Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27c01
(665 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 25 0.42
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.56
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.56
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.56
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.56
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 0.56
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.56
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.56
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.74
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 3.9
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 5.2
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 9.1
DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein. 21 9.1
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 25.4 bits (53), Expect = 0.42
Identities = 7/33 (21%), Positives = 20/33 (60%)
Frame = +2
Query: 518 IEVPINFARKMIVLIKKSLIVLFQRCAYTFNSW 616
+++P + +K ++L+ + ++F C F++W
Sbjct: 46 LDIPNSVVQKHLILLMVLVNLIFNTCGEVFSAW 78
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.56
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 STRKISKPSTS-ASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSCRI 250
ST KP+TS AS+ SPA +S+ + G +++++ + + + W + +
Sbjct: 150 STSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHL 209
Query: 251 G 253
G
Sbjct: 210 G 210
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 25.0 bits (52), Expect = 0.56
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 STRKISKPSTS-ASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSCRI 250
ST KP+TS AS+ SPA +S+ + G +++++ + + + W + +
Sbjct: 150 STSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHL 209
Query: 251 G 253
G
Sbjct: 210 G 210
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.56
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 STRKISKPSTS-ASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSCRI 250
ST KP+TS AS+ SPA +S+ + G +++++ + + + W + +
Sbjct: 150 STSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHL 209
Query: 251 G 253
G
Sbjct: 210 G 210
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 25.0 bits (52), Expect = 0.56
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 STRKISKPSTS-ASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSCRI 250
ST KP+TS AS+ SPA +S+ + G +++++ + + + W + +
Sbjct: 150 STSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHL 209
Query: 251 G 253
G
Sbjct: 210 G 210
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 25.0 bits (52), Expect = 0.56
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 STRKISKPSTS-ASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSCRI 250
ST KP+TS AS+ SPA +S+ + G +++++ + + + W + +
Sbjct: 106 STSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHL 165
Query: 251 G 253
G
Sbjct: 166 G 166
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.56
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 STRKISKPSTS-ASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSCRI 250
ST KP+TS AS+ SPA +S+ + G +++++ + + + W + +
Sbjct: 150 STSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHL 209
Query: 251 G 253
G
Sbjct: 210 G 210
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.56
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 STRKISKPSTS-ASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSCRI 250
ST KP+TS AS+ SPA +S+ + G +++++ + + + W + +
Sbjct: 150 STSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHL 209
Query: 251 G 253
G
Sbjct: 210 G 210
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.74
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 STRKISKPSTSASKESCSPAK*CTSSCGSID-PGYDSSSTSAALAIRADGCHGWWRSCRI 250
ST KP+TS + ++ S TSS S + G +++++ ++ + + W + +
Sbjct: 150 STSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNPPQIYPWMKRVHL 209
Query: 251 G 253
G
Sbjct: 210 G 210
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 587 QRCAYTFNSWKVYFDYQTS 643
++ +TF SWKV + TS
Sbjct: 51 EKLHFTFKSWKVLYTSLTS 69
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 313 NQPSNSKQLLQLKPTTNTRDSRLKDH 390
N P ++ Q+ TTN+ +LK H
Sbjct: 1394 NAPPHAPQIALTSTTTNSLTFKLKPH 1419
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 243 QLRHQPWQPSARIARAAE 190
Q H+PW ++ RAA+
Sbjct: 455 QYIHEPWTAPEQVQRAAK 472
>DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein.
Length = 162
Score = 21.0 bits (42), Expect = 9.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 93 LLIFLVEA*FNQHLNRKLYFCIINTTDEIEL 1
L IFL + LN K+ +TTDE ++
Sbjct: 13 LTIFLSSMCLDPRLNSKIQVSGASTTDECQV 43
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,956
Number of Sequences: 336
Number of extensions: 2616
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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