Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27a23
         (437 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058615-1|AAL13844.1|  613|Drosophila melanogaster LD30894p pro...    28   6.4  
AE013599-1003|AAM71054.1|  613|Drosophila melanogaster CG2264-PE...    28   6.4  
AE013599-1002|AAM71053.1|  613|Drosophila melanogaster CG2264-PD...    28   6.4  
AE013599-1001|AAM71052.1|  613|Drosophila melanogaster CG2264-PC...    28   6.4  
AE013599-1000|AAF58854.1|  613|Drosophila melanogaster CG2264-PB...    28   6.4  
AE013599-999|AAG22291.1|  613|Drosophila melanogaster CG2264-PA,...    28   6.4  
AE014134-354|AAF51293.2|  542|Drosophila melanogaster CG33124-PA...    27   8.4  

>AY058615-1|AAL13844.1|  613|Drosophila melanogaster LD30894p
           protein.
          Length = 613

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 278 TKYASVRSAFSNNLSNGSIRNT*NKRKFSIHNTHENAINKSNQSTLAHG 132
           TK    RSA  N L++ +     +   +SIHNT+ N  ++ + +T+  G
Sbjct: 279 TKEFHNRSAVVNLLASSAATAPPHSTHYSIHNTNVNGHHRGHTNTIGTG 327


>AE013599-1003|AAM71054.1|  613|Drosophila melanogaster CG2264-PE,
           isoform E protein.
          Length = 613

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 278 TKYASVRSAFSNNLSNGSIRNT*NKRKFSIHNTHENAINKSNQSTLAHG 132
           TK    RSA  N L++ +     +   +SIHNT+ N  ++ + +T+  G
Sbjct: 279 TKEFHNRSAVVNLLASSAATAPPHSTHYSIHNTNVNGHHRGHTNTIGTG 327


>AE013599-1002|AAM71053.1|  613|Drosophila melanogaster CG2264-PD,
           isoform D protein.
          Length = 613

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 278 TKYASVRSAFSNNLSNGSIRNT*NKRKFSIHNTHENAINKSNQSTLAHG 132
           TK    RSA  N L++ +     +   +SIHNT+ N  ++ + +T+  G
Sbjct: 279 TKEFHNRSAVVNLLASSAATAPPHSTHYSIHNTNVNGHHRGHTNTIGTG 327


>AE013599-1001|AAM71052.1|  613|Drosophila melanogaster CG2264-PC,
           isoform C protein.
          Length = 613

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 278 TKYASVRSAFSNNLSNGSIRNT*NKRKFSIHNTHENAINKSNQSTLAHG 132
           TK    RSA  N L++ +     +   +SIHNT+ N  ++ + +T+  G
Sbjct: 279 TKEFHNRSAVVNLLASSAATAPPHSTHYSIHNTNVNGHHRGHTNTIGTG 327


>AE013599-1000|AAF58854.1|  613|Drosophila melanogaster CG2264-PB,
           isoform B protein.
          Length = 613

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 278 TKYASVRSAFSNNLSNGSIRNT*NKRKFSIHNTHENAINKSNQSTLAHG 132
           TK    RSA  N L++ +     +   +SIHNT+ N  ++ + +T+  G
Sbjct: 279 TKEFHNRSAVVNLLASSAATAPPHSTHYSIHNTNVNGHHRGHTNTIGTG 327


>AE013599-999|AAG22291.1|  613|Drosophila melanogaster CG2264-PA,
           isoform A protein.
          Length = 613

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 278 TKYASVRSAFSNNLSNGSIRNT*NKRKFSIHNTHENAINKSNQSTLAHG 132
           TK    RSA  N L++ +     +   +SIHNT+ N  ++ + +T+  G
Sbjct: 279 TKEFHNRSAVVNLLASSAATAPPHSTHYSIHNTNVNGHHRGHTNTIGTG 327


>AE014134-354|AAF51293.2|  542|Drosophila melanogaster CG33124-PA
           protein.
          Length = 542

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 162 VYCILVCIMYTKLSFISSVSNTTIRQIV 245
           V  I+VC++YT L  + +V +T I Q+V
Sbjct: 161 VLIIVVCVIYTLLGGLKAVVHTDIWQVV 188


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,686,546
Number of Sequences: 53049
Number of extensions: 250771
Number of successful extensions: 1039
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)