Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27c12
(510 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 193 6e-50
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 187 4e-48
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 178 2e-45
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 141 2e-44
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659 54 5e-08
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 33 0.18
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427... 32 0.23
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 0.71
04_01_0576 + 7466032-7466802,7468382-7468444,7469043-7469122,746... 31 0.71
01_06_1303 - 36132588-36132710,36133879-36134103,36134318-361347... 30 0.94
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 30 1.2
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 29 2.2
08_02_0610 + 19307537-19308011,19308187-19310846 29 2.2
01_06_0134 + 26805329-26805430,26807130-26807230,26807876-268080... 29 2.2
11_06_0437 - 23533218-23536382 29 2.9
05_01_0297 - 2314687-2316021 29 2.9
03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068 29 2.9
03_05_1012 + 29670310-29670512,29670856-29671001,29671169-296712... 28 3.8
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 28 5.0
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 28 5.0
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 28 5.0
11_04_0228 + 15105752-15105921,15106774-15106919,15107369-151074... 27 6.6
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 27 6.6
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 27 6.6
02_05_0664 + 30717551-30719491 27 6.6
02_04_0656 - 24769069-24770814,24771552-24771608,24773307-247735... 27 6.6
01_05_0423 + 22032940-22033695 27 6.6
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 27 8.8
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866 27 8.8
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 27 8.8
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 27 8.8
02_01_0363 - 2612873-2613814 27 8.8
02_01_0358 - 2575858-2576796 27 8.8
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 27 8.8
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 193 bits (471), Expect = 6e-50
Identities = 85/150 (56%), Positives = 117/150 (78%), Gaps = 3/150 (2%)
Frame = +1
Query: 70 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVH 246
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK+VE+STSKTGKHGHAK H
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCH 60
Query: 247 LVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP- 423
VGIDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ ++G+ ++DL++P
Sbjct: 61 FVGIDIFNGKKLEDIVPSSHNCDVPHVDRTDYQLIDISEDGFVSLLTESGNTKDDLRLPT 120
Query: 424 DGDLGTQLRTDF-DSGKELLCTVLKSCGEE 510
D L Q++ F + GK+++ TV+ + GEE
Sbjct: 121 DDTLTNQIKNGFGEEGKDMILTVMSAMGEE 150
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 187 bits (456), Expect = 4e-48
Identities = 85/153 (55%), Positives = 116/153 (75%), Gaps = 6/153 (3%)
Frame = +1
Query: 70 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK----IVEMSTSKTGKHGH 234
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK +VE+STSKTGKHGH
Sbjct: 14 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGKHGH 73
Query: 235 AKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDL 414
AK H V IDIFNGKK EDI PS+HN DVPHV R +YQL DIS+DG+++L+ ++G+ ++DL
Sbjct: 74 AKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGFVSLLTESGNTKDDL 133
Query: 415 KIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEE 510
++P D L Q++T F GK+L+ TV+ + GEE
Sbjct: 134 RLPTDDSLLGQIKTGFGEGKDLVVTVMSAMGEE 166
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 178 bits (434), Expect = 2e-45
Identities = 86/162 (53%), Positives = 114/162 (70%), Gaps = 15/162 (9%)
Frame = +1
Query: 70 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK-------------IVEMS 207
M D E+ HFE+ D+GAS T+P Q +RKNG +++K RPCK +VE+S
Sbjct: 1323 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVS 1382
Query: 208 TSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMA 387
TSKTGKHGHAK H V IDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+
Sbjct: 1383 TSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLT 1442
Query: 388 DNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEE 510
++G ++DL++P D L TQ++ F GK+L+ TV+ + GEE
Sbjct: 1443 ESGGTKDDLRLPSDEALLTQIKDGFAEGKDLIVTVMSAMGEE 1484
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 141 bits (342), Expect(2) = 2e-44
Identities = 62/108 (57%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
Frame = +1
Query: 190 KIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 369
K+VE+STSKTGKHGHAK H V IDIF KK EDI PS+HN DVPHV R +YQL DIS+DG
Sbjct: 74 KVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDG 133
Query: 370 YLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEE 510
+++L+ +NG+ ++DL++P D +L +Q++ F GK+L+ TV+ + GEE
Sbjct: 134 FVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEE 181
Score = 55.2 bits (127), Expect(2) = 2e-44
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 70 MGDIEDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCK 192
M D E+ HFE+ D+GAS T+P Q +RKNG++++K RPCK
Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCK 42
>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
Length = 175
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +1
Query: 322 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDFDSGKELLCTVLK 495
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F GK+++ TV+
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105
Query: 496 SCG 504
+ G
Sbjct: 106 AMG 108
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 110 PGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPE 223
P PQPP PC PC K C + C PKP+
Sbjct: 81 PLPQPPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKPK 117
>03_01_0578 +
4270835-4271482,4271763-4272140,4272353-4272444,
4272637-4273240
Length = 573
Score = 32.3 bits (70), Expect = 0.23
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 83 KTHTSRPETPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPESTATLKFTWLGLI 262
K + + P TP P PP P P ++ + P K T T+ +W L
Sbjct: 277 KLYKTSPPTPTPTPPPPAMTSPPKLNLAAKPNGTSGTVTSTPTVKRRVTETV--SWDSLP 334
Query: 263 SSMVKSMKI 289
+S++KS+K+
Sbjct: 335 TSLIKSVKV 343
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 0.71
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 313 DVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 432
D P+ RE +++ ++ D Y+T D+G L ED+K+ G+
Sbjct: 38 DFPNFIREGFEVKVVTSDNYIT--RDSGLLYEDIKVGTGN 75
>04_01_0576 +
7466032-7466802,7468382-7468444,7469043-7469122,
7469505-7469622,7470035-7470067,7470400-7470474,
7470887-7471043,7471142-7471230,7472041-7472294,
7472977-7473148,7473250-7473333,7473626-7473730,
7474055-7474363,7474622-7474756,7476236-7476317,
7476423-7476502,7476622-7476783,7477071-7477138,
7478422-7478502,7478634-7478760,7478816-7478879,
7480808-7480854,7481042-7481335
Length = 1149
Score = 30.7 bits (66), Expect = 0.71
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 71 WVTSKTHTSRPETPGPQPPSPCNV 142
W+T T P+ P P PP PC+V
Sbjct: 52 WLTWPPPTPLPDAPPPPPPHPCDV 75
>01_06_1303 -
36132588-36132710,36133879-36134103,36134318-36134713,
36135352-36135547,36135591-36135740,36135818-36135924,
36135987-36136094,36136354-36136435,36136436-36136536,
36136778-36136996,36137455-36137583,36137665-36137742,
36137816-36137929,36138071-36138230,36139224-36139441
Length = 801
Score = 30.3 bits (65), Expect = 0.94
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 31 HIIPDRC*IQNTTMGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMS 207
H+ +Q ++ D E H T +ATFPM L N + +GR CK V +S
Sbjct: 423 HVADPTSLVQPRSIIDREAMHRGTSIFLPTATFPMFPERLAMNAMSLQQGRGCKSVTVS 481
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/94 (26%), Positives = 47/94 (50%)
Frame = -1
Query: 510 LLTAGFQHGAQQFLAAVEVSTQLCAEVTIRNFEVLTQVTVVSHQGQVAIIRDISQLVVFA 331
++ AG H ++ FLA ++ T + +E ++++ VL+ +T ++ V D L V
Sbjct: 1035 MVEAGTHHTSKPFLAPLKELT-IYSESSVQSMAVLSSLTSLTRLRLV----DCDNLTV-- 1087
Query: 330 LHVGYVHVVCGGTDIFILFTIEDINPNQVNFSVA 229
VG+ V+ G +++ DI+ N SVA
Sbjct: 1088 --VGFDPVMTGSLSELVIYNKPDIDDNNHRCSVA 1119
>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
Length = 664
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 421 PDGDLGTQLRTDFDSGKELLCTVLKSCGE 507
PDGDL ++R +SGKEL L G+
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 96 EVCVFDVTHCCVLNLTTVRNDM 31
+VC FD+ CC L T+ NDM
Sbjct: 835 DVCHFDLRTCCALPPATLENDM 856
>01_06_0134 +
26805329-26805430,26807130-26807230,26807876-26808032,
26808386-26808582,26809188-26809287,26809501-26809536
Length = 230
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 460 RSQYATVCRGHHPEF*GPHAGHRCQPSGSGSHHPRYQSVGSLRASRGVRPCC 305
+++YA+ HHPE H + S H R+ S G + ASR + C
Sbjct: 150 KNEYASKAEVHHPEILVDHDVYLPPSPSSHDSHERFCSGGVVLASRDGKIVC 201
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 232 HAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 369
HA LV + I N +K DI D+ H K+E Y+L + G
Sbjct: 179 HACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPYKLAIVGTGG 224
>05_01_0297 - 2314687-2316021
Length = 444
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 346 LTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCG 504
+ D + +G L + AD D+R + DGD G +LR F S +LL V S G
Sbjct: 91 VVDCTGEGVLFVEAD-ADVRLEELEEDGDGGGELRPPFPSMDQLLLDVEGSGG 142
>03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068
Length = 145
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 86 THTSRPETPGPQPPSPCNVRP-CVKTVSLC*RVVHARLLKCPHP 214
T PE P PP C + P C C ++ +LL+ HP
Sbjct: 3 TAKQAPENESPPPPPHCWIYPECTLVTRSCCLLLRLKLLRHGHP 46
>03_05_1012 +
29670310-29670512,29670856-29671001,29671169-29671245,
29671329-29671451,29671558-29671660,29672100-29672173,
29672249-29672329,29672411-29672563,29672780-29672881
Length = 353
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 336 FALHVGYVHVV-CGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLAW 184
F L GY+ + GT++F F + NP+ + ++ G C F+ LA+
Sbjct: 63 FYLETGYIGIEEKTGTELFYYFVESETNPDTDPLVLWLVGGPRCSAFSGLAY 114
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 172 LKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDI 291
LK + V+ TSK G+ GH KV V ++ KK D+
Sbjct: 679 LKNQDLLDVDSGTSKIGQSGHDKVEHVTNELSISKKAADV 718
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 103 GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 261
G SG+ + + SA+ ++ F + + K+VEM ++ K + KVH G D
Sbjct: 543 GTSGSKCS--LWLSAIVRHMFTLYDFKLAKLVEMESALEDKSKNVKVHAEGYD 593
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +1
Query: 286 DICPSTHNMD---VPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD 456
D CP T D V++ + TD +M G + GDLG+ RTD
Sbjct: 233 DQCPGTSATDSTGATCVQQAEKVSTDSDQVAKAAMMTAEGAMNFMRSTISGDLGSFPRTD 292
Query: 457 FDSGKE 474
SGKE
Sbjct: 293 AASGKE 298
>11_04_0228 +
15105752-15105921,15106774-15106919,15107369-15107448,
15107598-15107720,15107814-15107906
Length = 203
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 336 FALHVGYVHV-VCGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLA 187
F+L GYV V G +F F + NP+ + + G GC + LA
Sbjct: 52 FSLETGYVEVNESTGVQLFYYFVRSEKNPDLDPLLLWLTGGPGCSSISGLA 102
>04_04_0465 +
25427065-25427113,25428099-25428227,25428387-25428479,
25428681-25428953,25429037-25429288,25429735-25430118,
25430243-25430483,25431986-25432736
Length = 723
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 8 SVEEPVGHISFLTVVKFKTQQWVTSKTHTSRPETPGPQP-PSPCNVRPCVK 157
+V P+G S T+ + W + H+ P P P P+P RP ++
Sbjct: 14 AVYVPLGTASSTTIASYLLGLWSRAHRHSLPAPAPAPAPAPAPETHRPGIR 64
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 283 EDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLRED--LKIPDGDLGTQLRTD 456
E+I P+ + MD+ + E Y + I+++ + GD+ + L +P+ +L +
Sbjct: 571 EEIPPNANGMDIDSDREETYNVEGIAENSEDCRVRGGGDIDTECNLSLPEHELPLHQESK 630
Query: 457 FDS 465
DS
Sbjct: 631 SDS 633
>02_05_0664 + 30717551-30719491
Length = 646
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 226 HGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 327
HG+ L+ D+ G D+ HNM++ H+
Sbjct: 385 HGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHI 418
>02_04_0656 -
24769069-24770814,24771552-24771608,24773307-24773582,
24773675-24773965
Length = 789
Score = 27.5 bits (58), Expect = 6.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 409 PHAGHRCQPSGSGSHHPRYQSVG 341
PHA HR P S +P ++++G
Sbjct: 200 PHAAHRGMPIDESSENPHWRAIG 222
>01_05_0423 + 22032940-22033695
Length = 251
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 77 TSKTHTSRPETPGPQPPSPCNVRPC 151
TS T T+ P P P PP P + + C
Sbjct: 17 TSNTSTTPPPQPPPPPPPPPHPQAC 41
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 355 ISDDGYLTLMADNGDLREDLKIP 423
+ DDG + M NGD RE LK P
Sbjct: 92 VKDDGVINSMTRNGDRRELLKGP 114
>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
Length = 785
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 275 LPLKISIPTK*TLAWPCFPVLDVDISTILHGRPFSITKPFLRRA 144
L L +++PT+ + VL D+STI + P +TK F+ R+
Sbjct: 204 LQLALNVPTEESSLTFGDRVLKNDLSTIRNDSPLLLTKTFMHRS 247
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 388 QPSGSGSHHPRYQSVGSLRASRGVRPCCVWR 296
+PSG+ + P Q +L +RG R C VWR
Sbjct: 22 RPSGTANQSPNSQIGQTL--TRGPRTCAVWR 50
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 80 SKTHTSRPETPGPQPPSPCNVRP 148
S +SRP +PGP+P +P VRP
Sbjct: 308 SSAPSSRPSSPGPRPRAP--VRP 328
>02_01_0363 - 2612873-2613814
Length = 313
Score = 27.1 bits (57), Expect = 8.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 62 TQQWVTSKTHTSRPETPGPQPPSPC 136
+ +W + +P P P PPSPC
Sbjct: 96 SDKWEVGDNYLWQPLPPPPPPPSPC 120
>02_01_0358 - 2575858-2576796
Length = 312
Score = 27.1 bits (57), Expect = 8.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 62 TQQWVTSKTHTSRPETPGPQPPSPC 136
+ +W + +P P P PPSPC
Sbjct: 96 SDKWEVGDNYLWQPLPPPPPPPSPC 120
>01_06_0102 -
26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -1
Query: 354 ISQLVVFALHVGYVHVVCGGTD-IFILFTIEDINPNQ 247
IS L+ F G VH+V GG+D + IL++ + I+ ++
Sbjct: 126 ISCLMTFMSAAGEVHLVSGGSDGLLILWSADHIHDSR 162
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,853,900
Number of Sequences: 37544
Number of extensions: 376181
Number of successful extensions: 1510
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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