Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27a12
(613 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 81 1e-16
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 34 0.014
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 33 0.025
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 32 0.075
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 31 0.099
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 30 0.23
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 30 0.23
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.23
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.30
SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces pombe... 29 0.40
SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.53
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 29 0.70
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 0.93
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 28 1.2
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 27 1.6
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 27 2.1
SPAC9G1.04 |oxa101|oxa1, oxa1-1, oxa1sp1|mitochondrial inner mem... 27 2.1
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 3.7
SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8 |Schizos... 26 3.7
SPAC12B10.07 |acp1||F-actin capping protein alpha subunit|Schizo... 26 4.9
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 26 4.9
SPAC328.08c |||tubulin specific chaperone cofactor C |Schizosacc... 26 4.9
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 4.9
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 25 6.5
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 6.5
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 6.5
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 25 6.5
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 25 8.6
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 25 8.6
SPBC30B4.08 |eri1||double-strand siRNA ribonuclease|Schizosaccha... 25 8.6
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 25 8.6
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 8.6
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 81.0 bits (191), Expect = 1e-16
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Frame = +2
Query: 152 SVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGEN 331
S A EKPAE + + ++E ++ L ++ + ++ ++ +++LAD N
Sbjct: 31 STEAAKEEKPAEEKVAETENVDVKELQSKLSELKSKYEAKDKEVAELKGSIRQSLADYRN 90
Query: 332 VRKRMLKQVEDAKSFAIQSFCKDLLEVADTL-TXXXXXXXXXXXXXXXXXXLRALHDGVR 508
+ RM + +E ++FA+Q KDLL+ D L L L++G+
Sbjct: 91 LENRMKRDMEQTRAFAVQKLTKDLLDSVDNLERALSIVPEEKRNNRESNKDLVDLYEGLA 150
Query: 509 LTRAQLGQVFARHGLVPVSPLREKFDPNLHEALFQ 613
+T + L + ++GLV + E FDPN+HEA+FQ
Sbjct: 151 MTESNLMKTLGKYGLVRYDGIGEDFDPNIHEAVFQ 185
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 34.3 bits (75), Expect = 0.014
Identities = 15/64 (23%), Positives = 39/64 (60%)
Frame = +2
Query: 185 ESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVED 364
++ N +L A ++EC I+SLT E+ + +E+ +++D + + + + + + +L +V D
Sbjct: 1108 QATKNKELEAKVKECLNNIKSLTKELENKEEKCQNLSDASLKYI-ELQEIHENLLLKVSD 1166
Query: 365 AKSF 376
+++
Sbjct: 1167 LENY 1170
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 33.5 bits (73), Expect = 0.025
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 173 EKPAESESNDKLPA-TIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRML 349
E+PA++E+++K+P+ IE Q+ +E ++ N I +K +R +D +R+
Sbjct: 103 ERPAKAENDEKVPSDAIEALETQLTQQKSEKHN-SSVINFIYEKNERLWSDPFVSSQRLR 161
Query: 350 KQVEDAKSFAIQSFCKDL 403
KQ + K + KDL
Sbjct: 162 KQFRERKKIEKKQEAKDL 179
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 31.9 bits (69), Expect = 0.075
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +2
Query: 194 SNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKR 310
SN KL ++E +++E+ T E+N IK + + +D++KR
Sbjct: 162 SNTKLKDSMETMKRRMETETKEMNKIKPKNDSESDRFKR 200
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 31.5 bits (68), Expect = 0.099
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 176 KPAESESNDKLPAT-IEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLK 352
K ES +D + A+ + ++ E L+ + S++EQ+ I YK L D E+ R+
Sbjct: 349 KLGESNVDDGMAASRYDTVKREKERLSEHLKSLQEQYEHIQSVYKNVLLDRESYIMRLGN 408
Query: 353 QVED 364
++ +
Sbjct: 409 KISE 412
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 239 IESLTNEVNSIKEQFNDINDKYKRALADGENVRKR 343
+ LTNE+ +K+++ ++D+Y +L G + KR
Sbjct: 716 VNQLTNELMELKKRYEKLSDRY-NSLTPGYHKHKR 749
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 30.3 bits (65), Expect = 0.23
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +2
Query: 119 RPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNS-----IKEQF 283
+ N+ I + LS + ES D L + +QIES NEVNS ++F
Sbjct: 496 KANIVIDELNSAKLKLSKQVEEESSMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEF 555
Query: 284 NDINDKYKRALAD 322
+ +Y++ L +
Sbjct: 556 ETLKTQYEKNLCN 568
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 30.3 bits (65), Expect = 0.23
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +2
Query: 125 NLTIKTFRPSVRALSAEKPAESESNDKLPAT-----IEECHKQIESLTNEVNSIKEQFND 289
N +K+ + A + E+ + S D LP T +E H + + +E+N +K Q N+
Sbjct: 174 NSDLKSIKQDSSAAAIEELVQQISPD-LPRTELLKILEAKHPEFQLFLDELNQLKPQLNE 232
Query: 290 INDKYK 307
I +K K
Sbjct: 233 IKEKLK 238
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.23
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +2
Query: 164 LSAEKPAE--SESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVR 337
L++EK E +E++++ +E +I + ++ S++ + D+N + + + E+
Sbjct: 974 LASEKTLEMMNETHEQFKHLVES---EISTREEKITSLRSELLDLNKRVEVLKEEKESSS 1030
Query: 338 KRMLKQVEDA--KSFAIQSFCKD 400
K + KQ+EDA + + SF KD
Sbjct: 1031 KELAKQLEDAVREKDSALSFKKD 1053
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 29.9 bits (64), Expect = 0.30
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 107 DTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFN 286
D +P+ IK +V + S+ D+L ++ H E ++ +KE+ N
Sbjct: 119 DKAAKPDGEIKK---NVETEVTSRSTSSQEKDELEKQVKTLHDLNEQKDKKIKELKERIN 175
Query: 287 DINDKYK--RALADGENVRKRMLKQVEDA 367
D+ Y+ +A AD ++ ++ + E A
Sbjct: 176 DLTYDYETLKANADDSEGKQTLVSKREAA 204
Score = 27.1 bits (57), Expect = 2.1
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 203 KLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKS 373
K A +EE ++ NE+N + + N D K+ D EN R+LK E KS
Sbjct: 200 KREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLEN---RLLKVEEHEKS 253
>SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 104
Score = 29.5 bits (63), Expect = 0.40
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 218 IEECHKQIESLTNEVNSIKEQFND--INDKYKRALADGENVRKRMLKQVEDAKSFAIQ 385
+EECHK E N+IK + D+ +A + EN R R E+ K I+
Sbjct: 20 LEECHKSFGKFFGECNTIKYELKACLTKDRNDKARLNRENARMRKKVIEENRKKEEIE 77
>SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 377
Score = 29.1 bits (62), Expect = 0.53
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 166 ERTNGWSESFDR*IWSQRGIRQVFCYSPKC-ISF*SHYSLYFIHQI 32
E +GW E DR I+ + I P C +SF +SLY HQ+
Sbjct: 250 EHKSGWKEDGDRIIF-EIPISTSLLSKPICDVSFDGQFSLYIAHQL 294
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 28.7 bits (61), Expect = 0.70
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 164 LSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKR 310
++AE+ + +KL A EE +++ S V +KE+ ND+ K R
Sbjct: 235 INAEQRLQISELEKLKAAQEERIEKLSSNNRNVEILKEEKNDLESKLYR 283
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/67 (23%), Positives = 36/67 (53%)
Frame = +2
Query: 152 SVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGEN 331
SV+ + +KP+ + +N+ + Q+E+L N++ + +F + +R LA+ E+
Sbjct: 35 SVKKPNLKKPSVNSANETKNPKLASLEFQLENLKNDLKRKELEFEREQIELQRKLAE-EH 93
Query: 332 VRKRMLK 352
+K L+
Sbjct: 94 EQKNSLQ 100
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 28.3 bits (60), Expect = 0.93
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 233 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 388
K+ + N IKE I DK+K AL+D +NV K D IQ+
Sbjct: 3110 KEKSRIENGFKKIKETSQGI-DKFKEALSDQQNVLFSKTKTANDRLQCIIQT 3160
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 152 SVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGEN 331
+V + S PA +++ ++ P T+E + + LTN++ K+ +I D Y L D
Sbjct: 55 NVDSSSVAYPAWNQAGEEAPVTMEGVQEILLDLTNKLGFQKDNMRNIFD-YVMVLLDSRA 113
Query: 332 VR 337
R
Sbjct: 114 SR 115
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Frame = +2
Query: 239 IESLTNEVNSIKEQFND-----INDKYKRALADGENVRKR 343
I+++ NE+N +++Q ND ++DK+ ++ + VRK+
Sbjct: 157 IDTIRNELNELRDQLNDSESKKLSDKFVEIRSELDEVRKQ 196
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 185 ESESNDKLPATIEECHKQIESLTNEVNSIKEQFN-DINDKYKRALADGENVRKRMLKQVE 361
++ S++ +P H Q +EV+S++ QFN D + EN+ + Q
Sbjct: 301 DANSSNSVPVEFNSLHSQNVDYRDEVDSLRPQFNVDEQSSISHSSNASENIVDGAVTQAN 360
Query: 362 DAKS 373
+S
Sbjct: 361 GIES 364
>SPAC9G1.04 |oxa101|oxa1, oxa1-1, oxa1sp1|mitochondrial inner
membrane translocase Oxa101|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 374
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +2
Query: 206 LPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQ 385
LP+ IE+ +TN + S+KE + + D +K + R A +
Sbjct: 294 LPSIIEKQPSGFTLITNPIKSLKEFYKGVRDGFKTQYEQLQKDVSRRAVATTSASTIRPN 353
Query: 386 SFCKDLLEV 412
S K L E+
Sbjct: 354 SHYKKLKEL 362
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 155 VRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKE 277
++ L E ++E+ +L IEE H+++ SL E SIKE
Sbjct: 500 MKKLQDENSEKTETIAQLEQIIEELHEELRSLEEE--SIKE 538
>SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 3.7
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +2
Query: 128 LTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIE------SLTNEVNSIKEQFND 289
LT T P +S ESE +DK ++ H E SL++ + S+ E+ +
Sbjct: 52 LTASTTLPENFVISFTNSIESEESDKSDYLLDHAHSLQELSTTHSSLSSTLTSMSEESSS 111
Query: 290 INDKYKRALADGEN 331
K+ L DG N
Sbjct: 112 TESKF-ATLNDGIN 124
>SPAC12B10.07 |acp1||F-actin capping protein alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 256
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +2
Query: 191 ESNDKLPATIEECHKQIESLTNEVNSIKEQFN----DINDK 301
+++ + AT+EE K E L N I++ FN +NDK
Sbjct: 187 DASRPISATVEETSKLYEVLAQVENGIQQSFNVELSSLNDK 227
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 369 LASSTCFNILFRTFSPSANALLYLSLMSLNCSLIELTSLVK 247
L+SS C +PS N+ Y +L +CS+++L SLV+
Sbjct: 256 LSSSLCDAQELYIMNPS-NSYTYANLRFSDCSILQLHSLVE 295
>SPAC328.08c |||tubulin specific chaperone cofactor C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 179 PAESESNDKLPATIEECHKQIESLTNEVNSIKEQ 280
P+E S + +EE K + +T E+N +++Q
Sbjct: 21 PSEQTSRSEKETWLEEKSKYLGEMTRELNEVQDQ 54
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +2
Query: 233 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKS 373
+++E LT+E+ + E++ND ++ + + + K ED+ S
Sbjct: 599 EEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNKAKEDSTS 645
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Frame = +2
Query: 194 SNDKLPATIEECHKQIE-------SLTNEVNSIKEQFNDINDKYKRA 313
++D PA++E C KQ++ +E+ S+ ++F +I+++ A
Sbjct: 803 TSDVSPASVETCDKQVQLEDTRYRQHLSELESLNQRFTEISERIPSA 849
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 25.4 bits (53), Expect = 6.5
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Frame = +2
Query: 8 SLNVEFISNLVNKI*GIMALKAYTFGRIA-KYLADTTLRPNLTIKTFRPSVRALS-AEKP 181
S +V+ S ++ ++ G+++ + GR+ + + + T P +K P V + A +
Sbjct: 868 SCDVQATSEVLGRVYGVVSKRR---GRVIDEEMKEGT--PFFIVKALIPVVESFGFAVEI 922
Query: 182 AESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVE 361
+ S P I + ++ V + +E+ D+ + LAD EN+ KR + V
Sbjct: 923 LKRTSGAAYPQLIFHGFEMLDENPFWVPTTEEELEDLGE-----LADRENIAKRYMLNVR 977
Query: 362 DAKSFAIQSFCKDLLEVADTL 424
K ++ + E TL
Sbjct: 978 KRKGLLVEQKIVEKAEKQRTL 998
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/60 (21%), Positives = 31/60 (51%)
Frame = +2
Query: 137 KTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRAL 316
++FR ++ L ++ A N + + EC + S+T + + +F D +++++R L
Sbjct: 1038 ESFRERMQILKSKYGA---LNAERAGLLGECKQLENSITKDKEELNMEFKDADERFRRQL 1094
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2
Query: 198 FDSDSAGFSALSARTDGLKVLIVRFGLSVVSAKYF 94
+DS SA SA R + L + VRF +SV+ A++F
Sbjct: 672 YDSVSASISARIKRQNSLNLKPVRFRISVL-AEFF 705
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 25.0 bits (52), Expect = 8.6
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 113 TLRPNLTIKTFRPSVRALSAEKPAESE--SNDKLPATIEECHKQIESLTNEVNSIKE 277
T+RP+L T R SVR +A +++ ++ K P + + Q E T VN + E
Sbjct: 63 TMRPSLAPNTRRSSVRVSNASFISQTPNITSIKDPRPLSDRRYQQECATQVVNYLLE 119
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +2
Query: 182 AESESNDKLPATIEECHKQIESLTNEVNSIKEQF 283
A + ++L + + + + +E L +E+NSIKE +
Sbjct: 861 ARKKEIEELESKMSDFDQSVEELQDEMNSIKEDW 894
>SPBC30B4.08 |eri1||double-strand siRNA
ribonuclease|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 191 ESNDKLPATIEECHKQIESLTNEVNSIKEQ 280
E N K P+T+EE ++ L N KE+
Sbjct: 16 EMNQKTPSTVEEIRIALQELGLSTNGNKEK 45
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 25.0 bits (52), Expect = 8.6
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 221 EECHKQIESLTNEVNSIK-EQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCK 397
EE ++ L E ++I + D+ND++ R + GEN ++ + + ++ S C
Sbjct: 505 EEEQRKFARLDIEPSTISWNRTLDVNDRFLRKITIGENPTEKGFTR-QTGFDLSVASECM 563
Query: 398 DLLEVADTL 424
+L +A L
Sbjct: 564 SVLALATDL 572
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.0 bits (52), Expect = 8.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 181 WLLCTERTNGWSESFD 134
W+LC ++ N W FD
Sbjct: 2599 WILCAQKLNQWDVLFD 2614
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,255,162
Number of Sequences: 5004
Number of extensions: 41025
Number of successful extensions: 171
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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