Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27b02
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   1.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   1.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.7  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   1.7  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    24   4.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   5.3  
AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding pr...    23   9.3  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 136 NHLYYPARKQACAP*HNRY*FTSWT 210
           NHLY P R++   P HN      WT
Sbjct: 554 NHLYMPNRERVLWPAHNVRDLRLWT 578


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 136 NHLYYPARKQACAP*HNRY*FTSWT 210
           NHLY P R++   P HN      WT
Sbjct: 554 NHLYMPNRERVLWPAHNVRDLRLWT 578


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 102  SHVLNVQENIMTSNCASSPYSCEAT 28
            S +  VQ+NI  S CASS   C +T
Sbjct: 3337 SGIGQVQQNIAASCCASSTIRCLST 3361


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 415 NNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQ 510
           NNI   P +       SLP P+  SP +P++Q
Sbjct: 37  NNIGVLPASKMPTSYPSLPAPIVPSPGAPIQQ 68


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
 Frame = +2

Query: 71  IIFSWTFST*LLVLIMLRCSLSITYTIQRAS-KRVRRDTIDTDLRVGQTGFI*PVPSTAL 247
           IIF W F    +  +M+ CSL +   +   S K      +   L V   GF      + L
Sbjct: 261 IIFRWVFLGQFIQCVMIWCSLVLYVAVTGLSTKAANVGVLFILLTVETYGFC--YFGSDL 318

Query: 248 VSRAKCL-VTRLSY 286
            S A C  +TR +Y
Sbjct: 319 TSEASCYSLTRAAY 332


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 560 RVGKEMRVGGLMLDFGG*RTGDSGELATGVGKDLTR 453
           R G++ R G ++ D G  R+GD G  + G G D  +
Sbjct: 273 RRGEDAR-GNIISDGGRIRSGDGGRDSRGGGVDAAK 307


>AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding
           protein AgamOBP39 protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 470 QRLSPTRRCRLFVSRQNLTSNHLRASLCLRA 562
           QR+   RR  LF + Q+ +    RA+LC+ A
Sbjct: 178 QRIPKDRRDLLFGAGQSESEFRRRANLCIDA 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,512
Number of Sequences: 2352
Number of extensions: 12215
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)