Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27a16
(678 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 25 0.50
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 25 0.50
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 25 0.50
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 25 0.50
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 25 0.50
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 25 0.50
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 25 0.50
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 25 0.50
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 25 0.50
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 25 0.50
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 25 0.50
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 2.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 3.5
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 4.7
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 4.7
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 675 FNKYNNHDYSKIY 637
+N YN H+Y+K+Y
Sbjct: 98 YNNYNKHNYNKLY 110
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 675 FNKYNNHDYSKIY 637
+N YN H+Y+K+Y
Sbjct: 98 YNNYNKHNYNKLY 110
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 675 FNKYNNHDYSKIY 637
+N YN H+Y+K+Y
Sbjct: 98 YNNYNKHNYNKLY 110
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 675 FNKYNNHDYSKIY 637
+N YN H+Y+K+Y
Sbjct: 98 YNNYNKHNYNKLY 110
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 675 FNKYNNHDYSKIY 637
+N YN H+Y+K+Y
Sbjct: 98 YNNYNKHNYNKLY 110
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 675 FNKYNNHDYSKIY 637
+N YN H+Y+K+Y
Sbjct: 98 YNNYNKHNYNKLY 110
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 675 FNKYNNHDYSKIY 637
+N YN H+Y+K+Y
Sbjct: 98 YNNYNKHNYNKLY 110
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 675 FNKYNNHDYSKIY 637
+N YN H+Y+K+Y
Sbjct: 98 YNNYNKHNYNKLY 110
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 675 FNKYNNHDYSKIY 637
+N YN H+Y+K+Y
Sbjct: 98 YNNYNKHNYNKLY 110
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 675 FNKYNNHDYSKIY 637
+N YN H+Y+K+Y
Sbjct: 331 YNNYNKHNYNKLY 343
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.4 bits (53), Expect = 0.50
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 675 FNKYNNHDYSKIY 637
+N YN H+Y+K+Y
Sbjct: 331 YNNYNKHNYNKLY 343
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 137 RVAAPTQALSSTAPGGQ 187
RV APT SS +PG Q
Sbjct: 1275 RVIAPTTITSSQSPGNQ 1291
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 672 NKYNNHDYSKIY 637
N YNN++Y K+Y
Sbjct: 316 NYYNNNNYKKLY 327
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -2
Query: 413 NPNEGTINYLH 381
NPNE +++YLH
Sbjct: 516 NPNEKSLHYLH 526
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -2
Query: 413 NPNEGTINYLH 381
NPNE +++YLH
Sbjct: 516 NPNEKSLHYLH 526
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,456
Number of Sequences: 438
Number of extensions: 3671
Number of successful extensions: 27
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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