Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26o11
         (335 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-19|CAA22104.1|  696|Caenorhabditis elegans Hypothetical...    29   1.1  
AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical ...    29   1.1  
Z66520-9|CAA91390.2|  335|Caenorhabditis elegans Hypothetical pr...    27   2.5  
Z49867-1|CAA90027.1|  312|Caenorhabditis elegans Hypothetical pr...    27   2.5  
AF100659-8|AAC68966.1|  688|Caenorhabditis elegans Hypothetical ...    27   3.3  
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr...    27   4.4  
AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical ...    27   4.4  
U13875-8|AAN63443.1|  633|Caenorhabditis elegans Hypothetical pr...    26   5.8  
U13875-7|AAN63444.1|  635|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z70753-9|CAA94765.1|  502|Caenorhabditis elegans Hypothetical pr...    26   7.7  

>AL033514-19|CAA22104.1|  696|Caenorhabditis elegans Hypothetical
           protein Y75B8A.19 protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 29  VINMFLNDEIENDKIYKL 82
           V+ +FLNDE+ NDK+Y L
Sbjct: 206 VVEIFLNDELLNDKLYIL 223


>AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical
           protein C30F12.3 protein.
          Length = 264

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 41  FLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVT 169
           F  D+  N+KIYK V TV     L+R ++     AL +  S T
Sbjct: 207 FFRDKRNNEKIYKEVVTVKKIQLLTRMRISLSAEALGSESSHT 249


>Z66520-9|CAA91390.2|  335|Caenorhabditis elegans Hypothetical
           protein F49E12.5a protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -3

Query: 330 FLYIAQIYFHFYLSYY*YAGN-WYASSSFVTRKFAKKLSSSCVKTLSSTNLC 178
           +L +    F   L YY Y    W  S SFV R F  ++S  C + +   ++C
Sbjct: 200 YLAVFNFVFDIGLMYYSYQEILWKRSYSFVNR-FQSRISLKCTQAIFIISIC 250


>Z49867-1|CAA90027.1|  312|Caenorhabditis elegans Hypothetical
           protein C33D3.3 protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 83  LVCRFCHFQFHRLKT 39
           LVCR CH  FH  KT
Sbjct: 162 LVCRNCHLYFHHYKT 176


>AF100659-8|AAC68966.1|  688|Caenorhabditis elegans Hypothetical
           protein F58E2.3 protein.
          Length = 688

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 13/22 (59%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
 Frame = -3

Query: 186 NLCNV-NVTLTLFNNACIKKST 124
           NL NV NV++++F+NA IKK+T
Sbjct: 370 NLINVENVSVSIFDNAGIKKAT 391


>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
           protein T20G5.5 protein.
          Length = 1234

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +2

Query: 2   KDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNN--VSVTFT 175
           +D + +  RV N  +  E+ +  +   V T  + + LSR Q+  +   LLNN  +S    
Sbjct: 437 RDITTEHTRVQNCMIGAEMIDWLLTLFVSTSTTCSSLSRIQMSAIWQVLLNNGLISHIDG 496

Query: 176 LHRFVD 193
            H+F+D
Sbjct: 497 EHQFLD 502


>AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical
           protein B0212.1 protein.
          Length = 649

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -3

Query: 330 FLYIAQIYFHFYLSYY*YAG-NWYASSSFVTRKFAKKLSSSCVKTLSSTNLCNVNVTLTL 154
           ++Y   + F FY+         WY++  ++ +K    L     K  S+ +   +N+ +  
Sbjct: 97  YMYGGSLLFFFYMYIVLLLNPRWYSTMEYLKKKNRGTLEKCSPKKCSTNSRQKINIRIPK 156

Query: 153 FNN 145
            NN
Sbjct: 157 INN 159


>U13875-8|AAN63443.1|  633|Caenorhabditis elegans Hypothetical
           protein C26E6.7a protein.
          Length = 633

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +2

Query: 104 NKLSRRQVDFLIHA--LLNNVSVTFTLHRFVDDNVLTQDELSFLANFLVTKLDEAYQ 268
           N+ S+R  +FLI    L+NN+        FV+++ + + E S  A    T L+E++Q
Sbjct: 429 NRYSKRLDEFLICTVFLVNNLPKKILAQDFVEESRVLKPEGSSSAVSSTTVLEESHQ 485


>U13875-7|AAN63444.1|  635|Caenorhabditis elegans Hypothetical
           protein C26E6.7b protein.
          Length = 635

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +2

Query: 104 NKLSRRQVDFLIHA--LLNNVSVTFTLHRFVDDNVLTQDELSFLANFLVTKLDEAYQ 268
           N+ S+R  +FLI    L+NN+        FV+++ + + E S  A    T L+E++Q
Sbjct: 431 NRYSKRLDEFLICTVFLVNNLPKKILAQDFVEESRVLKPEGSSSAVSSTTVLEESHQ 487


>Z70753-9|CAA94765.1|  502|Caenorhabditis elegans Hypothetical
           protein F40F9.10 protein.
          Length = 502

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -3

Query: 240 RKFAKKLSSSCVKTLSSTNLCNVNVTLTLFN 148
           R+FAK  + SC + L++ +L ++  ++T+ N
Sbjct: 431 REFAKDCADSCTRFLNNIHLSDLMYSVTVVN 461


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,454,096
Number of Sequences: 27780
Number of extensions: 108484
Number of successful extensions: 369
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)