Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27d14
         (299 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   1.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    20   5.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    19   8.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    19   8.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 139 ILYLKKKTTYLTEFELNLFSYRKKYICI 56
           I+Y K   T++    LN+    K ++C+
Sbjct: 240 IMYEKTNVTFVHLAVLNILRVGKNFVCL 267


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 248 FVTNLFRNTLDISDKKK 298
           ++ N+F+ TL   +KKK
Sbjct: 241 YLINVFKTTLQEREKKK 257


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 57  IHIYFFL*LNKL 92
           +H++FF   NKL
Sbjct: 118 LHVFFFTLFNKL 129


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -1

Query: 179 NPSLYYKSRGRPAYFVFKKKNN 114
           N  L   S  +P Y +   KNN
Sbjct: 6   NKLLLLDSSTQPNYLILSNKNN 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,221
Number of Sequences: 336
Number of extensions: 967
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)