Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27a21
         (574 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015262-1|AAT94491.1| 1280|Drosophila melanogaster LD40317p pro...    33   0.27 
AE014297-467|AAF54121.2| 1280|Drosophila melanogaster CG9727-PA ...    33   0.27 
AE013599-1731|AAF58365.1|  950|Drosophila melanogaster CG6061-PA...    30   2.6  

>BT015262-1|AAT94491.1| 1280|Drosophila melanogaster LD40317p protein.
          Length = 1280

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
 Frame = -1

Query: 508  PTGTLQSSYMLSCVTSPGRKQLHKR----AKPASVSANNHTPVLGLHDRARSRSKAKQ*A 341
            PT T  S+   +C  SPG  ++ +R    +K  S+  +N  P++G H + R    +    
Sbjct: 901  PTATGSSNPSQNCFASPGLTRMKQRPNLLSKQQSLDCDNRDPMIGAHRKGRGYVYSYP-- 958

Query: 340  SPARISFSCSWPSSPRILTIVSSSNNWQL 254
                 S S S P SP IL       NW L
Sbjct: 959  ----TSTSASAPPSPSILP-QWMCRNWSL 982


>AE014297-467|AAF54121.2| 1280|Drosophila melanogaster CG9727-PA
            protein.
          Length = 1280

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
 Frame = -1

Query: 508  PTGTLQSSYMLSCVTSPGRKQLHKR----AKPASVSANNHTPVLGLHDRARSRSKAKQ*A 341
            PT T  S+   +C  SPG  ++ +R    +K  S+  +N  P++G H + R    +    
Sbjct: 901  PTATGSSNPSQNCFASPGLTRMKQRPNLLSKQQSLDCDNRDPMIGAHRKGRGYVYSYP-- 958

Query: 340  SPARISFSCSWPSSPRILTIVSSSNNWQL 254
                 S S S P SP IL       NW L
Sbjct: 959  ----TSTSASAPPSPSILP-QWMCRNWSL 982


>AE013599-1731|AAF58365.1|  950|Drosophila melanogaster CG6061-PA
           protein.
          Length = 950

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +3

Query: 177 NTHECHGALTPCSTRSDCNLCREGLANCQLFDEDTIVKMRGDDGQEQEK 323
           N  EC+ A  PCS+   C  CR  + +    D D++  + G +GQ+++K
Sbjct: 824 NYCECYEAKIPCSSICKCVGCR-NMEDRPDVDMDSLDGLMGVEGQKKDK 871


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,486,730
Number of Sequences: 53049
Number of extensions: 576619
Number of successful extensions: 1817
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)