Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27d20
         (374 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    21   3.6  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   3.6  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           21   3.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   4.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   4.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   4.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   6.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   6.3  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   8.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   8.3  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 251 RTSEQRRVWCKLLYFENERN 192
           R    RRV C LL F+ + N
Sbjct: 37  RADRHRRVTCDLLSFKGQVN 56


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 251 RTSEQRRVWCKLLYFENERN 192
           R    RRV C LL F+ + N
Sbjct: 37  RADRHRRVTCDLLSFKGQVN 56


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 251 RTSEQRRVWCKLLYFENERN 192
           R    RRV C LL F+ + N
Sbjct: 12  RADRHRRVTCDLLSFKGQVN 31


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 303 NLTLNKCTNNNV*CFNT 253
           N  LNK T N++ CF T
Sbjct: 551 NSGLNKITRNSLDCFFT 567


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 303 NLTLNKCTNNNV*CFNT 253
           N  LNK T N++ CF T
Sbjct: 551 NSGLNKITRNSLDCFFT 567


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 124 SHMTRFTNDSNELVYSLWMFMIGQPPPFLA 35
           SH    + D N  VY +W+  +    P LA
Sbjct: 575 SHFINHSCDPNLAVYGVWINCLDPNLPKLA 604


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 245 SEQRRVWCKLLYFENER 195
           ++  RVW   L+F NE+
Sbjct: 110 TDASRVWMPDLFFSNEK 126


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 245 SEQRRVWCKLLYFENER 195
           ++  RVW   L+F NE+
Sbjct: 110 TDASRVWMPDLFFSNEK 126


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +3

Query: 12  NNEYXISLAKKGGGCPIMNIHSEYTNSFESFVNRVIWE 125
           +N    S+  + G    + ++  +TNS E+  N  +W+
Sbjct: 188 SNVIIASMQYRVGAFGFLYLNKHFTNSEEAPGNMGLWD 225


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +3

Query: 12  NNEYXISLAKKGGGCPIMNIHSEYTNSFESFVNRVIWE 125
           +N    S+  + G    + ++  +TNS E+  N  +W+
Sbjct: 188 SNVIIASMQYRVGAFGFLYLNKHFTNSEEAPGNMGLWD 225


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,594
Number of Sequences: 438
Number of extensions: 1776
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)