Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27a04
(673 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019104-1|AAH19104.1| 208|Homo sapiens C8orf55 protein protein. 115 2e-25
BC001311-1|AAH01311.1| 208|Homo sapiens chromosome 8 open readi... 115 2e-25
AF242773-1|AAF65450.1| 208|Homo sapiens mesenchymal stem cell p... 115 2e-25
AK075407-1|BAC11600.1| 208|Homo sapiens protein ( Homo sapiens ... 112 1e-24
BC139755-1|AAI39756.1| 793|Homo sapiens SLCO5A1 protein protein. 30 8.7
AF205075-1|AAG42207.1| 848|Homo sapiens organic anion transport... 30 8.7
>BC019104-1|AAH19104.1| 208|Homo sapiens C8orf55 protein protein.
Length = 208
Score = 115 bits (276), Expect = 2e-25
Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Frame = +2
Query: 89 MYCIVVTIVALA---YIFWDVNYFLRIAFTIGIGRLFQKKC-GINDSTTIYGFCTTQDVD 256
M ++V ++AL + DV Y +R+ + RL Q + + G D+D
Sbjct: 1 MLGLLVALLALGLAVFALLDVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLD 60
Query: 257 IFLRHMNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKV 436
+ L HMNNARY+RE DFAR R G+ ++ + H + AS R+RR++ + P++V
Sbjct: 61 LLL-HMNNARYLREADFARVAHLTRCGVLGALRQLRAHTVLAASCARHRRSLRLLEPFEV 119
Query: 437 ETKLVYWEDKTLFIEQKFITLNDGFVRAIVLSRQNLLNVDAAALFKGIPGADXK-PECPE 613
T+L+ W+D+ ++E +F++L DGFV A++ RQ+LL + + + + PE P
Sbjct: 120 RTRLLGWDDRAFYLEARFVSLRDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPA 179
Query: 614 EIKHWLQSIEVSSAKLR 664
+++HW+ E SS LR
Sbjct: 180 DLQHWISYNEASSQLLR 196
>BC001311-1|AAH01311.1| 208|Homo sapiens chromosome 8 open reading
frame 55 protein.
Length = 208
Score = 115 bits (276), Expect = 2e-25
Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Frame = +2
Query: 89 MYCIVVTIVALA---YIFWDVNYFLRIAFTIGIGRLFQKKC-GINDSTTIYGFCTTQDVD 256
M ++V ++AL + DV Y +R+ + RL Q + + G D+D
Sbjct: 1 MLGLLVALLALGLAVFALLDVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLD 60
Query: 257 IFLRHMNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKV 436
+ L HMNNARY+RE DFAR R G+ ++ + H + AS R+RR++ + P++V
Sbjct: 61 LLL-HMNNARYLREADFARVAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEPFEV 119
Query: 437 ETKLVYWEDKTLFIEQKFITLNDGFVRAIVLSRQNLLNVDAAALFKGIPGADXK-PECPE 613
T+L+ W+D+ ++E +F++L DGFV A++ RQ+LL + + + + PE P
Sbjct: 120 RTRLLGWDDRAFYLEARFVSLRDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPA 179
Query: 614 EIKHWLQSIEVSSAKLR 664
+++HW+ E SS LR
Sbjct: 180 DLQHWISYNEASSQLLR 196
>AF242773-1|AAF65450.1| 208|Homo sapiens mesenchymal stem cell
protein DSCD75 protein.
Length = 208
Score = 115 bits (276), Expect = 2e-25
Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Frame = +2
Query: 89 MYCIVVTIVALA---YIFWDVNYFLRIAFTIGIGRLFQKKC-GINDSTTIYGFCTTQDVD 256
M ++V ++AL + DV Y +R+ + RL Q + + G D+D
Sbjct: 1 MLGLLVALLALGLAVFALLDVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLD 60
Query: 257 IFLRHMNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKV 436
+ L HMNNARY+RE DFAR R G+ ++ + H + AS R+RR++ + P++V
Sbjct: 61 LLL-HMNNARYLREADFARVAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEPFEV 119
Query: 437 ETKLVYWEDKTLFIEQKFITLNDGFVRAIVLSRQNLLNVDAAALFKGIPGADXK-PECPE 613
T+L+ W+D+ ++E +F++L DGFV A++ RQ+LL + + + + PE P
Sbjct: 120 RTRLLGWDDRAFYLEARFVSLRDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPA 179
Query: 614 EIKHWLQSIEVSSAKLR 664
+++HW+ E SS LR
Sbjct: 180 DLQHWISYNEASSQLLR 196
>AK075407-1|BAC11600.1| 208|Homo sapiens protein ( Homo sapiens
cDNA PSEC0098 fis, clone NT2RP2002695, highly similar to
Mesenchymal stem cell protein DSCD75. ).
Length = 208
Score = 112 bits (269), Expect = 1e-24
Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
Frame = +2
Query: 89 MYCIVVTIVALA---YIFWDVNYFLRIAFTIGIGRLFQKKC-GINDSTTIYGFCTTQDVD 256
M ++V ++AL + V Y +R+ + RL Q + + G D+D
Sbjct: 1 MLGLLVALLALGLAVFALLGVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLD 60
Query: 257 IFLRHMNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKV 436
+ L HMNNARY+RE DFAR R G+ ++ + H + AS R+RR++ + P++V
Sbjct: 61 LLL-HMNNARYLREADFARVAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEPFEV 119
Query: 437 ETKLVYWEDKTLFIEQKFITLNDGFVRAIVLSRQNLLNVDAAALFKGIPGADXK-PECPE 613
T+L+ W+D+ ++E +F++L DGFV A++ RQ+LL + + + + PE P
Sbjct: 120 RTRLLGWDDRAFYLEARFVSLRDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPA 179
Query: 614 EIKHWLQSIEVSSAKLR 664
+++HW+ E SS LR
Sbjct: 180 DLQHWISYNEASSQLLR 196
>BC139755-1|AAI39756.1| 793|Homo sapiens SLCO5A1 protein protein.
Length = 793
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 286 ICEGIRFCEIPFLRSDWYLYKYKSCGRSRSTRSLEYPLS 402
+ G++F F+ WY KYK G R R E+PLS
Sbjct: 686 LAAGLKFVGFIFIFLAWYSIKYKEDGLQR-RRQREFPLS 723
>AF205075-1|AAG42207.1| 848|Homo sapiens organic anion transporter
polypeptide-related protein 4 protein.
Length = 848
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 286 ICEGIRFCEIPFLRSDWYLYKYKSCGRSRSTRSLEYPLS 402
+ G++F F+ WY KYK G R R E+PLS
Sbjct: 741 LAAGLKFVGFIFIFLAWYSIKYKEDGLQR-RRQREFPLS 778
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,586,051
Number of Sequences: 237096
Number of extensions: 2136213
Number of successful extensions: 3587
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3587
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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