Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27d17
(610 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41430 Cluster: Uncharacterized 36.6 kDa protein in EGT... 385 e-106
UniRef50_O10298 Cluster: Uncharacterized 34.6 kDa protein; n=7; ... 122 7e-27
UniRef50_Q77K94 Cluster: Dbp; n=3; Nucleopolyhedrovirus|Rep: Dbp... 95 9e-19
UniRef50_Q80LR8 Cluster: DNA binding protein; n=1; Adoxophyes ho... 84 2e-15
UniRef50_A1YJB7 Cluster: Single-stranded DNA binding protein; n=... 83 7e-15
UniRef50_Q0N472 Cluster: DNA binding protein; n=1; Clanis biline... 81 2e-14
UniRef50_Q9YMS7 Cluster: LdOrf-47; ssDNA binding protein; n=1; L... 69 7e-11
UniRef50_Q8QL79 Cluster: DNA-binding protein DBP; n=2; Nucleopol... 61 2e-08
UniRef50_Q462E4 Cluster: Dna binding protien; n=2; Nucleopolyhed... 51 2e-05
UniRef50_Q9IK76 Cluster: SsDNA binding protein; n=1; Spodoptera ... 45 0.001
UniRef50_Q91EX4 Cluster: ORF81 DBP; n=3; Granulovirus|Rep: ORF81... 42 0.009
UniRef50_Q9PYV4 Cluster: ORF89; n=1; Xestia c-nigrum granuloviru... 36 0.99
UniRef50_A1FXV4 Cluster: TonB-dependent receptor precursor; n=1;... 35 1.7
UniRef50_P54675 Cluster: Phosphatidylinositol 3-kinase 3; n=5; E... 35 1.7
UniRef50_Q57Z48 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_O60019 Cluster: Endo-1,3(4)-beta-glucanase; n=1; Xantho... 34 3.0
UniRef50_Q11TN9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_A2FMG1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q8TFG9 Cluster: Uncharacterized serine/threonine-rich p... 33 7.0
>UniRef50_P41430 Cluster: Uncharacterized 36.6 kDa protein in
EGT-IAP1 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 36.6 kDa
protein in EGT-IAP1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 316
Score = 385 bits (947), Expect = e-106
Identities = 178/191 (93%), Positives = 181/191 (94%), Gaps = 2/191 (1%)
Frame = +3
Query: 42 MATKRKIGD--SSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPSS 215
MATKRKIGD SSSDDNQPKRER E GEDQQLVPYN+ AFNVKHDETGVMCYFTPSS
Sbjct: 1 MATKRKIGDGYSSSDDNQPKRERSEGGEDQQLVPYNSG---AFNVKHDETGVMCYFTPSS 57
Query: 216 VQLEPRELTKMLWQEQMAINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSLHEWEDKLY 395
+QLEP ELTKMLWQEQMAINVKRGNFSILNCSCFEGRFLKNEFCRL+NLNSLHEWEDKLY
Sbjct: 58 IQLEPHELTKMLWQEQMAINVKRGNFSILNCSCFEGRFLKNEFCRLSNLNSLHEWEDKLY 117
Query: 396 PEPDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGDIHK 575
PEPDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGDIHK
Sbjct: 118 PEPDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGDIHK 177
Query: 576 HNNIFGNILPK 608
HNNIFGNIL K
Sbjct: 178 HNNIFGNILQK 188
>UniRef50_O10298 Cluster: Uncharacterized 34.6 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 34.6 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 300
Score = 122 bits (294), Expect = 7e-27
Identities = 69/187 (36%), Positives = 113/187 (60%)
Frame = +3
Query: 42 MATKRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPSSVQ 221
MATKR + ++ KR + ++ QL+PYN G+ F ++ + G + FTP +
Sbjct: 1 MATKR--AHPEDETHESKR----AAQETQLLPYN---GSGFLMQVENDGALRKFTPINAM 51
Query: 222 LEPRELTKMLWQEQMAINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSLHEWEDKLYPE 401
+ L+ WQ + +N + +FS +N + ++LK++F L NL++ +EW + PE
Sbjct: 52 RAQQNLS---WQCLVLLNCQALDFSAINFHYGDLQYLKDKFTELQNLSNYYEWRKQERPE 108
Query: 402 PDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGDIHKHN 581
DK + ++E A GK TYTIG RV+G+P GF ++FG++ R+KS FGQF S + IH+HN
Sbjct: 109 -DK-VCIMEAAVGKCTYTIGLRVKGRPNGFAIAEFGSVHRSKSTFGQFLSTTWSAIHEHN 166
Query: 582 NIFGNIL 602
++FG I+
Sbjct: 167 SVFGKIM 173
>UniRef50_Q77K94 Cluster: Dbp; n=3; Nucleopolyhedrovirus|Rep: Dbp -
Helicoverpa armigera NPV
Length = 323
Score = 95.5 bits (227), Expect = 9e-19
Identities = 68/195 (34%), Positives = 100/195 (51%), Gaps = 8/195 (4%)
Frame = +3
Query: 42 MATKRKIGDSSSD--DNQPKRERVESG-EDQQLVPY---NNNNGAAFNVKHDETGVM-CY 200
M KR I +D D + KR +++S L Y N+N+ + V++DE+ M C
Sbjct: 1 MNNKRSINCEEADNGDTESKRAKLDSSVPSTTLAVYRNENDNDDSDEIVEYDESDKMLCI 60
Query: 201 FTPSSVQLEPRELTKMLWQEQMAINVKRGNFSILNCSC-FEGRFLKNEFCRLANLNSLHE 377
F P Q E R +T W ++ N+++ N ++L C F F F L SL
Sbjct: 61 FKP---QTETRSIT---WVDKFTHNLQKKNLTVLRCHTPFNKLFESLGF--LNESISLES 112
Query: 378 WEDKLYPEPDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQ 557
W DKLYP+ + +V+ K TY IG V+G F+F D +KR KS +G+FF I
Sbjct: 113 WIDKLYPQVNDKVVIEPLKPPKLTYKIGVLVKGGMFHFYFFDMVKMKRYKSVYGEFFMIT 172
Query: 558 YGDIHKHNNIFGNIL 602
+ ++H HN IFGNI+
Sbjct: 173 WPNMHVHNKIFGNIM 187
>UniRef50_Q80LR8 Cluster: DNA binding protein; n=1; Adoxophyes
honmai NPV|Rep: DNA binding protein - Adoxophyes honmai
nucleopolyhedrovirus
Length = 322
Score = 84.2 bits (199), Expect = 2e-15
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Frame = +3
Query: 213 SVQLEPRELTKMLWQEQMAINVKRG-NFSILNC-SCFEGRFLKNEFCRLANLNSLHEWED 386
+ Q E R +T W E+M N+ +G N S++NC + F LK + + ++E+
Sbjct: 63 NTQPEDRNIT---WAEKMIYNLSKGKNSSVVNCMTSFHQNQLKMALDFVNTTYNFAQYEN 119
Query: 387 KLYPEPDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGD 566
+LYPEP I V P K T+ +G V+G F+F D +KR KS FG+F +I++ +
Sbjct: 120 ELYPEPISKITVEAPKPPKLTFNVGYHVKGGAVPFYFFDTVILKRFKSAFGEFLTIKWSN 179
Query: 567 IHKHNNIFGNILPK 608
I +H+ ++ NI+ K
Sbjct: 180 IGRHSKVYSNIMSK 193
>UniRef50_A1YJB7 Cluster: Single-stranded DNA binding protein; n=3;
Nucleopolyhedrovirus|Rep: Single-stranded DNA binding
protein - Spodoptera frugiperda nuclear polyhedrosis
virus (SfNPV)
Length = 331
Score = 82.6 bits (195), Expect = 7e-15
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Frame = +3
Query: 42 MATKRKIGDSSSDD-----NQPKRERVESGED----QQLVPYNNNNGAAF----NVKHDE 182
MA+KRKI + + Q +R+ VE GE+ QQL YN+NN A ++ DE
Sbjct: 1 MASKRKITEIKDEAVVANVKQQRRDSVEGGEEEEDNQQLDIYNHNNALANIEDNPMEDDE 60
Query: 183 TGVMCYFTPSSVQLEPRELTKMLWQEQMAINVKRGNFSILNC-SCFEGRFLKNEFCRLAN 359
+ V P M W + + N++ N ++L C + F F F
Sbjct: 61 VSHPDHDKMLCVFKVPTITRAMTWVDLLLYNLQAKNITVLRCEAAFNKLFDCLTFLEQGL 120
Query: 360 LNSLHEWEDKLYPEPDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFG 539
H D+ PE K I++L+P + Y +G V+G F+F D+ +KR NFG
Sbjct: 121 CIDTHM--DEFEPEISKEIIILKPKPPRVVYNVGKVVRGGSKPFFFFDYAKVKRCVGNFG 178
Query: 540 QFFSIQYGDIHKHNNIFGNILPK 608
+F SI + + + HN +G ++ K
Sbjct: 179 EFLSISWSNQYIHNKAYGKVIIK 201
>UniRef50_Q0N472 Cluster: DNA binding protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: DNA binding protein -
Clanis bilineata nucleopolyhedrosis virus
Length = 318
Score = 81.0 bits (191), Expect = 2e-14
Identities = 53/177 (29%), Positives = 86/177 (48%)
Frame = +3
Query: 78 DDNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPSSVQLEPRELTKMLWQ 257
+DN E+ E ED QL+PY N ++C F V ++ R++T +
Sbjct: 22 NDNDYNDEQNE--EDNQLMPYAGN----------ANNLLCVFN-EPVAIKRRKVTCV--- 65
Query: 258 EQMAINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSLHEWEDKLYPEPDKNIVVLEPAN 437
+ N+KRGN ++L+C G L N L +L EW D++ PEP IVV +P
Sbjct: 66 DIFEYNLKRGNTTLLHCDT-PGNDLVNLLASLKYKLNLDEWLDRMLPEPHAKIVVTKPVA 124
Query: 438 GKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGDIHKHNNIFGNILPK 608
+ Y +G V G F+F D ++R G+FF+ ++ + HN ++ NI+ +
Sbjct: 125 PRVVYQVGFHVHGGKVPFYFFDTVYLRRYSGKHGEFFTARWSSMATHNAVYANIIKR 181
>UniRef50_Q9YMS7 Cluster: LdOrf-47; ssDNA binding protein; n=1;
Lymantria dispar MNPV|Rep: LdOrf-47; ssDNA binding
protein - Lymantria dispar multicapsid nuclear
polyhedrosis virus (LdMNPV)
Length = 257
Score = 69.3 bits (162), Expect = 7e-11
Identities = 31/121 (25%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Frame = +3
Query: 252 WQEQMAINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSLHEWEDKLYPEPDKNI----V 419
W +++ N+KRGNF+++ C + L N ++ + ++ ++ +LYP+ + + V
Sbjct: 7 WIDELMYNLKRGNFTVVTCDS-PNKNLLNSLLKVQHKLNIGQYMQQLYPDVSEELAPKLV 65
Query: 420 VLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGDIHKHNNIFGNI 599
+ +P + Y +G V G F+F D ++R S+FG+F + ++ +++ HN+IF +
Sbjct: 66 IRKPKPPRLVYEVGMHVHGGKLPFYFVDTVVLRRCVSDFGEFMTARWTEMNAHNSIFAQM 125
Query: 600 L 602
+
Sbjct: 126 V 126
>UniRef50_Q8QL79 Cluster: DNA-binding protein DBP; n=2;
Nucleopolyhedrovirus|Rep: DNA-binding protein DBP -
Mamestra configurata NPV-A
Length = 328
Score = 61.3 bits (142), Expect = 2e-08
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 5/183 (2%)
Frame = +3
Query: 69 SSSDDNQPKRERVESGEDQQLVPYNNNNGAAFN---VKH-DETGVMCYF-TPSSVQLEPR 233
SSSDD P QQL YNN G V H D ++C F TP+ R
Sbjct: 25 SSSDDELPLT--------QQLSVYNNGAGGEDEDDEVHHPDGNKMLCIFKTPTMT----R 72
Query: 234 ELTKMLWQEQMAINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSLHEWEDKLYPEPDKN 413
++T W +++ N+K N ++ + + + +N ++N + + + P +N
Sbjct: 73 DVT---WMDKLRYNLKEKNMTVFH---YNSKLFENLGFLRESIN-IDDNISEFLPTVSQN 125
Query: 414 IVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGDIHKHNNIFG 593
IV+ P + + Y +G +G F+F D+ + A+S FG + S+ + +++ HN F
Sbjct: 126 IVITRPKSPRVVYQVGKLCKGGMIPFFFFDYVRVTAAESTFGNYLSLNWSNMYLHNEAFA 185
Query: 594 NIL 602
++
Sbjct: 186 KLI 188
>UniRef50_Q462E4 Cluster: Dna binding protien; n=2;
Nucleopolyhedrovirus|Rep: Dna binding protien -
Trichoplusia ni SNPV
Length = 333
Score = 51.2 bits (117), Expect = 2e-05
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Frame = +3
Query: 36 GSMATKRKIGDSSSDDNQPKRERVESGEDQ----QLVPYNNNNGAAFNVKHDETGVMCYF 203
GS KRK+ DS ++D ++ E E+ L + ++ A +C +
Sbjct: 8 GSSEMKRKLLDSVANDESSSKKFKEEYENVVTAGALTAVDASDDAPSGEYDVSDNTLCLW 67
Query: 204 TPSSVQLEPRELTKMLWQEQMAINVKR-GNFSILNCSCF----EGRFLKNEFCRLANLNS 368
S + T + ++Q + + ++IL CF + ++N RL + S
Sbjct: 68 KTQSSWMSDMISTIVSQRQQNSRIIDCISPYNILT-ECFGFIRDNEHIENHLHRLIKVQS 126
Query: 369 LHEWEDKLYPEPDKNIVVLEP--ANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQ 542
E K Y E + V+EP A+ + Y IG RV+G F++ D+ +KR ++ +G
Sbjct: 127 ----ESKDYLE---QLCVVEPNGASKRNVYEIGLRVKGGIKPFYYFDYAMVKRTRNQYGD 179
Query: 543 FFSIQYGDIHKHNNIFGNIL 602
+I+ + H +N I+GNI+
Sbjct: 180 SIAIRSANRHVYNEIYGNIM 199
>UniRef50_Q9IK76 Cluster: SsDNA binding protein; n=1; Spodoptera
litura NPV|Rep: SsDNA binding protein - Spodoptera
litura multicapsid nucleopolyhedrovirus (SpltMNPV)
Length = 290
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 405 DKNIVVLEPANGK-TTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGDIHKHN 581
+KN+ V+ P + TTYTIG V ++F D+ ++ KS +G F + + I HN
Sbjct: 100 EKNLGVMRPMHAMGTTYTIGKIVNNSLKKYYFFDYANVRICKSAYGHFMKVSWSKIGDHN 159
Query: 582 NIF 590
I+
Sbjct: 160 LIY 162
>UniRef50_Q91EX4 Cluster: ORF81 DBP; n=3; Granulovirus|Rep: ORF81
DBP - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 290
Score = 42.3 bits (95), Expect = 0.009
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Frame = +3
Query: 237 LTKMLWQEQMAINVKRGNFS---ILNC--SCFEGRFLK-NEFCRLANLNS--LHEWEDKL 392
L + W Q+ + + + + + NC S F L+ N++ RL +L+ +++ K
Sbjct: 25 LDALEWDLQLIVRMNKNMVTPNDVFNCITSDFARNILQWNKYYRLEDLSKHIVYDAPTKS 84
Query: 393 --YPEPDKNIVVLEPANGKTTYTIGPRVQGKP--CGFWFSDFGTIKRAKSNFGQFFSI 554
Y E I +E + KT Y IG + KP C FW D T+K K FG+F I
Sbjct: 85 FKYDESKIQIYSIEKTDKKTQYMIGLKTMSKPKLCSFW--DKATVKMCKGGFGEFHII 140
>UniRef50_Q9PYV4 Cluster: ORF89; n=1; Xestia c-nigrum
granulovirus|Rep: ORF89 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 277
Score = 35.5 bits (78), Expect = 0.99
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 444 TTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGDIHKHNNIFGNIL 602
T Y IG RV+G F+ +D +K +S G F S++ + + NI+ +I+
Sbjct: 91 TYYNIGMRVEGGLINFYIADRCQVKMCESTHGDFISLEGDNYPMYINIYQSIM 143
>UniRef50_A1FXV4 Cluster: TonB-dependent receptor precursor; n=1;
Stenotrophomonas maltophilia R551-3|Rep: TonB-dependent
receptor precursor - Stenotrophomonas maltophilia R551-3
Length = 947
Score = 34.7 bits (76), Expect = 1.7
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 447 TYTIGPRVQGKPCGFWFS-DFGTIKRAKSNFGQFFSIQYGDIHKHNNIFGNIL 602
T +G R G+ CG +S + T+K K N GQF+S D++ + +F ++L
Sbjct: 291 TTVVGQRPSGESCGSVYSAGYKTLKNGK-NSGQFYSSMTFDVNDNFQLFADVL 342
>UniRef50_P54675 Cluster: Phosphatidylinositol 3-kinase 3; n=5;
Eukaryota|Rep: Phosphatidylinositol 3-kinase 3 -
Dictyostelium discoideum (Slime mold)
Length = 1585
Score = 34.7 bits (76), Expect = 1.7
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Frame = +3
Query: 66 DSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPSSVQLEPRELTK 245
++++++N + +++L+ NNNN N K +ET +LE E K
Sbjct: 360 NNNNNNNNNNNNNNNNNNNEELINNNNNNNNDENYKIEETEESLKELLEKEKLENEEREK 419
Query: 246 MLWQEQMAINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSLHEWEDKLYPEP-DKNIVV 422
+L + N+K+ N +G F++ C +N + L E + L E + N++V
Sbjct: 420 ILKERNEIDNLKKKN------HLSKGYFMR--ACNASNDDGLEEEDIPLQDEHWETNVIV 471
Query: 423 LEP 431
L P
Sbjct: 472 LLP 474
>UniRef50_Q57Z48 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 304
Score = 34.3 bits (75), Expect = 2.3
Identities = 26/84 (30%), Positives = 37/84 (44%)
Frame = +3
Query: 12 EPQQTAHVGSMATKRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGV 191
E + H T +K GD S++N E + ED + V N NG N KH+ET
Sbjct: 160 EEESVVHGNDNVTDQKKGDDRSNENA---EAIPRNEDNKKVADNGGNGV--NDKHNETTT 214
Query: 192 MCYFTPSSVQLEPRELTKMLWQEQ 263
T + +QL R + QE+
Sbjct: 215 EGDDTRNKLQLPHRNQSLPQAQEK 238
>UniRef50_O60019 Cluster: Endo-1,3(4)-beta-glucanase; n=1;
Xanthophyllomyces dendrorhous|Rep:
Endo-1,3(4)-beta-glucanase - Phaffia rhodozyma (Yeast)
(Xanthophyllomyces dendrorhous)
Length = 424
Score = 33.9 bits (74), Expect = 3.0
Identities = 25/104 (24%), Positives = 44/104 (42%)
Frame = +3
Query: 69 SSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPSSVQLEPRELTKM 248
S + NQ +R + P+N N G + +K D +G+ YF P + P ++T+
Sbjct: 274 SYATSNQGCGQRESASHQAYGEPFNQNGGGVYAMKWDTSGISVYFFPRNA--IPADITQG 331
Query: 249 LWQEQMAINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSLHEW 380
+ + GNF +C F +F K+ + N +W
Sbjct: 332 VPLPE-TWGTPMGNFPSTSCEPF--KFFKDHH-TIINTTFCGDW 371
>UniRef50_Q11TN9 Cluster: Putative uncharacterized protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Putative
uncharacterized protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 180
Score = 33.5 bits (73), Expect = 4.0
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Frame = +3
Query: 102 RVESGEDQQLVPYNNNNGA-AFNVKHDETGVM--CYFTPSSVQL-----EPRELTKMLWQ 257
+++S D L+ ++N+ G AFN+KHD+T ++ Y+ P ++L + + ++
Sbjct: 39 KIKSAHDHDLITFSNDTGYFAFNLKHDDTILLQKDYYYPIYMRLGVHHFDSTHVIRIQLF 98
Query: 258 EQMAINVKRGNFSILNCSCFEGRFLKNEFCRLANLN-SLHEWEDKL 392
I FS N FE F +E +N +L + +D L
Sbjct: 99 PSQTIYKVPNKFSTKNLQAFEYHFTHDEIGNDSNAEITLFQTKDAL 144
>UniRef50_A2FMG1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 871
Score = 33.1 bits (72), Expect = 5.3
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 12 EPQQTAHVGSMATKRKIGDSSSDDNQP--KRERVESGEDQQLVPYNNNNGAAFNVKHDE 182
+ ++TA K DSS D+N P KR+ ++S D ++P +NN F+ DE
Sbjct: 122 DEKKTASKSGAGNKAAAFDSSDDENTPQIKRKILDSSSDDDILPAKHNN-VPFDDSSDE 179
>UniRef50_Q8TFG9 Cluster: Uncharacterized serine/threonine-rich
protein PB15E9.01c precursor; n=2; Schizosaccharomyces
pombe|Rep: Uncharacterized serine/threonine-rich protein
PB15E9.01c precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 943
Score = 32.7 bits (71), Expect = 7.0
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 436 TARLRTPSVQECRASPADFGFPTLEP*NVPKATLASFLAFNTETFTNTTIYLATF 600
T + T +++ AS G PT P N P T + T T+T T + +TF
Sbjct: 724 TTEIITSTIEPTTASGTGGGNPTAAPTNEPTVTTGTETTEGTATYTEPTTFTSTF 778
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,548,487
Number of Sequences: 1657284
Number of extensions: 14088396
Number of successful extensions: 47867
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 45166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47786
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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