Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27b02
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 29 2.4
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 2.4
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 2.4
Z48638-8|CAA88568.1| 237|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 28 4.1
U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine rec... 28 4.1
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 28 4.1
Z50070-4|CAA90394.2| 172|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 27 7.2
U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical pr... 27 9.5
U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 27 9.5
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +1
Query: 409 RENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSN---IKPPTRISLPTRTFS 570
+E + PK + S+P P SP P+ PP ++ + PP LPTR S
Sbjct: 518 KEETEEEQPKEENNSTLPSIPIPSIFSPYEPIVPPPATSPDPMNPPIASLLPTRILS 574
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 448 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 448 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 448 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 448 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 448 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 448 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 448 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 448 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 448 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 409 RENNIFDAPKTGGKGRVKSLPTPVANSPLSP--VRQPPKSNIKPPT 540
+E + + PK K V ++ + +P S V PP+ NI PPT
Sbjct: 170 KEEKVKEDPKKDDKSGVDTIKKEGSTAPASTALVPPPPRQNIPPPT 215
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 448 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 561
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 448 KGRVKSLPTPVANSPL-SPVR--QPPKSNIKPPT 540
+ R K P V +PL +P+R QPP NIKP T
Sbjct: 384 RNRKKEKPKVVRKAPLRAPIRPRQPPNQNIKPIT 417
>Z48638-8|CAA88568.1| 237|Caenorhabditis elegans Hypothetical
protein ZK892.6 protein.
Length = 237
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 15 LRKRTLPRTNMAMTHSLTSLYFPGRSARDCWFL 113
L+K P+TN M H L + G+S++ C F+
Sbjct: 21 LKKGNFPKTNDGMQHDLVNDVLGGKSSKYCPFI 53
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 430 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRIS 549
+PK GR +S PTP NS +PV K+ IK +S
Sbjct: 1498 SPKKRVSGR-RSAPTPTKNSKKAPVSPKKKTLIKETNGVS 1536
>U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 40 protein.
Length = 363
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 268 CDQALLRIYNFISIDKVFVYKASRWLNVHSIVLI 369
C +L+ YNF ++F+Y A W+N + V I
Sbjct: 272 CTIFVLQYYNFFQEYEIFLYYAIDWVNAGNTVAI 305
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 430 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRIS 549
+PK GR +S PTP NS +PV K+ IK +S
Sbjct: 1498 SPKKRVSGR-RSAPTPTKNSKKAPVSPKKKTLIKETNGVS 1536
>Z50070-4|CAA90394.2| 172|Caenorhabditis elegans Hypothetical
protein F43G6.3 protein.
Length = 172
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 26 DVASHEYGDDAQFDVIIFS 82
D++ +E GDDA FDV+I S
Sbjct: 11 DLSDNELGDDASFDVLISS 29
>Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical
protein R04D3.6 protein.
Length = 322
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 404 FFERITFLTRQRPVARAVSNLCQRLSPTRRCRLFVSRQNLTS 529
FF +I F+T ++P+ LC+ P C F + LT+
Sbjct: 62 FFTQIRFITTKKPIEMWSYGLCKHFEPW-ICYCFYQAEQLTA 102
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 410 ERITFLTRQRPVARAVSNLCQRLSPTRRCRLFVSRQNLTSNHLRASLCLRALF 568
E I +T RP +AVS + RR V +NH+R S+ +R F
Sbjct: 307 ESIAIVTVHRPYRKAVSQMATEFKRRRRA---VQVLPFLANHMRHSVTMRQSF 356
>U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical
protein T19H12.2 protein.
Length = 225
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 26 DVASHEYGDDAQFDVII 76
D++ +E GDDA FDV+I
Sbjct: 66 DLSDNELGDDASFDVLI 82
>U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical
protein F28B4.2 protein.
Length = 860
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/88 (19%), Positives = 41/88 (46%)
Frame = +1
Query: 250 VARKVPCDQALLRIYNFISIDKVFVYKASRWLNVHSIVLIFEC*PTVTMNRFFRENNIFD 429
+++ + + L + NF S+ V S VH + + P ++++F ++I++
Sbjct: 308 ISKWIDIARELRALKNFSSLKAVLSSLQSE--PVHRLKSAWNSVPNRSISQFRELSSIYE 365
Query: 430 APKTGGKGRVKSLPTPVANSPLSPVRQP 513
+ G +G + + + SP+R+P
Sbjct: 366 TDEDGDQGNARKILEQEGTAKSSPLRRP 393
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 101 LLVLIMLRCSLSITYTIQRASKRVRRDTIDTDLR 202
LLV + ++C + T+T + + +R DT+ T +R
Sbjct: 911 LLVTLYIKCIIYYTFTSTKFRQWLRDDTVQTAIR 944
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,001,831
Number of Sequences: 27780
Number of extensions: 275942
Number of successful extensions: 864
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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