Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27a04
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   0.26 
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    26   1.2  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.2  
AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    24   5.0  
Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.        23   8.8  
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    23   8.8  

>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect(2) = 0.26
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +1

Query: 19  SLSRTFYNSIHRF--NCFKGLISEYNVLYSSDD 111
           +L++ +   +H+   NC KG  +EY +  +S D
Sbjct: 98  NLTQLYLTLLHQIQPNCEKGCKTEYTIAQTSSD 130



 Score = 23.0 bits (47), Expect(2) = 0.26
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 220 YNLRLLHYSRR*HFLEAHE*CQICE 294
           Y L+ LH   R ++ E H+  Q CE
Sbjct: 138 YGLQQLHVMERNNWKETHQLIQECE 162


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 384 PRVSVIEELYQFSAHTKLKLSW 449
           P++S+I  L Q SA  KLKLSW
Sbjct: 374 PQISIIL-LQQLSAAMKLKLSW 394



 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 120 RATIVTTIQYIIFRNQTFKTIEAVD*IIKRST 25
           R+ + T I+Y+  RNQ F  ++A    +++ST
Sbjct: 422 RSDLRTMIRYMFSRNQRFNMVDAALSPMQKST 453


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 284 RYVRELDFARFHFYDRTGIYTNIKAVDGHALQG 382
           R  R LD+ R HFY     + N+ AVD  A+QG
Sbjct: 230 RLARALDYERQHFY-----HINVLAVD-RAIQG 256



 Score = 23.0 bits (47), Expect = 8.8
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -1

Query: 316  ESRKI*FPHISGIIHVPQENVNVLSSAKAVNCSRIID 206
            ESR   F HI  +IHV  +N NV    K   CS I +
Sbjct: 1149 ESRNA-FKHI--LIHVLDDNDNVPVIQKPSGCSMITE 1182


>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 350 IKAVDGHALQGASSIRYRRTIPIFSPYKVETKLVYWED 463
           I  + G   +G   I++   +PIFS  K E +   +ED
Sbjct: 49  IGKMGGTQKRGEKKIKFEEFLPIFSQVKKEKEQGCFED 86


>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 582 GIPLNSAAASTLRRFCRDNTMALTKPSFR 496
           G  L    A   R+  RDN    TKP+ R
Sbjct: 8   GKGLGKGGARRHRKVLRDNIQGTTKPAIR 36


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 368 DRPQLLYLY-RYQSDRRNGISQNLIPS 291
           D  Q LY Y + + +R  GISQ ++PS
Sbjct: 58  DIHQELYRYFKQRGERYGGISQFIVPS 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,387
Number of Sequences: 2352
Number of extensions: 15684
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)