Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27a04
(673 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55854-11|AAT81209.1| 570|Caenorhabditis elegans Map kinase pro... 29 2.3
U55854-10|AAN60533.1| 426|Caenorhabditis elegans Map kinase pro... 29 2.3
U55854-9|AAA98016.3| 605|Caenorhabditis elegans Map kinase prot... 29 2.3
AF067937-4|AAF99911.2| 352|Caenorhabditis elegans Hypothetical ... 29 2.3
Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical pr... 29 3.0
U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z72501-1|CAA96582.1| 584|Caenorhabditis elegans Hypothetical pr... 27 9.2
U28412-2|AAL56625.1| 501|Caenorhabditis elegans Hypothetical pr... 27 9.2
L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated p... 27 9.2
AF000261-2|AAB52925.1| 313|Caenorhabditis elegans Hypothetical ... 27 9.2
>U55854-11|AAT81209.1| 570|Caenorhabditis elegans Map kinase
protein 2, isoform c protein.
Length = 570
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 272 MNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLV 451
+N +R DF Y + V GH Q S+ YR +FS + +TK+
Sbjct: 155 LNGDCLLRIADFGMARAYASASTVRDDANVGGHMTQYVSTRWYRAPEILFSMVEYDTKVD 214
Query: 452 YWEDKTLFIE 481
W +F E
Sbjct: 215 LWSAGCIFAE 224
>U55854-10|AAN60533.1| 426|Caenorhabditis elegans Map kinase
protein 2, isoform b protein.
Length = 426
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 272 MNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLV 451
+N +R DF Y + V GH Q S+ YR +FS + +TK+
Sbjct: 190 LNGDCLLRIADFGMARAYASASTVRDDANVGGHMTQYVSTRWYRAPEILFSMVEYDTKVD 249
Query: 452 YWEDKTLFIE 481
W +F E
Sbjct: 250 LWSAGCIFAE 259
>U55854-9|AAA98016.3| 605|Caenorhabditis elegans Map kinase protein
2, isoform a protein.
Length = 605
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 272 MNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLV 451
+N +R DF Y + V GH Q S+ YR +FS + +TK+
Sbjct: 190 LNGDCLLRIADFGMARAYASASTVRDDANVGGHMTQYVSTRWYRAPEILFSMVEYDTKVD 249
Query: 452 YWEDKTLFIE 481
W +F E
Sbjct: 250 LWSAGCIFAE 259
>AF067937-4|AAF99911.2| 352|Caenorhabditis elegans Hypothetical
protein F22F7.6 protein.
Length = 352
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 155 RIAFTIGI-GRLFQKKCGINDSTTIYGFCTTQDVDIFLRHMNNARYVRELD 304
R +T + +F GI + TIY T + + + ARYVRE+D
Sbjct: 286 RAGYTFHVPSHVFDVHEGIKHTNTIYSKATIAHQEAYAMDIAGARYVREMD 336
>Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical
protein F09B9.1 protein.
Length = 710
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 521 IVLSRQNLLNVDAAALFKGIPGADXKPECPEEIKHWLQSIE----VSSAKLRKK 670
++LS + +D +FK P P+C + + W++S+E VS A L+K+
Sbjct: 10 LLLSTSGAVTLDWKDIFKPKPLHGLSPQCLNDTQTWIKSLELFAGVSEACLKKQ 63
>U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical
protein C03B1.13 protein.
Length = 436
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 1 ECVFVVSLSRTFYNSIHRFNCFKGLISEYNVL 96
EC+ S+ FY+ R N ++ LIS Y ++
Sbjct: 157 ECIHEAIHSKLFYHGTERSNSYRPLISNYEMM 188
>Z72501-1|CAA96582.1| 584|Caenorhabditis elegans Hypothetical
protein C04C11.2 protein.
Length = 584
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 260 FLRHMNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASS 391
F+R+ A V+E +F + H Y +T + +GH + G ++
Sbjct: 120 FIRYFIRASLVQEDEFEKIHEYYVKKAFTLVSPSEGHIVTGEAA 163
>U28412-2|AAL56625.1| 501|Caenorhabditis elegans Hypothetical
protein T19C3.1 protein.
Length = 501
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 34 FYNSIHRFNCFKGLISEYNVLYSSD 108
++ IHRF CF +++E V Y D
Sbjct: 6 YFIQIHRFLCFSQILNEMTVSYQLD 30
>L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated
protein 36 protein.
Length = 1249
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Frame = -2
Query: 180 PIPIVN---AILKK*FTS-----QNMYARATI-VTTIQYIIFRNQTFKTIEAVD*IIKRS 28
P+PI N A++ K + Q AR+ + VTT+ Y + N+TF + AV+ +
Sbjct: 515 PVPITNQSFAVMNKMASRRKIRLQKSEARSRMFVTTVSYPVIVNETFMGVAAVNIPLTEV 574
Query: 27 TQRNH 13
Q++H
Sbjct: 575 AQKSH 579
>AF000261-2|AAB52925.1| 313|Caenorhabditis elegans Hypothetical
protein F19B10.5 protein.
Length = 313
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 528 CHDKTSLMWTQLHYSRVFQELIXNLNVQKKLSIGFNL 638
CH K S +W QL+YS + Q+ ++GF++
Sbjct: 148 CH-KLSALWFQLYYSHKAERTAERTEPQQTENLGFSI 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,825,715
Number of Sequences: 27780
Number of extensions: 346606
Number of successful extensions: 914
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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