Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26o04
(352 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 0.71
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 0.71
AF000194-4|AAK39378.2| 390|Caenorhabditis elegans Suspended ani... 27 2.9
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 27 3.8
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 27 3.8
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical pr... 26 8.7
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 26 8.7
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 26 8.7
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 26 8.7
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 26 8.7
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 26 8.7
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 26 8.7
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 26 8.7
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 26 8.7
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 26 8.7
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 26 8.7
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.5 bits (63), Expect = 0.71
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +3
Query: 18 KXXRLTIYICNNFLIFTLKSARMIERTVTRWHLL--SDNVLLKIGEVAQRLNYYLQEYAN 191
K L IY N FL S ++ + H L D+V L +G A Y Q +
Sbjct: 412 KEYGLKIYGLNQFL----SSDSLLGSNLYTGHCLLNGDDVKLDLGVFAPNSRIYEQTLES 467
Query: 192 LEMQIEEEIKYMEIDDGEEIDXVKTFLRNSMSTAEQRDLYALALKLNS 335
+ ++ ++KY + D E+++ L + MS E LKL+S
Sbjct: 468 WNL-MKSQVKYSTVVDKEDVENTLGHLASEMSQYEIAFNDGSTLKLSS 514
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.5 bits (63), Expect = 0.71
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +3
Query: 18 KXXRLTIYICNNFLIFTLKSARMIERTVTRWHLL--SDNVLLKIGEVAQRLNYYLQEYAN 191
K L IY N FL S ++ + H L D+V L +G A Y Q +
Sbjct: 412 KEYGLKIYGLNQFL----SSDSLLGSNLYTGHCLLNGDDVKLDLGVFAPNSRIYEQTLES 467
Query: 192 LEMQIEEEIKYMEIDDGEEIDXVKTFLRNSMSTAEQRDLYALALKLNS 335
+ ++ ++KY + D E+++ L + MS E LKL+S
Sbjct: 468 WNL-MKSQVKYSTVVDKEDVENTLGHLASEMSQYEIAFNDGSTLKLSS 514
>AF000194-4|AAK39378.2| 390|Caenorhabditis elegans Suspended
animation (anoxia-induced)defective protein 1 protein.
Length = 390
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 327 ILMLTRTNHAVPPWTWNCAKKS*QXRFLRRH 235
+L+L RTN AVP N A+ + + R +RRH
Sbjct: 176 VLILARTNCAVPIQIVNDAEDALEMREMRRH 206
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 169 IICKNTQTWKCKLRKKLNIWKLMTAKKSTLSRL 267
+ C +T W +KKLN WKL K S+L
Sbjct: 8 VTCLDTGFWNEVNKKKLNDWKLDETPKCISSQL 40
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 169 IICKNTQTWKCKLRKKLNIWKLMTAKKSTLSRL 267
+ C +T W +KKLN WKL K S+L
Sbjct: 8 VTCLDTGFWNEVNKKKLNDWKLDETPKCISSQL 40
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/93 (21%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = +3
Query: 69 LKSARMIERTVTRWHLLSDNVLLKIGEVAQ-RLNYYLQEYANLEMQIEEEIKYMEID--D 239
L +++ + R+V + + LL++ + + ++ + +L+ EEIK +++D +
Sbjct: 791 LSASQEVSRSVVDAAVQEKDGLLRLVDTLKLKIEDTEKSAQDLQQSSVEEIKQLQLDLQN 850
Query: 240 GEEIDXVKTFLRNSMSTAEQRDLYALALKLNSL 338
++ V L ++++ +RD+ ALA +L L
Sbjct: 851 FKQNAEVLESLNEKLNSSHKRDMVALASQLEEL 883
>Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical
protein T12D8.3 protein.
Length = 274
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 195 EMQIEEEIKYMEIDDGEEIDXVKTFLRNSMSTAEQRDLY 311
+++ E E K+ +ID ++T LRN E +D Y
Sbjct: 150 KLETETEKKWFAAMRVSDIDTMRTLLRNEPEIIEAKDQY 188
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +3
Query: 156 QRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDXVKTFLRNSMSTAEQRDLY 311
+R+ ++E E ++ E+++ + + E+ + K ++ MST EQ+DLY
Sbjct: 474 ERMKNAVREANRREFEMLEKLENSKKSEEEKEELAK---KDQMSTEEQKDLY 522
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDXVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1857 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1885
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDXVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1827 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1855
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDXVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1883 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1911
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDXVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1837 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1865
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDXVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1837 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1865
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDXVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1857 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1885
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDXVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1837 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1865
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDXVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1827 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1855
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 240 GEEIDXVKTFLRNSMSTAEQRDLYALALKLN 332
GE I+ VK + + +++RDLYA+ KLN
Sbjct: 1883 GEVIEAVKE--KKEETWSQERDLYAIQCKLN 1911
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,065,958
Number of Sequences: 27780
Number of extensions: 125846
Number of successful extensions: 474
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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