Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27c01
         (665 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128487-1|AAM75080.1|  170|Drosophila melanogaster RE73921p pro...    79   4e-15
AE014298-2527|AAF48701.1|  170|Drosophila melanogaster CG5010-PA...    79   4e-15
BT022350-1|AAY54766.1|  176|Drosophila melanogaster IP04476p pro...    53   3e-07
BT022266-1|AAY54682.1|  176|Drosophila melanogaster IP04776p pro...    53   3e-07
AE014297-4692|AAN14264.2|  176|Drosophila melanogaster CG31007-P...    53   3e-07
BT016161-1|AAV37046.1|  114|Drosophila melanogaster AT10055p pro...    51   1e-06
AE014297-4691|AAN14263.1|  114|Drosophila melanogaster CG31008-P...    50   3e-06
AF132196-1|AAD34784.1| 1181|Drosophila melanogaster unknown prot...    31   1.4  
AE014297-3830|AAF56487.1| 1181|Drosophila melanogaster CG4719-PA...    31   1.4  
AF142061-1|AAD48407.1| 1207|Drosophila melanogaster protein kina...    30   3.3  
AE014296-1893|AAF50105.1| 1207|Drosophila melanogaster CG6297-PB...    30   3.3  
AE014296-1892|AAN11898.1| 1207|Drosophila melanogaster CG6297-PA...    30   3.3  
BT022385-1|AAY54801.1|  124|Drosophila melanogaster IP05263p pro...    29   7.5  
BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p pro...    29   7.5  
AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,...    29   7.5  

>AY128487-1|AAM75080.1|  170|Drosophila melanogaster RE73921p
           protein.
          Length = 170

 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
 Frame = +3

Query: 279 LTGMFSGGGSSEXXXXXXXXXXXXTYNQY---QGQP--AQGPCAWEIKQFLECAQQQHDL 443
           LT +FSG G  E                Y   Q QP   QG CAWE+KQF++CAQ Q DL
Sbjct: 91  LTSLFSGSGDKEAAAPAPAAAAPAPQQPYYAQQQQPNEPQGACAWELKQFIQCAQGQADL 150

Query: 444 SLCDGFNEALRQCKVNNHI 500
           +LC+GFNEALRQCK ++H+
Sbjct: 151 TLCEGFNEALRQCKQSHHL 169


>AE014298-2527|AAF48701.1|  170|Drosophila melanogaster CG5010-PA
           protein.
          Length = 170

 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
 Frame = +3

Query: 279 LTGMFSGGGSSEXXXXXXXXXXXXTYNQY---QGQP--AQGPCAWEIKQFLECAQQQHDL 443
           LT +FSG G  E                Y   Q QP   QG CAWE+KQF++CAQ Q DL
Sbjct: 91  LTSLFSGSGDKEAAAPAPAAAAPAPQQPYYAQQQQPNEPQGACAWELKQFIQCAQGQADL 150

Query: 444 SLCDGFNEALRQCKVNNHI 500
           +LC+GFNEALRQCK ++H+
Sbjct: 151 TLCEGFNEALRQCKQSHHL 169


>BT022350-1|AAY54766.1|  176|Drosophila melanogaster IP04476p
           protein.
          Length = 176

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
 Frame = +3

Query: 279 LTGMFSGGGSSEXXXXXXXXXXXXTYNQYQGQPA-----QGPCAWEIKQFLECAQ-QQHD 440
           LTGMF G G +               +  Q  P       GPCA+E++QFL+C +    D
Sbjct: 97  LTGMFQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCTEDNSSD 156

Query: 441 LSLCDGFNEALRQCK 485
           LS+C  FNEA++QC+
Sbjct: 157 LSVCKEFNEAMQQCR 171


>BT022266-1|AAY54682.1|  176|Drosophila melanogaster IP04776p
           protein.
          Length = 176

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
 Frame = +3

Query: 279 LTGMFSGGGSSEXXXXXXXXXXXXTYNQYQGQPA-----QGPCAWEIKQFLECAQ-QQHD 440
           LTGMF G G +               +  Q  P       GPCA+E++QFL+C +    D
Sbjct: 97  LTGMFQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCTEDNSSD 156

Query: 441 LSLCDGFNEALRQCK 485
           LS+C  FNEA++QC+
Sbjct: 157 LSVCKEFNEAMQQCR 171


>AE014297-4692|AAN14264.2|  176|Drosophila melanogaster CG31007-PA
           protein.
          Length = 176

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
 Frame = +3

Query: 279 LTGMFSGGGSSEXXXXXXXXXXXXTYNQYQGQPA-----QGPCAWEIKQFLECAQ-QQHD 440
           LTGMF G G +               +  Q  P       GPCA+E++QFL+C +    D
Sbjct: 97  LTGMFQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCTEDNSSD 156

Query: 441 LSLCDGFNEALRQCK 485
           LS+C  FNEA++QC+
Sbjct: 157 LSVCKEFNEAMQQCR 171


>BT016161-1|AAV37046.1|  114|Drosophila melanogaster AT10055p
           protein.
          Length = 114

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 19/34 (55%), Positives = 27/34 (79%)
 Frame = +3

Query: 381 QGPCAWEIKQFLECAQQQHDLSLCDGFNEALRQC 482
           +GPCA E+KQFL+C +   DLS+C  FN+A+R+C
Sbjct: 75  EGPCAKEMKQFLKCTEDNDDLSVCKEFNDAVRRC 108


>AE014297-4691|AAN14263.1|  114|Drosophila melanogaster CG31008-PA
           protein.
          Length = 114

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 18/34 (52%), Positives = 27/34 (79%)
 Frame = +3

Query: 381 QGPCAWEIKQFLECAQQQHDLSLCDGFNEALRQC 482
           +GPCA E+K+FL+C +   DLS+C  FN+A+R+C
Sbjct: 75  EGPCAKEMKEFLKCTEDNDDLSVCKEFNDAVRRC 108


>AF132196-1|AAD34784.1| 1181|Drosophila melanogaster unknown
           protein.
          Length = 1181

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +2

Query: 53  KC*LNHASTRKISKPSTSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALA 205
           KC L  A    +S+ + SAS +S + +     +  +  PG  SSS+SA L+
Sbjct: 785 KCLLQDAMATSLSQQALSASTQSLTSSSPAPDATAAAAPGTSSSSSSAILS 835


>AE014297-3830|AAF56487.1| 1181|Drosophila melanogaster CG4719-PA
           protein.
          Length = 1181

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +2

Query: 53  KC*LNHASTRKISKPSTSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALA 205
           KC L  A    +S+ + SAS +S + +     +  +  PG  SSS+SA L+
Sbjct: 785 KCLLQDAMATSLSQQALSASTQSLTSSSPAPDATAAAAPGTSSSSSSAILS 835


>AF142061-1|AAD48407.1| 1207|Drosophila melanogaster protein kinase
           JIL-1 protein.
          Length = 1207

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +1

Query: 310 ANQPSNSKQLLQLKPTTNTRDSRLKDHARGRSSN-SWNVLNNSTTCHSVMASMKLYVNAK 486
           AN    +++    +  TN + S+L     G  S  + N  NN+   +S+ A+   Y N+ 
Sbjct: 51  ANGNGKTRKNSNSETMTNGKKSKLNTEGSGSGSGKTLNYNNNNNNNNSISATNGQYTNSS 110

Query: 487 SITTS 501
           S TTS
Sbjct: 111 SKTTS 115


>AE014296-1893|AAF50105.1| 1207|Drosophila melanogaster CG6297-PB,
           isoform B protein.
          Length = 1207

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +1

Query: 310 ANQPSNSKQLLQLKPTTNTRDSRLKDHARGRSSN-SWNVLNNSTTCHSVMASMKLYVNAK 486
           AN    +++    +  TN + S+L     G  S  + N  NN+   +S+ A+   Y N+ 
Sbjct: 51  ANGNGKTRKNSNSETMTNGKKSKLNTEGSGSGSGKTLNYNNNNNNNNSISATNGQYTNSS 110

Query: 487 SITTS 501
           S TTS
Sbjct: 111 SKTTS 115


>AE014296-1892|AAN11898.1| 1207|Drosophila melanogaster CG6297-PA,
           isoform A protein.
          Length = 1207

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +1

Query: 310 ANQPSNSKQLLQLKPTTNTRDSRLKDHARGRSSN-SWNVLNNSTTCHSVMASMKLYVNAK 486
           AN    +++    +  TN + S+L     G  S  + N  NN+   +S+ A+   Y N+ 
Sbjct: 51  ANGNGKTRKNSNSETMTNGKKSKLNTEGSGSGSGKTLNYNNNNNNNNSISATNGQYTNSS 110

Query: 487 SITTS 501
           S TTS
Sbjct: 111 SKTTS 115


>BT022385-1|AAY54801.1|  124|Drosophila melanogaster IP05263p
           protein.
          Length = 124

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 14/50 (28%), Positives = 19/50 (38%)
 Frame = +2

Query: 95  PSTSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGWWRSC 244
           P +  + ESC  +  C   CGS   G  +  +S         C  W  SC
Sbjct: 46  PRSCCTSESCCKSGSCCGPCGSCSNGCAACLSSCCGIFPETCCGPWCESC 95


>BT003462-1|AAO39465.1| 1325|Drosophila melanogaster RH14840p
           protein.
          Length = 1325

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 65  NHASTRKISKPSTSASKESCSPAK*CTSS 151
           NH  TRK++K   S +K S S +  C SS
Sbjct: 660 NHIQTRKLAKDPDSQTKRSSSSSSECRSS 688


>AE014297-919|AAF54367.3| 1325|Drosophila melanogaster CG8874-PA,
           isoform A protein.
          Length = 1325

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 65  NHASTRKISKPSTSASKESCSPAK*CTSS 151
           NH  TRK++K   S +K S S +  C SS
Sbjct: 660 NHIQTRKLAKDPDSQTKRSSSSSSECRSS 688


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,562,147
Number of Sequences: 53049
Number of extensions: 508804
Number of successful extensions: 1647
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)