Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27b02
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   3.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.8  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 472 TPVANSPLSPVRQPPKSNIKPPTRISLPTRTFS 570
           TP  NSP  P  +   +N K P    L T  ++
Sbjct: 436 TPTENSPTKPYYKLKTANNKRPPSTELGTNIYT 468


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 117 MIRTSSHVLNVQENIMTSNCASSPYSCEATSAC 19
           M++     LNVQ   +T NCA+   S      C
Sbjct: 547 MLKNRFVTLNVQLTKLTKNCATKAQSVVLGRIC 579



 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 83  WTFST*LLVLI 115
           W+FST LLV+I
Sbjct: 162 WSFSTGLLVMI 172


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 385 TVTMNRFFRENNIFDAPKTGGKGRVKSLPT 474
           TV   RF   NNI D+ +   + R +++PT
Sbjct: 185 TVLKARFEAINNIIDSIRQNSQTRNQAVPT 214


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 385 TVTMNRFFRENNIFDAPKTGGKGRVKSLPT 474
           TV   RF   NNI D+ +   + R +++PT
Sbjct: 185 TVLKARFEAINNIIDSIRQNSQTRNQAVPT 214


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 229 CPLHSPSVARKVPCDQALLRIYNFISIDKVFVY 327
           C LH   ++     +QA+L+ YNF+     + Y
Sbjct: 3   CKLHFDEMSYSQFENQAVLQSYNFLQEKTTYEY 35


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 207 DKRALYSLSPPQP*CRAQSAL*PGSP 284
           D+R+L  + PP   C   S + P  P
Sbjct: 193 DRRSLRCVVPPTEDCDVPSTIPPPPP 218


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +1

Query: 244 PSVARKVPCDQALLRIYNFISIDKVFVYKASRWLNVHSIVLI 369
           P++  K+     L  + N +     F YK  + LN H I  I
Sbjct: 108 PNLRPKLLLKHNLFLLDNIVKPIIAFYYKPIKTLNGHEIKFI 149


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 83  WTFST*LLVLI 115
           W+FST LLV+I
Sbjct: 180 WSFSTGLLVMI 190


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 396 HCNCWLALKNQH 361
           HCNC L    +H
Sbjct: 323 HCNCKLGFMGRH 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,782
Number of Sequences: 336
Number of extensions: 2876
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)