Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26p06
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 29 3.8
U28993-6|AAK31498.2| 639|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF316599-1|AAG38591.1| 639|Caenorhabditis elegans paracaspase p... 28 5.0
Z77659-6|CAB01167.1| 401|Caenorhabditis elegans Hypothetical pr... 28 6.6
>AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical
protein F28B3.1 protein.
Length = 1539
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 646 ATSLKCIAIQSEPLAESPYAKVDPSSVNLVPESATVP 536
A SLK ++ + AE YA PSS +L+P +P
Sbjct: 58 AVSLKEKKVKQQRSAEEGYASSSPSSASLIPSRPPIP 94
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 450 LQNQNALYVQDGLDGEPRVFLDPN-TLSEDGTVALSGTKFTEDGSTLAYG 596
++ N LY + GL G ++ T +EDGTV ++G K+ + +A G
Sbjct: 93 IKRLNGLY-ESGLKGSSVEYIRGRATFAEDGTVEVNGAKYRGKNTLIAVG 141
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 450 LQNQNALYVQDGLDGEPRVFLDPN-TLSEDGTVALSGTKFTEDGSTLAYG 596
++ N LY + GL G ++ T +EDGTV ++G K+ + +A G
Sbjct: 107 IKRLNGLY-ESGLKGSSVEYIRGRATFAEDGTVEVNGAKYRGKNTLIAVG 155
>Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical
protein R13.2 protein.
Length = 205
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = +3
Query: 186 YPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKITRPYLDACPVQKSINE 365
Y + + D + D G+K P ++P + K + N RPY P+
Sbjct: 42 YESQQSDSSSSVDESGSKTSSPTSMQQNPSQDGRKNRKKGTNLYGRPYCPGRPLSMEERT 101
Query: 366 RLTELWN 386
R+ +L N
Sbjct: 102 RIIQLHN 108
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -2
Query: 629 YSYPIRAAGRKSVRQGGSVFGELGTGKRH---RAVFGQSV 519
+++P+R++G SVR G G+G H + FG SV
Sbjct: 167 FNFPLRSSGSSSVRPGSGSVKRSGSGTFHGTPASAFGDSV 206
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 385 TTLNIHVPSGRAADTSSSRTPVCRTKMRCTCKMVSTANLASSWTRTLCP-KTARWRF 552
TT+ P+ + T+++ TP T + +T+ + T T CP K R+ F
Sbjct: 177 TTMVTSTPTTEKSSTTTTSTPTSEATSTTTAMITTTSGTTENPTTTDCPTKVCRYGF 233
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -2
Query: 629 YSYPIRAAGRKSVRQGGSVFGELGTGKRH---RAVFGQSV 519
+++P+R++G SVR G G+G H + FG SV
Sbjct: 167 FNFPLRSSGSSSVRPGSGSVKRSGSGTFHGTPASAFGDSV 206
>U28993-6|AAK31498.2| 639|Caenorhabditis elegans Hypothetical
protein F22D3.6 protein.
Length = 639
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 147 GTTILSSRNMLYDYPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKI 317
G T+ S L DE +H + P RW+ DP+ TKE E K+
Sbjct: 66 GQTVGSLLARLQFLSRTYEDEFDSIQFHLRRKFKPLRWIPDPEQQVTKEIDEGNIKL 122
>AF316599-1|AAG38591.1| 639|Caenorhabditis elegans paracaspase
protein.
Length = 639
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 147 GTTILSSRNMLYDYPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKI 317
G T+ S L DE +H + P RW+ DP+ TKE E K+
Sbjct: 66 GQTVGSLLARLQFLSRTYEDEFDSIQFHLRRKFKPLRWIPDPEQQVTKEIDEGNIKL 122
>Z77659-6|CAB01167.1| 401|Caenorhabditis elegans Hypothetical
protein F23B12.6 protein.
Length = 401
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +3
Query: 171 NMLYDYPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKITRPYLDACP 344
N Y +R ET++ + + + + +P++ D D E F + YL CP
Sbjct: 21 NFTYSSTEQKRIETMLFENYNSLVLEPFKTTSDEDLAELTIFRQKHASYLLRYLKNCP 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,333,737
Number of Sequences: 27780
Number of extensions: 330874
Number of successful extensions: 1062
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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