Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27b02
         (570 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029083-1|ABJ17016.1|  332|Drosophila melanogaster IP10839p pro...    36   0.051
AE014134-2642|AAN10915.1|  332|Drosophila melanogaster CG18518-P...    36   0.051
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    35   0.067
AF210315-1|AAF19646.1| 1133|Drosophila melanogaster bonus protein.     33   0.36 
AE014297-2826|AAF55786.2| 1133|Drosophila melanogaster CG5206-PA...    33   0.36 
AE013599-1427|AAF58547.1|  311|Drosophila melanogaster CG13169-P...    29   5.8  
BT029132-1|ABJ17065.1| 1335|Drosophila melanogaster IP16240p pro...    28   7.7  
AY071380-1|AAL49002.1|  291|Drosophila melanogaster RE41364p pro...    28   7.7  
AY061490-1|AAL29038.1|  637|Drosophila melanogaster LD45266p pro...    28   7.7  
AF132560-1|AAD27859.1|  290|Drosophila melanogaster LD08743p pro...    28   7.7  
AE014298-1125|AAF46322.1|  637|Drosophila melanogaster CG1575-PA...    28   7.7  
AE014297-3565|AAF56311.1| 1729|Drosophila melanogaster CG6631-PA...    28   7.7  
AE013599-223|AAS64780.1|  290|Drosophila melanogaster CG3265-PE,...    28   7.7  
AE013599-222|AAM70828.1|  291|Drosophila melanogaster CG3265-PD,...    28   7.7  
AE013599-221|AAM70827.1|  291|Drosophila melanogaster CG3265-PB,...    28   7.7  
AE013599-220|AAM70826.1|  291|Drosophila melanogaster CG3265-PA,...    28   7.7  
AE013599-219|AAM70825.1|  393|Drosophila melanogaster CG3265-PC,...    28   7.7  

>BT029083-1|ABJ17016.1|  332|Drosophila melanogaster IP10839p
           protein.
          Length = 332

 Score = 35.5 bits (78), Expect = 0.051
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +1

Query: 382 PTVTMNRFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISL-PT 558
           P  +   F    N+  A K+  K  +K   TP   SP+ P+  P +S +K P ++S+ PT
Sbjct: 151 PNKSPKTFSMMQNV-PAKKSPIKSLIKKPKTPAVKSPIEPIILPTESQLKSPIKLSISPT 209

Query: 559 RT 564
           ++
Sbjct: 210 KS 211


>AE014134-2642|AAN10915.1|  332|Drosophila melanogaster CG18518-PA
           protein.
          Length = 332

 Score = 35.5 bits (78), Expect = 0.051
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +1

Query: 382 PTVTMNRFFRENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISL-PT 558
           P  +   F    N+  A K+  K  +K   TP   SP+ P+  P +S +K P ++S+ PT
Sbjct: 151 PNKSPKTFSMMQNV-PAKKSPIKSLIKKPKTPAVKSPIEPIILPTESQLKSPIKLSISPT 209

Query: 559 RT 564
           ++
Sbjct: 210 KS 211


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 35.1 bits (77), Expect = 0.067
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +1

Query: 433   PKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISL 552
             P+  G   + S PTPVA +P SP+  P +   KP TR S+
Sbjct: 19131 PQQPGVLNIPSYPTPVAPTPQSPIYIPSQEQPKPTTRPSV 19170


>AF210315-1|AAF19646.1| 1133|Drosophila melanogaster bonus protein.
          Length = 1133

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +1

Query: 469 PTPVANS---PLSPVRQPPKSNIKPPTRISLP 555
           PTP  N    P  P RQPP  N+ PP R  LP
Sbjct: 451 PTPSPNGTPQPQHPPRQPPSPNMAPPLRPGLP 482


>AE014297-2826|AAF55786.2| 1133|Drosophila melanogaster CG5206-PA
           protein.
          Length = 1133

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +1

Query: 469 PTPVANS---PLSPVRQPPKSNIKPPTRISLP 555
           PTP  N    P  P RQPP  N+ PP R  LP
Sbjct: 451 PTPSPNGTPQPQHPPRQPPSPNMAPPLRPGLP 482


>AE013599-1427|AAF58547.1|  311|Drosophila melanogaster CG13169-PA
           protein.
          Length = 311

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 452 AVSNLCQRLSPTRRCRLFVSR 514
           A SN+C R S TRRCR F +R
Sbjct: 213 ANSNVCGRWSSTRRCRRFRNR 233


>BT029132-1|ABJ17065.1| 1335|Drosophila melanogaster IP16240p
           protein.
          Length = 1335

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 436 KTGGKGRVKSLPTPVANSPLSPVRQPPKS 522
           + G   R ++ PTP  ++P SP + PP+S
Sbjct: 298 RAGPSQRREADPTPPVSAPPSPTKSPPRS 326


>AY071380-1|AAL49002.1|  291|Drosophila melanogaster RE41364p
           protein.
          Length = 291

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 430 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKP 534
           AP   G G VKSLP   A+   S  R+ P +  +P
Sbjct: 133 APMGFGSGAVKSLPGTAASGVSSSYRRGPSATTRP 167


>AY061490-1|AAL29038.1|  637|Drosophila melanogaster LD45266p
           protein.
          Length = 637

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -2

Query: 488 ELATGVGKDLTRPLPPVFGASKMLFSRKKRFIVTVG*HSKINTILCTFSHREALYT 321
           E AT + K +T PL  +  AS   +   +RF    G  +++  +LC    R  LYT
Sbjct: 461 ENATSLMKIVTEPLTSLLSASIDAYV-SQRFTTREGVATRVLNLLCEIVERSDLYT 515


>AF132560-1|AAD27859.1|  290|Drosophila melanogaster LD08743p
           protein.
          Length = 290

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 430 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKP 534
           AP   G G VKSLP   A+   S  R+ P +  +P
Sbjct: 133 APMGFGSGAVKSLPGTAASGVSSSYRRGPSATTRP 167


>AE014298-1125|AAF46322.1|  637|Drosophila melanogaster CG1575-PA
           protein.
          Length = 637

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -2

Query: 488 ELATGVGKDLTRPLPPVFGASKMLFSRKKRFIVTVG*HSKINTILCTFSHREALYT 321
           E AT + K +T PL  +  AS   +   +RF    G  +++  +LC    R  LYT
Sbjct: 461 ENATSLMKIVTEPLTSLLSASIDAYV-SQRFTTREGVATRVLNLLCEIVERSDLYT 515


>AE014297-3565|AAF56311.1| 1729|Drosophila melanogaster CG6631-PA,
           isoform A protein.
          Length = 1729

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 436 KTGGKGRVKSLPTPVANSPLSPVRQPPKS 522
           + G   R ++ PTP  ++P SP + PP+S
Sbjct: 298 RAGPSQRREADPTPPVSAPPSPTKSPPRS 326


>AE013599-223|AAS64780.1|  290|Drosophila melanogaster CG3265-PE,
           isoform E protein.
          Length = 290

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 430 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKP 534
           AP   G G VKSLP   A+   S  R+ P +  +P
Sbjct: 133 APMGFGSGAVKSLPGTAASGVSSSYRRGPSATTRP 167


>AE013599-222|AAM70828.1|  291|Drosophila melanogaster CG3265-PD,
           isoform D protein.
          Length = 291

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 430 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKP 534
           AP   G G VKSLP   A+   S  R+ P +  +P
Sbjct: 133 APMGFGSGAVKSLPGTAASGVSSSYRRGPSATTRP 167


>AE013599-221|AAM70827.1|  291|Drosophila melanogaster CG3265-PB,
           isoform B protein.
          Length = 291

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 430 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKP 534
           AP   G G VKSLP   A+   S  R+ P +  +P
Sbjct: 133 APMGFGSGAVKSLPGTAASGVSSSYRRGPSATTRP 167


>AE013599-220|AAM70826.1|  291|Drosophila melanogaster CG3265-PA,
           isoform A protein.
          Length = 291

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 430 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKP 534
           AP   G G VKSLP   A+   S  R+ P +  +P
Sbjct: 133 APMGFGSGAVKSLPGTAASGVSSSYRRGPSATTRP 167


>AE013599-219|AAM70825.1|  393|Drosophila melanogaster CG3265-PC,
           isoform C protein.
          Length = 393

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 430 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKP 534
           AP   G G VKSLP   A+   S  R+ P +  +P
Sbjct: 235 APMGFGSGAVKSLPGTAASGVSSSYRRGPSATTRP 269


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,633,686
Number of Sequences: 53049
Number of extensions: 541956
Number of successful extensions: 2307
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2305
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)