Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26o21
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   2.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   3.8  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   5.0  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   5.0  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   5.0  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 481 TSERRLSNSSDGSACSGYSKTSQLVL 558
           T ERRLSN    S    ++K   L+L
Sbjct: 246 TQERRLSNKGSISKLQFHNKDDDLIL 271


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 154 VYRTDRDLTKLSTQQKKRNLLSISGVV 234
           ++ T +DL  L+ + KK+NL  I  +V
Sbjct: 93  IFGTIKDLEDLTAEAKKQNLKVILDLV 119


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 1   ESRCVAPVGCVFRVLLPLLVTNREPYLELTREIIQLHAKHL 123
           E RC A    + RVL   L T+ +   +  RE+I+   K L
Sbjct: 54  EGRCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVIKFL 94


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 1   ESRCVAPVGCVFRVLLPLLVTNREPYLELTREIIQLHAKHL 123
           E RC A    + RVL   L T+ +   +  RE+I+   K L
Sbjct: 54  EGRCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVIKFL 94


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 1   ESRCVAPVGCVFRVLLPLLVTNREPYLELTREIIQLHAKHL 123
           E RC A    + RVL   L T+ +   +  RE+I+   K L
Sbjct: 54  EGRCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVIKFL 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,478
Number of Sequences: 438
Number of extensions: 2586
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)