Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27b02
(570 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13858-1|AAA35914.1| 1332|Homo sapiens guanine nucleotide exchan... 33 0.94
BC117261-1|AAI17262.1| 1332|Homo sapiens son of sevenless homolo... 33 0.94
AK001429-1|BAA91686.1| 201|Homo sapiens protein ( Homo sapiens ... 33 0.94
L20686-1|AAA91852.1| 572|Homo sapiens guanine nucleotide releas... 32 1.2
AB209277-1|BAD92514.1| 1231|Homo sapiens son of sevenless homolo... 31 2.9
DQ421853-1|ABD77575.1| 500|Homo sapiens synaptojanin 1 protein. 30 5.0
AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein. 30 5.0
AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein. 30 5.0
BC048287-1|AAH48287.1| 760|Homo sapiens SEC63 homolog (S. cerev... 30 6.6
BC047221-1|AAH47221.1| 760|Homo sapiens SEC63 homolog (S. cerev... 30 6.6
AL024507-3|CAI19745.1| 760|Homo sapiens SEC63 homolog (S. cerev... 30 6.6
AJ011779-1|CAB46275.1| 760|Homo sapiens SEC63 protein protein. 30 6.6
AF100141-1|AAC83375.1| 760|Homo sapiens SEC63 protein. 30 6.6
BC009356-1|AAH09356.1| 384|Homo sapiens CDC42 effector protein ... 29 8.7
>L13858-1|AAA35914.1| 1332|Homo sapiens guanine nucleotide exchange
factor protein.
Length = 1332
Score = 32.7 bits (71), Expect = 0.94
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +1
Query: 424 FDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTF 567
FD + KG +KS P P P RQPP +KP R+ +PT F
Sbjct: 1155 FDHDASNSKGNMKSDDDP----PAIPPRQPPPPKVKP--RVPVPTGAF 1196
>BC117261-1|AAI17262.1| 1332|Homo sapiens son of sevenless homolog 2
(Drosophila) protein.
Length = 1332
Score = 32.7 bits (71), Expect = 0.94
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +1
Query: 424 FDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTF 567
FD + KG +KS P P P RQPP +KP R+ +PT F
Sbjct: 1155 FDHDASNSKGNMKSDDDP----PAIPPRQPPPPKVKP--RVPVPTGAF 1196
>AK001429-1|BAA91686.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ10567 fis, clone NT2RP2002980, weakly similar to
30S RIBOSOMAL PROTEIN S10. ).
Length = 201
Score = 32.7 bits (71), Expect = 0.94
Identities = 29/107 (27%), Positives = 49/107 (45%)
Frame = -2
Query: 554 GKEMRVGGLMLDFGG*RTGDSGELATGVGKDLTRPLPPVFGASKMLFSRKKRFIVTVG*H 375
G + GGL+L + L V KDLT+P+ + +L+ KR V V H
Sbjct: 28 GNTAKNGGLLLSTNM-KWVQFSNLHVDVPKDLTKPVATISDEPDILY---KRLSVLVKGH 83
Query: 374 SKINTILCTFSHREALYTKTLSIEIKLYMRRRAWSQGTLRATLGLWR 234
K +L ++ + L K L I IK++ R + TL ++ +++
Sbjct: 84 DK--AVLDSYEYFAVLAAKELGISIKVHEPPRKIERFTLLQSVHIYK 128
>L20686-1|AAA91852.1| 572|Homo sapiens guanine nucleotide releasing
factor protein.
Length = 572
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +1
Query: 424 FDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTF 567
FD + KG +KS P P P RQPP +KP R+ +PT F
Sbjct: 431 FDHDGSNSKGNMKSDDDP----PAIPPRQPPPPKVKP--RVPVPTGAF 472
>AB209277-1|BAD92514.1| 1231|Homo sapiens son of sevenless homolog 2
variant protein.
Length = 1231
Score = 31.1 bits (67), Expect = 2.9
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 424 FDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPT 558
FD + KG +KS P P P RQPP +KP R+ +PT
Sbjct: 1185 FDHDASNSKGNMKSDDDP----PAIPPRQPPPPKVKP--RVPVPT 1223
>DQ421853-1|ABD77575.1| 500|Homo sapiens synaptojanin 1 protein.
Length = 500
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 466 LPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
LP PL P R PP + PPTR + P R
Sbjct: 74 LPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQR 105
>AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein.
Length = 1575
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 466 LPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
LP PL P R PP + PPTR + P R
Sbjct: 1094 LPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQR 1125
>AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein.
Length = 1311
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 466 LPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
LP PL P R PP + PPTR + P R
Sbjct: 1094 LPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQR 1125
>BC048287-1|AAH48287.1| 760|Homo sapiens SEC63 homolog (S.
cerevisiae) protein.
Length = 760
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 18 RKRTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSLI 146
++R L T +TH + SLYFP ++ W+L + Q+LI
Sbjct: 623 KERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTLI 664
>BC047221-1|AAH47221.1| 760|Homo sapiens SEC63 homolog (S.
cerevisiae) protein.
Length = 760
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 18 RKRTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSLI 146
++R L T +TH + SLYFP ++ W+L + Q+LI
Sbjct: 623 KERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTLI 664
>AL024507-3|CAI19745.1| 760|Homo sapiens SEC63 homolog (S.
cerevisiae protein.
Length = 760
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 18 RKRTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSLI 146
++R L T +TH + SLYFP ++ W+L + Q+LI
Sbjct: 623 KERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTLI 664
>AJ011779-1|CAB46275.1| 760|Homo sapiens SEC63 protein protein.
Length = 760
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 18 RKRTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSLI 146
++R L T +TH + SLYFP ++ W+L + Q+LI
Sbjct: 623 KERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTLI 664
>AF100141-1|AAC83375.1| 760|Homo sapiens SEC63 protein.
Length = 760
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 18 RKRTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSLI 146
++R L T +TH + SLYFP ++ W+L + Q+LI
Sbjct: 623 KERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTLI 664
>BC009356-1|AAH09356.1| 384|Homo sapiens CDC42 effector protein
(Rho GTPase binding) 1 protein.
Length = 384
Score = 29.5 bits (63), Expect = 8.7
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +1
Query: 427 DAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPT 558
+AP + P P AN P P PP + PP + PT
Sbjct: 218 EAPAAETPAPAANPPAPTAN-PTGPAANPPATTANPPAPAATPT 260
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,038,133
Number of Sequences: 237096
Number of extensions: 1747886
Number of successful extensions: 5152
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5120
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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