Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27d18
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    27   0.11 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          27   0.15 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    26   0.20 
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    26   0.26 
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    26   0.26 
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    26   0.26 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   9.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   9.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.7  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   9.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -2

Query: 384 LSNTVGTYSSGNSFLVYTYSKQVLPTIPS---PTTVIFNL 274
           LSN   TY   N +L+  +SK  +P +P    P T+++ L
Sbjct: 22  LSNKNNTYLVLNKYLLVKHSKPKMPLLPKTPLPLTLLYKL 61


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 247 RGTHHGNDEEIEDNCCWRWYGWQDLLAICI 336
           RGT  GN+  I+      W+ W  ++ IC+
Sbjct: 457 RGTLEGNNMGIQPYDSLLWHTWMPVMRICV 486


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +3

Query: 348 NFLKNMCPRYLTTMSATSPWMERTXKWRYG 437
           NF +  C RY       +  + +  KWR+G
Sbjct: 543 NFYRKFCARYSAATQDLNKLLRKGEKWRWG 572


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 260 MGTTKRLKITVVGDGMVGKTCLLYVYTR 343
           MG+     + VVG G+VG  C +++  R
Sbjct: 1   MGSNNVNSVIVVGGGLVGSLCAIFMAKR 28


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 260 MGTTKRLKITVVGDGMVGKTCLLYVYTR 343
           MG+     + VVG G+VG  C +++  R
Sbjct: 1   MGSNNVNSVIVVGGGLVGSLCAIFMAKR 28


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 260 MGTTKRLKITVVGDGMVGKTCLLYVYTR 343
           MG+     + VVG G+VG  C +++  R
Sbjct: 1   MGSNNVNSVIVVGGGLVGSLCAIFMAKR 28


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +3

Query: 42  VLNRPAIANIPPSLIRSLYHRDKNN 116
           +L RP     PP+   +    D NN
Sbjct: 129 LLTRPQAKKTPPNQYENFQQYDNNN 153


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +3

Query: 42  VLNRPAIANIPPSLIRSLYHRDKNN 116
           +L RP     PP+   +    D NN
Sbjct: 129 LLTRPQAKKTPPNQYENFQQYDNNN 153


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +3

Query: 42  VLNRPAIANIPPSLIRSLYHRDKNN 116
           +L RP     PP+   +    D NN
Sbjct: 129 LLTRPQAKKTPPNQYENFQQYDNNN 153


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 315 RPACYMYTLEMNFLK 359
           RPA +  TLEM +L+
Sbjct: 35  RPATFADTLEMKYLE 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,820
Number of Sequences: 336
Number of extensions: 3034
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)