Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27a12
(613 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094889-1|AAM11242.1| 213|Drosophila melanogaster RE56495p pro... 141 6e-34
AE013599-1747|AAF58354.1| 213|Drosophila melanogaster CG6155-PA... 141 6e-34
U34903-1|AAA79044.1| 213|Drosophila melanogaster droe1 protein. 138 7e-33
AY060856-1|AAL28404.1| 183|Drosophila melanogaster GM03203p pro... 94 1e-19
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei... 35 0.100
X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin ... 33 0.23
L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like p... 32 0.53
AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p pro... 32 0.53
AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-P... 32 0.53
AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p pro... 31 0.93
AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC... 31 0.93
AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD... 31 0.93
AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB... 31 0.93
AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA... 31 0.93
BT023107-1|AAY55523.1| 396|Drosophila melanogaster IP10876p pro... 29 6.5
AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p pro... 29 6.5
AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA... 29 6.5
K03277-1|AAA28973.1| 284|Drosophila melanogaster protein ( D. m... 28 8.6
AE014297-2003|AAN13653.1| 284|Drosophila melanogaster CG4843-PB... 28 8.6
AE014297-2002|AAN13652.1| 284|Drosophila melanogaster CG4843-PA... 28 8.6
AE014296-2260|AAF49830.1| 236|Drosophila melanogaster CG14111-P... 28 8.6
>AY094889-1|AAM11242.1| 213|Drosophila melanogaster RE56495p
protein.
Length = 213
Score = 141 bits (342), Expect = 6e-34
Identities = 83/184 (45%), Positives = 108/184 (58%)
Frame = +2
Query: 62 ALKAYTFGRIAKYLADTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQI 241
AL FGR +L + N++ ++R S EK E + K AT E ++
Sbjct: 6 ALPLQMFGRRLVHLRSSVTSQNMS------ALRLYSTEKQPEEATEQK--AT--ESSPEV 55
Query: 242 ESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADT 421
E LT E+ + KEQ ++ DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDLLEVADT
Sbjct: 56 EKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADT 115
Query: 422 LTXXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHE 601
L L+ L++G+ +TRA L QVF RHGL P+ P+ +KFDPN HE
Sbjct: 116 L--GHATQAVPKDKLSGNADLKNLYEGLTMTRASLLQVFKRHGLKPLDPINQKFDPNQHE 173
Query: 602 ALFQ 613
ALFQ
Sbjct: 174 ALFQ 177
>AE013599-1747|AAF58354.1| 213|Drosophila melanogaster CG6155-PA
protein.
Length = 213
Score = 141 bits (342), Expect = 6e-34
Identities = 83/184 (45%), Positives = 108/184 (58%)
Frame = +2
Query: 62 ALKAYTFGRIAKYLADTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQI 241
AL FGR +L + N++ ++R S EK E + K AT E ++
Sbjct: 6 ALPLQMFGRRLVHLRSSVTSQNMS------ALRLYSTEKQPEEATEQK--AT--ESSPEV 55
Query: 242 ESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADT 421
E LT E+ + KEQ ++ DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDLLEVADT
Sbjct: 56 EKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADT 115
Query: 422 LTXXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHE 601
L L+ L++G+ +TRA L QVF RHGL P+ P+ +KFDPN HE
Sbjct: 116 L--GHATQAVPKDKLSGNADLKNLYEGLTMTRASLLQVFKRHGLEPLDPINQKFDPNQHE 173
Query: 602 ALFQ 613
ALFQ
Sbjct: 174 ALFQ 177
>U34903-1|AAA79044.1| 213|Drosophila melanogaster droe1 protein.
Length = 213
Score = 138 bits (333), Expect = 7e-33
Identities = 82/184 (44%), Positives = 107/184 (58%)
Frame = +2
Query: 62 ALKAYTFGRIAKYLADTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQI 241
AL FGR +L + N++ ++R S EK E + K AT E ++
Sbjct: 6 ALPLQMFGRRLVHLRSSVTSQNMS------ALRLYSTEKQPEEATEQK--AT--ESSPEL 55
Query: 242 ESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADT 421
E LT E+ + KEQ ++ DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDLLEVADT
Sbjct: 56 EKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADT 115
Query: 422 LTXXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHE 601
L L+ L++G+ +TRA L QVF RHGL + P+ +KFDPN HE
Sbjct: 116 L--GHATQAVPKDKLSGNTDLKNLYEGLTMTRASLLQVFKRHGLESLDPINQKFDPNQHE 173
Query: 602 ALFQ 613
ALFQ
Sbjct: 174 ALFQ 177
>AY060856-1|AAL28404.1| 183|Drosophila melanogaster GM03203p
protein.
Length = 183
Score = 94.3 bits (224), Expect = 1e-19
Identities = 56/121 (46%), Positives = 73/121 (60%)
Frame = +2
Query: 62 ALKAYTFGRIAKYLADTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQI 241
AL FGR +L + N++ ++R S EK E + K AT E ++
Sbjct: 6 ALPLQMFGRRLVHLRSSVTSQNMS------ALRLYSTEKQPEEATEQK--AT--ESSPEV 55
Query: 242 ESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADT 421
E LT E+ + KEQ ++ DKYKR+LAD EN+R R+ KQ+ DAK F IQSFCKDLLEVADT
Sbjct: 56 EKLTKELATAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADT 115
Query: 422 L 424
L
Sbjct: 116 L 116
>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
protein.
Length = 4167
Score = 34.7 bits (76), Expect = 0.100
Identities = 22/87 (25%), Positives = 47/87 (54%)
Frame = +2
Query: 56 IMALKAYTFGRIAKYLADTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHK 235
IMA++ Y G++ + +A + + +K+ AL+A K + ++L IEE ++
Sbjct: 2945 IMAIENY--GKVYRIVAPKQEKLDSAMKSLEEKQAALAAAK----KKLEELQVVIEELYR 2998
Query: 236 QIESLTNEVNSIKEQFNDINDKYKRAL 316
Q+E TN +N ++ + + + +RA+
Sbjct: 2999 QLEEKTNLLNELRAKEERLRKQLERAI 3025
>X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin C
protein protein.
Length = 621
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 191 ESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALAD 322
E ND L +++ K+ N + ++N++N KY +ALAD
Sbjct: 126 EENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQALAD 169
>L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like
protein protein.
Length = 621
Score = 32.3 bits (70), Expect = 0.53
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 191 ESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALAD 322
E ND L +++ K+ N + ++N++N KY ++LAD
Sbjct: 126 EENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLAD 169
>AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p
protein.
Length = 621
Score = 32.3 bits (70), Expect = 0.53
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 191 ESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALAD 322
E ND L +++ K+ N + ++N++N KY ++LAD
Sbjct: 126 EENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLAD 169
>AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-PA
protein.
Length = 621
Score = 32.3 bits (70), Expect = 0.53
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 191 ESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALAD 322
E ND L +++ K+ N + ++N++N KY ++LAD
Sbjct: 126 EENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLAD 169
>AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p protein.
Length = 1689
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +2
Query: 212 ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 388
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 923 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 980
>AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC,
isoform C protein.
Length = 1652
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +2
Query: 212 ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 388
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 886 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 943
>AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD,
isoform D protein.
Length = 1677
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +2
Query: 212 ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 388
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 911 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 968
>AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB,
isoform B protein.
Length = 1689
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +2
Query: 212 ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 388
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 923 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 980
>AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA,
isoform A protein.
Length = 1690
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +2
Query: 212 ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 388
A + CH +ES T ++ + +N +Y + A+ +++ + +K++ D +Q+
Sbjct: 924 AALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDK-VKEITDTLHAELQA 981
>BT023107-1|AAY55523.1| 396|Drosophila melanogaster IP10876p
protein.
Length = 396
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 128 LTIKTFRPSVRALSAEKPAESESNDKLPATIEEC 229
L + T+ P LS E E++DKL IEEC
Sbjct: 347 LFLSTYLPMSVGLSLETATNEETDDKLQDFIEEC 380
>AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p protein.
Length = 1489
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 176 KPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALA 319
K SES +L ATI +Q+++ I+E+ N Y +A
Sbjct: 1011 KAQNSESETQLQATISNLREQLDAYKQTEQGIQEKLQATNSSYTTQIA 1058
>AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA
protein.
Length = 1489
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 176 KPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALA 319
K SES +L ATI +Q+++ I+E+ N Y +A
Sbjct: 1011 KAQNSESETQLQATISNLREQLDAYKQTEQGIQEKLQATNSSYTTQIA 1058
>K03277-1|AAA28973.1| 284|Drosophila melanogaster protein ( D.
melanogaster tropomyosinI gene, exons 2-5, complete cds.
).
Length = 284
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 83 GRIAKYLADTTLRPNLTIKTFRPSVRALSAE-KPAESESNDKLPATIEECHKQIESLTNE 259
G K L + + N ++ F+ ++ LS + K AE + E KQ++ L E
Sbjct: 201 GNSLKSLEVSEEKANQRVEEFKREMKTLSIKLKEAEQRA--------EHAEKQVKRLQKE 252
Query: 260 VNSIKEQFNDINDKYKRALAD 322
V+ ++++ D+YK +LAD
Sbjct: 253 VDRLEDELGINKDRYK-SLAD 272
>AE014297-2003|AAN13653.1| 284|Drosophila melanogaster CG4843-PB,
isoform B protein.
Length = 284
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 83 GRIAKYLADTTLRPNLTIKTFRPSVRALSAE-KPAESESNDKLPATIEECHKQIESLTNE 259
G K L + + N ++ F+ ++ LS + K AE + E KQ++ L E
Sbjct: 201 GNSLKSLEVSEEKANQRVEEFKREMKTLSIKLKEAEQRA--------EHAEKQVKRLQKE 252
Query: 260 VNSIKEQFNDINDKYKRALAD 322
V+ ++++ D+YK +LAD
Sbjct: 253 VDRLEDELGINKDRYK-SLAD 272
>AE014297-2002|AAN13652.1| 284|Drosophila melanogaster CG4843-PA,
isoform A protein.
Length = 284
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 83 GRIAKYLADTTLRPNLTIKTFRPSVRALSAE-KPAESESNDKLPATIEECHKQIESLTNE 259
G K L + + N ++ F+ ++ LS + K AE + E KQ++ L E
Sbjct: 201 GNSLKSLEVSEEKANQRVEEFKREMKTLSIKLKEAEQRA--------EHAEKQVKRLQKE 252
Query: 260 VNSIKEQFNDINDKYKRALAD 322
V+ ++++ D+YK +LAD
Sbjct: 253 VDRLEDELGINKDRYK-SLAD 272
>AE014296-2260|AAF49830.1| 236|Drosophila melanogaster CG14111-PA
protein.
Length = 236
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +2
Query: 140 TFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDIND 298
T + +++A E+ + ND+LPA E+ + + N ++ +K+Q D+ +
Sbjct: 54 TAKSAIQAHEIEEEDDDFHNDRLPALSEDEYNNLSEDANPLHFLKQQPLDLEN 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,747,055
Number of Sequences: 53049
Number of extensions: 462622
Number of successful extensions: 1615
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -