Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27b18
(624 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 346 4e-95
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 346 4e-95
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 346 4e-95
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 346 4e-95
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 346 4e-95
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 346 4e-95
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 346 4e-95
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 344 2e-94
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 337 2e-92
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 337 2e-92
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 337 2e-92
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 337 2e-92
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 337 2e-92
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 335 8e-92
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 324 2e-88
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 309 6e-84
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 306 4e-83
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 6e-25
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.4
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.3
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 4.4
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 4.4
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 7.6
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 346 bits (850), Expect = 4e-95
Identities = 155/199 (77%), Positives = 176/199 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+TGG NLGR+G I +RE
Sbjct: 181 CMVTGGANLGRIGVITNRE 199
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 346 bits (850), Expect = 4e-95
Identities = 155/199 (77%), Positives = 176/199 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+TGG NLGR+G I +RE
Sbjct: 181 CMVTGGANLGRIGVITNRE 199
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 346 bits (850), Expect = 4e-95
Identities = 155/199 (77%), Positives = 176/199 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+TGG NLGR+G I +RE
Sbjct: 181 CMVTGGANLGRIGVITNRE 199
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 346 bits (850), Expect = 4e-95
Identities = 155/199 (77%), Positives = 176/199 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+TGG NLGR+G I +RE
Sbjct: 181 CMVTGGANLGRIGVITNRE 199
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 346 bits (850), Expect = 4e-95
Identities = 155/199 (77%), Positives = 176/199 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+TGG NLGR+G I +RE
Sbjct: 181 CMVTGGANLGRIGVITNRE 199
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 346 bits (850), Expect = 4e-95
Identities = 155/199 (77%), Positives = 176/199 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+TGG NLGR+G I +RE
Sbjct: 181 CMVTGGANLGRIGVITNRE 199
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 346 bits (850), Expect = 4e-95
Identities = 155/199 (77%), Positives = 176/199 (88%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+TGG NLGR+G I +RE
Sbjct: 181 CMVTGGANLGRIGVITNRE 199
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 344 bits (845), Expect = 2e-94
Identities = 154/199 (77%), Positives = 175/199 (87%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAK
Sbjct: 61 VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNL
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+TGG NLGR+G I +RE
Sbjct: 181 CMVTGGANLGRIGVITNRE 199
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 337 bits (828), Expect = 2e-92
Identities = 149/199 (74%), Positives = 174/199 (87%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+ GG NLGRVG I +RE
Sbjct: 181 CMVIGGANLGRVGVITNRE 199
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 337 bits (828), Expect = 2e-92
Identities = 149/199 (74%), Positives = 174/199 (87%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+ GG NLGRVG I +RE
Sbjct: 181 CMVIGGANLGRVGVITNRE 199
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 337 bits (828), Expect = 2e-92
Identities = 149/199 (74%), Positives = 174/199 (87%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+ GG NLGRVG I +RE
Sbjct: 181 CMVIGGANLGRVGVITNRE 199
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 337 bits (828), Expect = 2e-92
Identities = 149/199 (74%), Positives = 174/199 (87%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+ GG NLGRVG I +RE
Sbjct: 181 CMVIGGANLGRVGVITNRE 199
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 337 bits (828), Expect = 2e-92
Identities = 149/199 (74%), Positives = 174/199 (87%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAK
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNL
Sbjct: 121 YKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNL 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+ GG NLGRVG I +RE
Sbjct: 181 CMVIGGANLGRVGVITNRE 199
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 335 bits (823), Expect = 8e-92
Identities = 148/198 (74%), Positives = 173/198 (87%)
Frame = +1
Query: 31 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 210
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 211 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 390
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKY
Sbjct: 61 KKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKY 120
Query: 391 KLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLC 570
KLCKV+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLC
Sbjct: 121 KLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLC 180
Query: 571 MITGGRNLGRVGTIVSRE 624
M+ GG NLGRVG I +RE
Sbjct: 181 MVIGGANLGRVGVITNRE 198
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 324 bits (795), Expect = 2e-88
Identities = 143/199 (71%), Positives = 169/199 (84%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 207
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 208 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 387
V KI Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAK
Sbjct: 61 VKKICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAK 120
Query: 388 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 567
YKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND++Q+D+ T KI FIKF++GN+
Sbjct: 121 YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNV 180
Query: 568 CMITGGRNLGRVGTIVSRE 624
CM+ G NLGRVG I +RE
Sbjct: 181 CMVIAGANLGRVGVITNRE 199
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 309 bits (758), Expect = 6e-84
Identities = 138/179 (77%), Positives = 158/179 (88%)
Frame = +1
Query: 88 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 267
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 268 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLV 447
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 448 THDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRE 624
THD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I +RE
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRE 179
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 306 bits (751), Expect = 4e-83
Identities = 139/181 (76%), Positives = 159/181 (87%)
Frame = +1
Query: 82 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 261
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 262 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPY 441
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 442 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 621
LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I +R
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 179
Query: 622 E 624
E
Sbjct: 180 E 180
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 6e-25
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +1
Query: 28 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 195
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 268 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 414
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 3.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 268 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 414
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 4.4
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 109 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 276
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 12 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 70
Query: 277 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 369
A +++ I + + + + D + + HRI
Sbjct: 71 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 102
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 4.4
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 109 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 276
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 757 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 815
Query: 277 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 369
A +++ I + + + + D + + HRI
Sbjct: 816 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 847
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 259 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 423
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,589,578
Number of Sequences: 237096
Number of extensions: 2191450
Number of successful extensions: 14109
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14108
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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