Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27a16
         (678 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0265 - 15012662-15013918                                         28   6.0  
03_05_0514 - 25082662-25082669,25082978-25083043,25083903-250840...    28   7.9  

>08_02_0265 - 15012662-15013918
          Length = 418

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 529 QLHSTHSHHIIRKIPLELDTSLTANDAHRLDASEGYHE 416
           ++  T +   + ++ LE D  L   D HR     GYHE
Sbjct: 232 EMDLTRTSRFVARVLLECDGRLLMADRHRHGGDAGYHE 269


>03_05_0514 -
           25082662-25082669,25082978-25083043,25083903-25084017,
           25084769-25084843,25085285-25085338,25085420-25085471,
           25087308-25087447,25087993-25088077,25088358-25088431,
           25088533-25088616,25088617-25088653,25089569-25089872,
           25090371-25090536,25091053-25091076
          Length = 427

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 348 HFLVKTRDCDKVQIINSTFIR-VFSW*PS 431
           HF++  R C    +IN+ F+R + SW PS
Sbjct: 219 HFILLLRACQCYALINANFLRNISSWIPS 247


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,116,888
Number of Sequences: 37544
Number of extensions: 298432
Number of successful extensions: 761
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)