Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27a23
         (437 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   2.1  
AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    23   3.6  
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    22   8.3  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 265 LLDLPSATICLMVVLETLEINESLVYI 185
           L  L +AT+ L++VL T   NE+  Y+
Sbjct: 9   LAALTAATVLLLLVLTTTSANENTHYL 35


>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 150 LVTFVYCILVCIMYT 194
           LVTFV+ +LVC   T
Sbjct: 3   LVTFVFAVLVCCSMT 17


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 9/36 (25%), Positives = 15/36 (41%)
 Frame = -3

Query: 135 WLNIDDCVGSAPCSTSILC*TLKTIFLACDRKGFFD 28
           W   +DC     C+T I+   ++     C+  G  D
Sbjct: 77  WGAFEDCANDYDCATGIVTQYMEKYGTDCNGDGLVD 112


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,471
Number of Sequences: 2352
Number of extensions: 5598
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)