Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26o15
         (662 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031884-3|CAA21413.1|  658|Drosophila melanogaster EG:23E12.2 p...    29   7.5  
U49439-1|AAB01100.1| 2210|Drosophila melanogaster ASH1 protein.        28   9.9  
U06457-1|AAB19245.1|  196|Drosophila melanogaster transcription ...    28   9.9  
AE014296-3176|AAF49140.2| 2217|Drosophila melanogaster CG8887-PA...    28   9.9  
AE014134-1688|AAF52806.1|  196|Drosophila melanogaster CG4079-PA...    28   9.9  

>AL031884-3|CAA21413.1|  658|Drosophila melanogaster EG:23E12.2
           protein.
          Length = 658

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 473 KITSAQNVRVHRYKAFEKPAKLDSDCIQPGSFAHCVREAVR 595
           ++  +QNVR+  Y+A E+P       ++ G  + C+RE  R
Sbjct: 438 ELEGSQNVRILLYEAKERPLLKAKHILKVGVKSACIREVER 478


>U49439-1|AAB01100.1| 2210|Drosophila melanogaster ASH1 protein.
          Length = 2210

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -3

Query: 615  CICGMYKRTASLTQCAKLPG*MQSLSNFAGFSKALYRCTR 496
            CICG+YK    + QC+K      +    A      Y+C R
Sbjct: 1844 CICGLYKDEGLMIQCSKCMVWQHTECTKADIDADNYQCER 1883


>U06457-1|AAB19245.1|  196|Drosophila melanogaster transcription
           initiation factorTFIID 28 kDa subunit protein.
          Length = 196

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 301 FPAAAVVQRFDVHVGHFVLHNVTIQLCGGIKIFVG 197
           FP AAV +      G  V  NV I + G  K+FVG
Sbjct: 112 FPKAAVKRLMQTITGCSVSQNVVIAMSGIAKVFVG 146


>AE014296-3176|AAF49140.2| 2217|Drosophila melanogaster CG8887-PA
            protein.
          Length = 2217

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -3

Query: 615  CICGMYKRTASLTQCAKLPG*MQSLSNFAGFSKALYRCTR 496
            CICG+YK    + QC+K      +    A      Y+C R
Sbjct: 1851 CICGLYKDEGLMIQCSKCMVWQHTECTKADIDADNYQCER 1890


>AE014134-1688|AAF52806.1|  196|Drosophila melanogaster CG4079-PA
           protein.
          Length = 196

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 301 FPAAAVVQRFDVHVGHFVLHNVTIQLCGGIKIFVG 197
           FP AAV +      G  V  NV I + G  K+FVG
Sbjct: 112 FPKAAVKRLMQTITGCSVSQNVVIAMSGIAKVFVG 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,605,231
Number of Sequences: 53049
Number of extensions: 644629
Number of successful extensions: 1452
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)