Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26o04
         (352 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069538-1|AAL39683.1|  562|Drosophila melanogaster LD26135p pro...    29   2.2  
AE014298-875|AAF46151.1|  562|Drosophila melanogaster CG12219-PA...    29   2.2  
AY051428-1|AAK92852.1|  405|Drosophila melanogaster GH10454p pro...    28   2.9  
AE014297-3784|AAF56456.2|  405|Drosophila melanogaster CG10562-P...    28   2.9  
BT003482-1|AAO39485.1|  537|Drosophila melanogaster RE55639p pro...    27   8.9  
AY058298-1|AAL13527.1|  659|Drosophila melanogaster GH05975p pro...    27   8.9  
AE014298-978|AAF46222.2|  537|Drosophila melanogaster CG32732-PA...    27   8.9  
AE014134-1092|AAF52383.2|  659|Drosophila melanogaster CG9528-PA...    27   8.9  

>AY069538-1|AAL39683.1|  562|Drosophila melanogaster LD26135p
           protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 142 LARSPND*IIICKNTQTWKCKLRKKLNIWKLMTAKKSTLSRLFCAIPC 285
           L  S +D I  C  T+    +L    N WKL+  K++TL   F AI C
Sbjct: 54  LCLSRDDAISTCICTECCS-QLESFHNFWKLVELKQTTLCSQFLAIDC 100


>AE014298-875|AAF46151.1|  562|Drosophila melanogaster CG12219-PA
           protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 142 LARSPND*IIICKNTQTWKCKLRKKLNIWKLMTAKKSTLSRLFCAIPC 285
           L  S +D I  C  T+    +L    N WKL+  K++TL   F AI C
Sbjct: 54  LCLSRDDAISTCICTECCS-QLESFHNFWKLVELKQTTLCSQFLAIDC 100


>AY051428-1|AAK92852.1|  405|Drosophila melanogaster GH10454p
           protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +3

Query: 117 LSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDXVKTFLRNSMSTAE 296
           L D  L K G VAQ L Y+L     LE ++ +   Y++I     ++ +K  L+ S     
Sbjct: 273 LVDYQLPKYGTVAQDLLYFLLSSTKLEDKLAKFDYYIKIYHDNLVEHLK-ILKYSKPIPS 331

Query: 297 QRDLYALALK 326
            RD++    K
Sbjct: 332 LRDIHLALFK 341


>AE014297-3784|AAF56456.2|  405|Drosophila melanogaster CG10562-PA
           protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +3

Query: 117 LSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDXVKTFLRNSMSTAE 296
           L D  L K G VAQ L Y+L     LE ++ +   Y++I     ++ +K  L+ S     
Sbjct: 273 LVDYQLPKYGTVAQDLLYFLLSSTKLEDKLAKFDYYIKIYHDNLVEHLK-ILKYSKPIPS 331

Query: 297 QRDLYALALK 326
            RD++    K
Sbjct: 332 LRDIHLALFK 341


>BT003482-1|AAO39485.1|  537|Drosophila melanogaster RE55639p
           protein.
          Length = 537

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 189 NLEMQIEEEIKYMEIDDGEEID 254
           N EM   +E+K +E+ DG+EI+
Sbjct: 489 NKEMHEADEVKELELKDGQEIE 510


>AY058298-1|AAL13527.1|  659|Drosophila melanogaster GH05975p
           protein.
          Length = 659

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 27  RLTIYICNNFLIFTLKSARMIERTVTRWHLLSD 125
           RL ++IC   +    +SA  +E+ V  W LL D
Sbjct: 332 RLALHICEEGIQKINESAERLEKPVLNWSLLVD 364


>AE014298-978|AAF46222.2|  537|Drosophila melanogaster CG32732-PA
           protein.
          Length = 537

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 189 NLEMQIEEEIKYMEIDDGEEID 254
           N EM   +E+K +E+ DG+EI+
Sbjct: 489 NKEMHEADEVKELELKDGQEIE 510


>AE014134-1092|AAF52383.2|  659|Drosophila melanogaster CG9528-PA
           protein.
          Length = 659

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 27  RLTIYICNNFLIFTLKSARMIERTVTRWHLLSD 125
           RL ++IC   +    +SA  +E+ V  W LL D
Sbjct: 332 RLALHICEEGIQKINESAERLEKPVLNWSLLVD 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,188,069
Number of Sequences: 53049
Number of extensions: 227759
Number of successful extensions: 635
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)