Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27a12
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46996-6|CAA87101.1| 237|Caenorhabditis elegans Hypothetical pr... 119 2e-27
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 33 0.16
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 33 0.16
U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical pr... 31 0.49
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 31 0.49
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 31 0.49
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 31 0.49
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 31 0.49
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 31 0.65
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 30 1.1
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 30 1.1
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 1.5
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 1.5
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 1.5
Z75529-8|CAA99788.2| 350|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF068720-9|AAM15584.1| 209|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 29 3.5
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 29 3.5
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 29 3.5
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 28 4.6
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 28 4.6
Z99283-3|CAB16538.1| 327|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 6.0
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 6.0
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 28 6.0
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 28 6.0
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 28 6.0
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 28 6.0
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 28 6.0
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 28 6.0
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 28 6.0
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 27 8.0
U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of... 27 8.0
L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein. 27 8.0
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 27 8.0
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 27 8.0
>Z46996-6|CAA87101.1| 237|Caenorhabditis elegans Hypothetical
protein C34C12.8 protein.
Length = 237
Score = 119 bits (286), Expect = 2e-27
Identities = 60/122 (49%), Positives = 78/122 (63%)
Frame = +2
Query: 248 LTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTLT 427
L E + ++ + D DKY+R+LA+ ENVR+R +KQ +DAK FAIQSFCKDLLEV+D L
Sbjct: 79 LLKEYDDLQAESLDFKDKYQRSLAETENVRRRGIKQTDDAKVFAIQSFCKDLLEVSDIL- 137
Query: 428 XXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHEAL 607
L+ L +GV +TR + + FA+HGLV V P EKFDPNLHEA+
Sbjct: 138 DIAVKSVKPEDLESGGKALKDLFEGVSMTRTVMAKTFAKHGLVTVDPTNEKFDPNLHEAV 197
Query: 608 FQ 613
FQ
Sbjct: 198 FQ 199
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/79 (21%), Positives = 39/79 (49%)
Frame = +2
Query: 134 IKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRA 313
I+ SVR + E S ++D+ I+ ++++SLT E+ S + + + + +
Sbjct: 562 IREASESVRVMKREMTEASITSDR---QIQSLKEKVDSLTRELESSRRRMEQLQEDQTKF 618
Query: 314 LADGENVRKRMLKQVEDAK 370
L + + M+K + +A+
Sbjct: 619 LGSHDETKAEMMKDLHEAQ 637
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/79 (21%), Positives = 39/79 (49%)
Frame = +2
Query: 134 IKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRA 313
I+ SVR + E S ++D+ I+ ++++SLT E+ S + + + + +
Sbjct: 562 IREASESVRVMKREMTEASITSDR---QIQSLKEKVDSLTRELESSRRRMEQLQEDQTKF 618
Query: 314 LADGENVRKRMLKQVEDAK 370
L + + M+K + +A+
Sbjct: 619 LGSHDETKAEMMKDLHEAQ 637
>U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical
protein B0286.1 protein.
Length = 230
Score = 31.5 bits (68), Expect = 0.49
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +2
Query: 158 RALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVR 337
+ L E + + N+K E K IE E+ +KE+ + +K K +D +
Sbjct: 66 QTLKEEPKEQKKENNK---NDENSKKTIEKYEQEIAGLKEKIEGLEEKVKNNYSDENSSL 122
Query: 338 KRMLKQVE 361
K LKQ E
Sbjct: 123 KEELKQCE 130
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 31.5 bits (68), Expect = 0.49
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 200 DKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFA 379
DKL +++ ++SL E++S+KEQ N + K L E + ++ ++++
Sbjct: 742 DKLTNELKQKGVTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVK 801
Query: 380 IQSFCKD 400
+Q KD
Sbjct: 802 LQLAEKD 808
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 31.5 bits (68), Expect = 0.49
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 200 DKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFA 379
DKL +++ ++SL E++S+KEQ N + K L E + ++ ++++
Sbjct: 742 DKLTNELKQKGVTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVK 801
Query: 380 IQSFCKD 400
+Q KD
Sbjct: 802 LQLAEKD 808
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 31.5 bits (68), Expect = 0.49
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 200 DKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFA 379
DKL +++ ++SL E++S+KEQ N + K L E + ++ ++++
Sbjct: 502 DKLTNELKQKGVTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVK 561
Query: 380 IQSFCKD 400
+Q KD
Sbjct: 562 LQLAEKD 568
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 31.5 bits (68), Expect = 0.49
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 200 DKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFA 379
DKL +++ ++SL E++S+KEQ N + K L E + ++ ++++
Sbjct: 742 DKLTNELKQKGVTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVK 801
Query: 380 IQSFCKD 400
+Q KD
Sbjct: 802 LQLAEKD 808
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 31.1 bits (67), Expect = 0.65
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +2
Query: 257 EVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLE 409
+VNSI + ++I DKY+R + GE RKR L+ E K + + DL E
Sbjct: 1052 QVNSIGGKQSEIEDKYQRLMMLGE-TRKRKLE--EACKGYQLLREANDLAE 1099
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 30.7 bits (66), Expect = 0.86
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 158 RALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALAD 322
R EKP E + ++ L A + + ++ E +++ K+ DIN+ AL+D
Sbjct: 177 RVPKVEKPEEKDIDESLNAALSDKKEKKEVASDKKKESKKDEEDINESMNAALSD 231
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/101 (20%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = +2
Query: 134 IKTFRPSVRALSAEKPAESESNDK-LPATIEECHKQIESLTNEVNSIKEQFNDIND---K 301
I+ V+ L+A ++ D + E K+++ L NE+N +QF+ + + +
Sbjct: 920 IEGLEAEVKKLTAANETKAVKADTDARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTR 979
Query: 302 YKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTL 424
K + EN + ++ KQ+++ + SF +++ + L
Sbjct: 980 LKTSKETAENGQLQVQKQMDEEDRRSEFSFKEEIASLKQKL 1020
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/101 (20%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = +2
Query: 134 IKTFRPSVRALSAEKPAESESNDK-LPATIEECHKQIESLTNEVNSIKEQFNDIND---K 301
I+ V+ L+A ++ D + E K+++ L NE+N +QF+ + + +
Sbjct: 920 IEGLEAEVKKLTAANETKAVKADTDARKVVRELQKEVKQLYNELNDKNQQFDMVQEELTR 979
Query: 302 YKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTL 424
K + EN + ++ KQ+++ + SF +++ + L
Sbjct: 980 LKTSKETAENGQLQVQKQMDEEDRRSEFSFKEEIASLKQKL 1020
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 104 ADTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQF 283
+D + + I ++R L+ + + +++ I S E+N+ KE+
Sbjct: 322 SDQVKQQQIQITNLERTIRVLNDKINCNDVFRSDVEEKLDKLKDDISSREREINAQKEEV 381
Query: 284 NDIND-----KYKRALADGENVRKRMLKQVE-DAKSFAIQSFCKDLL 406
N I D K KR + E +R+R Q E +++ I++F K L+
Sbjct: 382 NRIKDSLRLEKSKRNELEEEVLRQRRCAQEEIESRDQEIEAFRKMLV 428
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/104 (22%), Positives = 48/104 (46%)
Frame = +2
Query: 104 ADTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQF 283
A+ T+ L K+F LS E+ L E+ +K + + +E S+K+
Sbjct: 344 AEGTVTVKLFEKSFFMKYGRLSDEQQVNLLETKYLGGKAEKVYKGL--MESEKTSVKQIL 401
Query: 284 NDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVA 415
+ ++D+ + + D K+ ++ ++ +I+ FC L E+A
Sbjct: 402 HALSDRLRISFEDETAKAKKKWATIKILENQSIEDFCLKLDEIA 445
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 197 NDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKS 373
ND+L TI+ +I L NE++S + +ND +R + +++ + LK D ++
Sbjct: 832 NDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQA 890
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 218 IEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVR---KRMLKQVEDAKS 373
IE K I ++ ++ + ++ND++KR L EN + +R ++++ED S
Sbjct: 1058 IERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELS 1112
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 197 NDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKS 373
ND+L TI+ +I L NE++S + +ND +R + +++ + LK D ++
Sbjct: 905 NDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQA 963
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 218 IEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVR---KRMLKQVEDAKS 373
IE K I ++ ++ + ++ND++KR L EN + +R ++++ED S
Sbjct: 1131 IERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELS 1185
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 197 NDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKS 373
ND+L TI+ +I L NE++S + +ND +R + +++ + LK D ++
Sbjct: 905 NDELDTTIKGHQGKITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQA 963
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 218 IEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVR---KRMLKQVEDAKS 373
IE K I ++ ++ + ++ND++KR L EN + +R ++++ED S
Sbjct: 1131 IERIEKNILDRYHDDELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELS 1185
>Z75529-8|CAA99788.2| 350|Caenorhabditis elegans Hypothetical
protein C44H9.8 protein.
Length = 350
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +2
Query: 170 AEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRML 349
+E P + + N LPA H+Q+ +NSI + D+N+ ++ + E +
Sbjct: 288 SEPPHQGDGNRLLPADNSPLHQQLV----VINSISSSYTDLNNSNEKNV---EKILNNQA 340
Query: 350 KQVEDAKSF 376
+Q E+ K +
Sbjct: 341 EQQEELKHY 349
>AF068720-9|AAM15584.1| 209|Caenorhabditis elegans Hypothetical
protein K02H11.9 protein.
Length = 209
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 215 TIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLK 352
TIE KQ+E L + S ++ F +ND Y A A+ E ++K++ K
Sbjct: 93 TIEILKKQLEKLKLDNESYEKSFFIVNDMY--ATAEIEQMKKKLNK 136
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +2
Query: 119 RPNLT--IKTFRPSVRALSAEKPAESESNDKLPAT---IEECHKQIESLTNEVNSIKEQF 283
RP+L+ ++ PS A S ++ + PA H+Q+E T ++N
Sbjct: 533 RPSLSPQLRQLSPSESASSFDESVNLSFHKLEPAEHAGYVMAHQQMEKTTAQLNERANAV 592
Query: 284 NDINDKYKRALADGENVRKRMLKQ 355
++I + + +AD N ++R + Q
Sbjct: 593 SNIRTQMEEKIADSSNSKQRPISQ 616
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 203 KLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRK--RMLKQVEDAKSF 376
KL ++++ +QIE+L E ++ DIN++ + + V K R L+Q +D
Sbjct: 1490 KLRSSMDNLSEQIETLRRENKIFSQEIRDINEQITQGGRTYQEVHKSVRRLEQEKDELQH 1549
Query: 377 AI 382
A+
Sbjct: 1550 AL 1551
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 203 KLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRK--RMLKQVEDAKSF 376
KL ++++ +QIE+L E ++ DIN++ + + V K R L+Q +D
Sbjct: 1490 KLRSSMDNLSEQIETLRRENKIFSQEIRDINEQITQGGRTYQEVHKSVRRLEQEKDELQH 1549
Query: 377 AI 382
A+
Sbjct: 1550 AL 1551
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 203 KLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRK--RMLKQVEDAKSF 376
KL ++++ +QIE+L E ++ DIN++ + + V K R L+Q +D
Sbjct: 1490 KLRSSMDNLSEQIETLRRENKIFSQEIRDINEQITQGGRTYQEVHKSVRRLEQEKDELQH 1549
Query: 377 AI 382
A+
Sbjct: 1550 AL 1551
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 191 ESNDKLPATIEECHKQIESLTNEVNS-IKEQFNDINDKYKRALAD-GENVRKRMLKQVED 364
E D+LPA ++E +I + NEV S + IND ++R + E RK K +++
Sbjct: 9 EMLDELPAELKERSDEIRRIDNEVESRLNRNREAINDFFERTGVNMPEEQRKERCKVLQE 68
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 28.3 bits (60), Expect = 4.6
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +2
Query: 134 IKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDIN---DKY 304
+KT + L+ E + DK + +EE +K+I + +N +KE+ + KY
Sbjct: 408 LKTLEMANLDLTNELASMGSLLDKERSLLEEKNKEISERDSSINDLKEKLAESEKKATKY 467
Query: 305 KRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLE 409
K L + ++ + + Q+ +Q KDL+E
Sbjct: 468 KNELKEHADLVENLTLQLN-----KLQENSKDLME 497
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 28.3 bits (60), Expect = 4.6
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +2
Query: 134 IKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDIN---DKY 304
+KT + L+ E + DK + +EE +K+I + +N +KE+ + KY
Sbjct: 410 LKTLEMANLDLTNELASMGSLLDKERSLLEEKNKEISERDSSINDLKEKLAESEKKATKY 469
Query: 305 KRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLE 409
K L + ++ + + Q+ +Q KDL+E
Sbjct: 470 KNELKEHADLVENLTLQLN-----KLQENSKDLME 499
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 28.3 bits (60), Expect = 4.6
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +2
Query: 134 IKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDIN---DKY 304
+KT + L+ E + DK + +EE +K+I + +N +KE+ + KY
Sbjct: 410 LKTLEMANLDLTNELASMGSLLDKERSLLEEKNKEISERDSSINDLKEKLAESEKKATKY 469
Query: 305 KRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLE 409
K L + ++ + + Q+ +Q KDL+E
Sbjct: 470 KNELKEHADLVENLTLQLN-----KLQENSKDLME 499
>Z99283-3|CAB16538.1| 327|Caenorhabditis elegans Hypothetical
protein Y70C5C.4 protein.
Length = 327
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 400 ILAEALYGKGLSVFDLFQHPLPYILAVR*RSLVFVINVIELFF 272
+L A G+ L V D FQ P+P + SL+ + LFF
Sbjct: 74 LLYSACLGRALGVLDYFQVPIPVQIYFGITSLLVTAVAVLLFF 116
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Frame = +2
Query: 116 LRPNLTIKTFRPSVRALSAEKPAESESN--------DKLPATIEECHKQIESLTNEVNSI 271
LR + + R + EK E E+ + + AT+E KQ E +
Sbjct: 1572 LRAQIEVSQIRSEIEKRIQEKEEEFENTRRNHQRALESMQATLEAETKQKEEALRIKKKL 1631
Query: 272 KEQFNDIN---DKYKRALADGENVRKRMLKQVED 364
+ ND+ D RA AD + K+ ++ V++
Sbjct: 1632 ESDINDLEIALDHANRAYADAQKTIKKYMETVQE 1665
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Frame = +2
Query: 116 LRPNLTIKTFRPSVRALSAEKPAESESN--------DKLPATIEECHKQIESLTNEVNSI 271
LR + + R + EK E E+ + + AT+E KQ E +
Sbjct: 1572 LRAQIEVSQIRSEIEKRIQEKEEEFENTRRNHQRALESMQATLEAETKQKEEALRIKKKL 1631
Query: 272 KEQFNDIN---DKYKRALADGENVRKRMLKQVED 364
+ ND+ D RA AD + K+ ++ V++
Sbjct: 1632 ESDINDLEIALDHANRAYADAQKTIKKYMETVQE 1665
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 140 TFRPSVRALSAEKPAESESNDKLP-ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRA 313
+FRP + PA+S S +LP AT E + +E E+ + E + + K A
Sbjct: 380 SFRPPTEPSALHHPAQSVSTPQLPEATSMEIKEALEGENEEMKQLAESIQSMLVERKTA 438
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 140 TFRPSVRALSAEKPAESESNDKLP-ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRA 313
+FRP + PA+S S +LP AT E + +E E+ + E + + K A
Sbjct: 380 SFRPPTEPSALHHPAQSVSTPQLPEATSMEIKEALEGENEEMKQLAESIQSMLVERKTA 438
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
R07G3.3c protein.
Length = 1316
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 125 NLTIKT-FRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDK 301
NL ++T AL AE A+ E++ IE + ++ T E+NSI+E+ +
Sbjct: 1045 NLRLQTELNNKCAALVAESTAKREADQM----IEHAERLLQKKTEELNSIEEENRQKQAE 1100
Query: 302 YKRALA 319
Y LA
Sbjct: 1101 YDEKLA 1106
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 125 NLTIKT-FRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDK 301
NL ++T AL AE A+ E++ IE + ++ T E+NSI+E+ +
Sbjct: 1045 NLRLQTELNNKCAALVAESTAKREADQM----IEHAERLLQKKTEELNSIEEENRQKQAE 1100
Query: 302 YKRALA 319
Y LA
Sbjct: 1101 YDEKLA 1106
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 125 NLTIKT-FRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDK 301
NL ++T AL AE A+ E++ IE + ++ T E+NSI+E+ +
Sbjct: 1045 NLRLQTELNNKCAALVAESTAKREADQM----IEHAERLLQKKTEELNSIEEENRQKQAE 1100
Query: 302 YKRALA 319
Y LA
Sbjct: 1101 YDEKLA 1106
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 140 TFRPSVRALSAEKPAESESNDKLP-ATIEECHKQIESLTNEVNSIKEQFNDINDKYKRA 313
+FRP + PA+S S +LP AT E + +E E+ + E + + K A
Sbjct: 425 SFRPPTEPSALHHPAQSVSTPQLPEATSMEIKEALEGENEEMKQLAESIQSMLVERKTA 483
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/50 (24%), Positives = 31/50 (62%)
Frame = +2
Query: 191 ESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRK 340
+S D+L + ++C +E +++ +KE+F ++++K+K + E V++
Sbjct: 192 KSADELASLRQKCG-DLEKQVEKLSGVKEEFEEMSEKFKELEDEVELVKE 240
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 215 TIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 388
T + HK E+L + S+KE ++ D+ K + + K + Q + S A +S
Sbjct: 110 TGDNAHKTGEALNDNYESVKESASEAADRLKEPAQNTADNAKDLANQTGEEMSDAFES 167
>U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of
certain neuronsprotein 1 protein.
Length = 778
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/80 (21%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 167 SAEKPAESESNDKLPATIEECHKQI-ESLTNEV--NSIKEQFNDINDKYKRALADGENVR 337
+A+ ++SE K P + H + + E+ I+E ++ K + ++ R
Sbjct: 154 NAKTHSKSEGEKKKPKVSRKQHSDASQQMVRELFAKEIEEGMVELKKSNKTLQSQNKSGR 213
Query: 338 KRMLKQVEDAKSFAIQSFCK 397
+R + +E+ + AI++ CK
Sbjct: 214 RRSQRSIENRRYEAIEAHCK 233
>L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein.
Length = 778
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/80 (21%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 167 SAEKPAESESNDKLPATIEECHKQI-ESLTNEV--NSIKEQFNDINDKYKRALADGENVR 337
+A+ ++SE K P + H + + E+ I+E ++ K + ++ R
Sbjct: 154 NAKTHSKSEGEKKKPKVSRKQHSDASQQMVRELFAKEIEEGMVELKKSNKTLQSQNKSGR 213
Query: 338 KRMLKQVEDAKSFAIQSFCK 397
+R + +E+ + AI++ CK
Sbjct: 214 RRSQRSIENRRYEAIEAHCK 233
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 215 TIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQS 388
T + HK E+L + S+KE ++ D+ K + + K + Q + S A +S
Sbjct: 110 TGDNAHKTGEALNDNYESVKESASEAADRLKEPAQNTADNAKDLANQTGEEMSDAFES 167
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 107 DTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKE-QF 283
D T+ + I S+ L+ EK + + ++L TIE+ + + +E+N +K+ +F
Sbjct: 412 DPTMTLQMRILQLEHSIEQLNDEKEKQKKVMEELQFTIEQKDENNGEVLSELNRLKDAKF 471
Query: 284 NDINDKYKR 310
++ R
Sbjct: 472 GSAREEITR 480
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,586,850
Number of Sequences: 27780
Number of extensions: 234293
Number of successful extensions: 934
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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