Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27b05
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    26   1.3  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             24   3.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   3.8  
AY341178-1|AAR13742.1|  230|Anopheles gambiae ferredoxin reducta...    23   8.8  
AY341177-1|AAR13741.1|  230|Anopheles gambiae ferredoxin reducta...    23   8.8  
AY341176-1|AAR13740.1|  230|Anopheles gambiae ferredoxin reducta...    23   8.8  
AY341175-1|AAR13739.1|  230|Anopheles gambiae ferredoxin reducta...    23   8.8  
AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    23   8.8  
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         23   8.8  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -2

Query: 638 ISQLKRRGFKHYTIVVAKRARQQLHGVRVGFGVHVNQVAAHDAYVYQILVSDTV 477
           I  LKR GF  Y I + +     L+G+   +G+H   V   D+  Y   + D +
Sbjct: 518 IGSLKRFGFHTYLIDMVQGPYPVLNGLCKLYGLHNIPVGGADSAKYVSALPDEI 571


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -1

Query: 114 RFNFLDPSLFSCKLTKLQNFSVLQNRSCSFHPLYLKK 4
           R N  D S+F  ++TK     V +   C   PL  +K
Sbjct: 172 RLNGTDGSIFPPRITKNSTLHVYEKDLCRLLPLSFEK 208


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 308 GGGRVRAPVRATGTQQDSLVRLDYHK 231
           GGGR    V ATG ++    R ++H+
Sbjct: 567 GGGRAGGGVGATGAEKQQQNRSNHHR 592


>AY341178-1|AAR13742.1|  230|Anopheles gambiae ferredoxin reductase
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 317 VYVGGGRVRAPVRATGTQQDSL 252
           VYVGG    APV +   QQ ++
Sbjct: 97  VYVGGDIANAPVHSNDGQQATI 118


>AY341177-1|AAR13741.1|  230|Anopheles gambiae ferredoxin reductase
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 317 VYVGGGRVRAPVRATGTQQDSL 252
           VYVGG    APV +   QQ ++
Sbjct: 97  VYVGGDIANAPVHSNDGQQATI 118


>AY341176-1|AAR13740.1|  230|Anopheles gambiae ferredoxin reductase
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 317 VYVGGGRVRAPVRATGTQQDSL 252
           VYVGG    APV +   QQ ++
Sbjct: 97  VYVGGDIANAPVHSNDGQQATI 118


>AY341175-1|AAR13739.1|  230|Anopheles gambiae ferredoxin reductase
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 317 VYVGGGRVRAPVRATGTQQDSL 252
           VYVGG    APV +   QQ ++
Sbjct: 97  VYVGGDIANAPVHSNDGQQATI 118


>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -2

Query: 374 CVVTIAMTSWYGNFF*KSVVYVGGGRVRAPV 282
           C+V  A+  +Y N     V  +  G  R+P+
Sbjct: 374 CLVADAIADYYTNHTFHPVAIINAGNFRSPI 404


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -2

Query: 374 CVVTIAMTSWYGNFF*KSVVYVGGGRVRAPV 282
           C+V  A+  +Y N     V  +  G  R+P+
Sbjct: 374 CLVADAIADYYTNHTFHPVAIINAGNFRSPI 404


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,637
Number of Sequences: 2352
Number of extensions: 12364
Number of successful extensions: 72
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)