINCGCDPVGSR 405


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = -1

Query: 101 RLERVGVLAVDVHDWAAAALFSQTNSVFVV 12
           + E   ++ +D +D+AAA + ++TN +  +
Sbjct: 879 KTEEGALVKLDDYDFAAAFILNETNGLLKI 908


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 177 PLLRQSLCRCKRWVCRSSPI*RGSQTTRTSWCTRCGCS 64
           P  +QS  RC R + R       +   R+S C  CG +
Sbjct: 282 PKQQQSAVRCFRCLERGHTTADCAGEDRSSLCLHCGAA 319


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,960
Number of Sequences: 2352
Number of extensions: 5574
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)