Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26n12
(400 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 53 7e-08
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 50 5e-07
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 50 5e-07
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 50 5e-07
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 50 5e-07
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 50 5e-07
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 50 5e-07
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 47 6e-06
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 46 8e-06
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 46 1e-05
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 46 1e-05
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 46 1e-05
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 46 1e-05
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 45 2e-05
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 45 2e-05
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 44 3e-05
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 44 5e-05
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 44 5e-05
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 44 5e-05
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 44 5e-05
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 44 5e-05
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 42 2e-04
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 41 4e-04
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 41 4e-04
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 41 4e-04
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 41 4e-04
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 40 5e-04
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 40 5e-04
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 40 5e-04
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 40 7e-04
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 40 9e-04
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 40 9e-04
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 39 0.002
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 39 0.002
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 38 0.002
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 38 0.003
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 38 0.003
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 38 0.003
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 38 0.003
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 38 0.003
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 38 0.003
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 38 0.004
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 38 0.004
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 38 0.004
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 37 0.005
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 37 0.006
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 37 0.006
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 37 0.006
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 37 0.006
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 36 0.008
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 36 0.008
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 36 0.008
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 36 0.008
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 36 0.011
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 36 0.011
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 36 0.011
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 36 0.011
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 36 0.014
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 36 0.014
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 36 0.014
Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical pr... 35 0.019
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 35 0.019
U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic acety... 35 0.019
U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic acety... 35 0.019
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 34 0.033
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 34 0.033
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 33 0.057
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 33 0.057
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 33 0.075
U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine r... 33 0.075
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 33 0.075
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 33 0.100
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 32 0.13
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 32 0.13
AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 32 0.13
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 32 0.13
AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 32 0.13
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 32 0.17
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 30 0.53
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 30 0.53
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 29 0.93
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 29 1.6
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 53.2 bits (122), Expect = 7e-08
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Frame = +1
Query: 7 MSTTYIILLPFLLTCAIASAAECENAT-SLSLMIDSLLATYDRESPPDSKIVVNLTLHLR 183
M +++ + F+ T + A E S S + LL +++ SPPD ++ ++ + L
Sbjct: 41 MQCSFLTIFIFITTVTVGVAEFSEQYQGSSSRLTRHLLEKHNKCSPPDGRVDISHNIELV 100
Query: 184 HA-NIRESESTVRILADLXMNWIDXRLSWNAGEW-GCS-TWLVSSERLWRPDVVLLN 345
H I E +++L + W D LSW E+ G TWL +W PD+++ N
Sbjct: 101 HIIGINELNQNMQVLVYIVQQWTDASLSWKVEEFRGIKHTWL-PEHSIWIPDIIVFN 156
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 100 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLSWNAG 276
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 277 EWG--CSTWLVSSERLWRPDVVLLN 345
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 100 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLSWNAG 276
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 277 EWG--CSTWLVSSERLWRPDVVLLN 345
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 100 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLSWNAG 276
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 277 EWG--CSTWLVSSERLWRPDVVLLN 345
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 100 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLSWNAG 276
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 277 EWG--CSTWLVSSERLWRPDVVLLN 345
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 100 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLSWNAG 276
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 277 EWG--CSTWLVSSERLWRPDVVLLN 345
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.4 bits (115), Expect = 5e-07
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 100 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLSWNAG 276
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 277 EWG--CSTWLVSSERLWRPDVVLLN 345
+G TW + +++W PD+++ N
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFN 153
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 46.8 bits (106), Expect = 6e-06
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Frame = +1
Query: 37 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRE 201
FLL I +S ++++LL Y++ P + V +L R ++ E
Sbjct: 11 FLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDE 70
Query: 202 SESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 345
+ L M W D +L+WN +WG ++ + S+++W PD+VL N
Sbjct: 71 VNQVLTTSLWLEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYN 119
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 46.4 bits (105), Expect = 8e-06
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 124 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL- 300
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 301 VSSERLWRPDV 333
+ +++W P +
Sbjct: 123 MKQDKVWSPTI 133
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 46.0 bits (104), Expect = 1e-05
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 190 NIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 345
++ E + + + L +W+D RLSWN E+G T + E LW PD++L N
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYN 96
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 45.6 bits (103), Expect = 1e-05
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Frame = +1
Query: 16 TYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLR 183
++ + L LL C I+ E + D L+ Y+R + P+ + + L L L
Sbjct: 3 SFWLFLLLLLFC-ISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLS 61
Query: 184 HA-NIRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 345
++ E + + L WID +LSW+ + G + V E +W PD+VL N
Sbjct: 62 QIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYN 117
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 45.6 bits (103), Expect = 1e-05
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Frame = +1
Query: 16 TYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLR 183
++ + L LL C I+ E + D L+ Y+R + P+ + + L L L
Sbjct: 3 SFWLFLLLLLFC-ISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLS 61
Query: 184 HA-NIRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 345
++ E + + L WID +LSW+ + G + V E +W PD+VL N
Sbjct: 62 QIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYN 117
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 45.6 bits (103), Expect = 1e-05
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Frame = +1
Query: 16 TYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLR 183
++ + L LL C I+ E + D L+ Y+R + P+ + + L L L
Sbjct: 3 SFWLFLLLLLFC-ISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLS 61
Query: 184 HA-NIRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 345
++ E + + L WID +LSW+ + G + V E +W PD+VL N
Sbjct: 62 QIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYN 117
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 45.2 bits (102), Expect = 2e-05
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 190 NIRESESTVRILADLXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 345
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL N
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFN 151
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 45.2 bits (102), Expect = 2e-05
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 190 NIRESESTVRILADLXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 345
N+ E ++ L M W D +L+WN E+G S V S+R+W PD+VL N
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFN 151
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 44.4 bits (100), Expect = 3e-05
Identities = 20/95 (21%), Positives = 42/95 (44%)
Frame = +1
Query: 61 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLXM 240
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 241 NWIDXRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 345
+W D +SW+ +WG S ++W P++V +N
Sbjct: 114 SWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQIN 148
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 43.6 bits (98), Expect = 5e-05
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Frame = +1
Query: 40 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 204
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 205 ESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 345
V + A L W D L W+ E+G T + + ++W+PDV+L N
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYN 113
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 43.6 bits (98), Expect = 5e-05
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 232 LXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 345
L +NW+D RLSWN W + R+W+PD++L+N
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVN 203
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 43.6 bits (98), Expect = 5e-05
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Frame = +1
Query: 40 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 204
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 205 ESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 345
V + A L W D L W+ E+G T + + ++W+PDV+L N
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYN 113
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 43.6 bits (98), Expect = 5e-05
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Frame = +1
Query: 40 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 204
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 205 ESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 345
V + A L W D L W+ E+G T + + ++W+PDV+L N
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYN 113
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 43.6 bits (98), Expect = 5e-05
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Frame = +1
Query: 40 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-----NIRES 204
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 205 ESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 345
V + A L W D L W+ E+G T + + ++W+PDV+L N
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYN 113
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +1
Query: 103 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLXMNWIDXRL 261
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 262 SWNAGEWGCSTWLVS-SERLWRP 327
SWNA ++ T + + E++W P
Sbjct: 110 SWNASDYKNVTAIFTRQEKIWSP 132
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 41.5 bits (93), Expect = 2e-04
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +1
Query: 25 ILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSK--IVVNLTLHLRHA- 189
+LLP LL + + + + +I+ L++ Y RE P DS +VV+L + L+
Sbjct: 1 MLLPILLHFLLL-ITQLNGSPAEVRLINDLMSGYVREERPTLDSSKPVVVSLGVFLQQII 59
Query: 190 NIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 345
N+ E E + + A L W D L W + T L + LW PD++L N
Sbjct: 60 NLSEKEEQLEVNAWLKFQWRDENLRWEPTAYENVTDLRHPPDALWTPDILLYN 112
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 40.7 bits (91), Expect = 4e-04
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 133 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSS 309
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 310 ERLWRPDVVLLN 345
E++W PD+VL N
Sbjct: 118 EKVWLPDIVLFN 129
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 40.7 bits (91), Expect = 4e-04
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 133 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSS 309
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 310 ERLWRPDVVLLN 345
E++W PD+VL N
Sbjct: 118 EKVWLPDIVLFN 129
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 40.7 bits (91), Expect = 4e-04
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 133 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSS 309
E P KI + L L + N+ E E + L M W D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 310 ERLWRPDVVLLN 345
E++W PD+VL N
Sbjct: 118 EKVWLPDIVLFN 129
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 40.7 bits (91), Expect = 4e-04
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Frame = +1
Query: 7 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRE-SPPDSKIVVNLTLH-L 180
M + ++LL + + + A E + + +L+ TYD + P D +V +T +
Sbjct: 1 MLISCLLLLMLWILRFLTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTF 60
Query: 181 RHANIRESESTVRILADLXMNWIDXRLSWNAGEWGC-STWL-VSSERLWRPDVVLLN 345
++ +++ T++ + + W D L WN + W+ +S+ R W PDV+ N
Sbjct: 61 ILLSMDQTQETIQYSEEFLLRWYDPILHWNQSAVSYENDWIKISASRAWIPDVIFTN 117
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 40.3 bits (90), Expect = 5e-04
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +1
Query: 37 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRE 201
F L + + E + T + D L+ YD P + +++N++++ +
Sbjct: 10 FYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDP 69
Query: 202 SESTVRILADLXMNWIDXRLSWNAGEWGCSTWLVSSER-LWRPDVVL 339
+E T+ ++ + W D L WN ++ TWL E LW PD +
Sbjct: 70 AEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTV 115
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 166 LTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWLVSSERLWRP 327
L +L+ ++E E V ++ +L W D RLSWN+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 40.3 bits (90), Expect = 5e-04
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 232 LXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 345
L M W D RL W+ G WG L V +++W PD++L N
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYN 115
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 40.3 bits (90), Expect = 5e-04
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +1
Query: 100 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLS 264
+ + L+A Y++ P S+ +VV L L ++ E + L +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 265 WNAGEWG-CSTWLVSSERLWRPDVVLLN 345
W+ E+G V S+ +W PDVVL N
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYN 117
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 40.3 bits (90), Expect = 5e-04
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +1
Query: 100 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLS 264
+ + L+A Y++ P S+ +VV L L ++ E + L +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 265 WNAGEWG-CSTWLVSSERLWRPDVVLLN 345
W+ E+G V S+ +W PDVVL N
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYN 117
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 39.9 bits (89), Expect = 7e-04
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 139 PPDSKIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWLVSSER 315
PP +++ + + + L+ ++ E E V L D W D RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 316 LWRPDVVL 339
+W P+V +
Sbjct: 110 IWLPEVTI 117
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 39.5 bits (88), Expect = 9e-04
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 160 VNLTLHLRHAN-IRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWLVSSERLWRPDVV 336
VN+ L + H + E E T + + WID + W+A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 337 LLN 345
L N
Sbjct: 114 LYN 116
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 39.5 bits (88), Expect = 9e-04
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Frame = +1
Query: 28 LLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-N 192
L+ +L+ I + C+ + + + + LL Y+ P + V + L L+ +
Sbjct: 5 LINSILSLVIIHSNLCDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQQILD 64
Query: 193 IRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWLV---SSERLWRPDVVLLN 345
+ E V + A L W D +L W ++G + SS+ +W+PDV+L N
Sbjct: 65 VDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYN 118
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +1
Query: 64 AAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA-NIRESESTVRI 222
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 223 LADLXMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 345
+ W D RLSW+ ++ G +V +W P + + N
Sbjct: 117 VISHTQRWYDGRLSWDPSKYRGQREVIVPQTMVWIPKLFVYN 158
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +1
Query: 112 LLATYDRESPPD--SKIVVNLTLHLRHANIRESESTVRILAD---LXMNWIDXRLSWNAG 276
LL Y+ E P SK +N+T I + + +IL + ++W+D +L W+
Sbjct: 7 LLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPR 66
Query: 277 EWGCSTWL-VSSERLWRPDVVLLN 345
+ T + + S+++W+PD++L N
Sbjct: 67 LYQNVTRIHIPSDKIWKPDIILYN 90
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 139 PPDSKIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSER 315
PP +I + L++ ++ + E E L D +W D RLSW+ ++G + V +
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHIYVPRSK 137
Query: 316 LWRPDVVLLN 345
+W P+ +++
Sbjct: 138 VWIPETTIVD 147
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 154 IVVNLTLHL-RHANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRP 327
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 328 DVVLLN 345
D+VL N
Sbjct: 116 DIVLFN 121
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 154 IVVNLTLHL-RHANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRP 327
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 328 DVVLLN 345
D+VL N
Sbjct: 116 DIVLFN 121
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 37.9 bits (84), Expect = 0.003
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Frame = +1
Query: 22 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRHAN 192
I++L FL+ A+A + +I L Y +E P +S N+T+ L
Sbjct: 10 IVVLHFLMGLAMAQQKQ---------LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQ 60
Query: 193 IR---ESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 345
I+ E++ + + + W D L+WN ++G L V SE +W+PD+++ N
Sbjct: 61 IQKVHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYN 115
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 37.9 bits (84), Expect = 0.003
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Frame = +1
Query: 22 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRHAN 192
I++L FL+ A+A + +I L Y +E P +S N+T+ L
Sbjct: 10 IVVLHFLMGLAMAQQKQ---------LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQ 60
Query: 193 IR---ESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 345
I+ E++ + + + W D L+WN ++G L V SE +W+PD+++ N
Sbjct: 61 IQKVHENDQIITLYCWIEEYWQDEFLTWNPSDFGNIKSLHVPSEMIWKPDLLVYN 115
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 154 IVVNLTLHL-RHANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRP 327
++V + L L N+ E + + L + W D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 328 DVVLLN 345
D+VL N
Sbjct: 116 DIVLFN 121
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 160 VNLTLHLRHAN-IRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWLVSSERLWRPDVV 336
V + L++ H + E E T + L +W D L W ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 337 LLN 345
L N
Sbjct: 114 LYN 116
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 193 IRESESTVRILADLXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 345
+ E + V I L + WID L+W+ ++G S V + ++W+PDV++ N
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYN 120
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 166 LTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWLVSSERLWRP 327
L +L+ ++E V ++ +L W D RLSWN + ST E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 193 IRESESTVRILADLXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 345
+ E + V I L + WID L+W+ ++G S V + ++W+PDV++ N
Sbjct: 69 VDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVYN 120
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 37.5 bits (83), Expect = 0.004
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Frame = +1
Query: 100 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLXMNWIDXRL 261
+I L Y +E P +S N+T+ L I+ E++ + + + W D L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 262 SWNAGEWGCSTWL-VSSERLWRPDVVLLN 345
+WN ++G L V SE +W+PD+++ N
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLVYN 99
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 37.1 bits (82), Expect = 0.005
Identities = 17/68 (25%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +1
Query: 154 IVVNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL---VSSERLW 321
+VV++ ++L+ ++ E + ++A + W D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 322 RPDVVLLN 345
+PDV+L N
Sbjct: 113 KPDVLLYN 120
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 36.7 bits (81), Expect = 0.006
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 106 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEW- 282
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 283 GCSTWLVSSERLWRPDVVLLN 345
G T V +++W PD+VL N
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFN 117
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 36.7 bits (81), Expect = 0.006
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 106 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEW- 282
+SL+ S P ++ +L L N+ E ++ M W D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 283 GCSTWLVSSERLWRPDVVLLN 345
G T V +++W PD+VL N
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFN 117
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 36.7 bits (81), Expect = 0.006
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +1
Query: 100 MIDSLLATYDRESPP--DSKIVVNLTLHL---RHANIRESESTVRILADLXMNWIDXRLS 264
++ L YD P D + VN+ L L + ++ E + ++ W D +L
Sbjct: 28 LLKDLREGYDPVERPVADHRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLR 87
Query: 265 WNAGEWGCSTWL-VSSERLWRPDVVLLN 345
W+ E+G T L + LW+PD++L N
Sbjct: 88 WSPEEYGNITTLQIPHGTLWKPDILLFN 115
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 36.7 bits (81), Expect = 0.006
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 154 IVVNLTLHLRH-ANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRP 327
++V + L L+ ++ E V + A L +W+D L W ++G T L +LW P
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTP 110
Query: 328 DVVLLN 345
DV++ N
Sbjct: 111 DVLMYN 116
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 36.3 bits (80), Expect = 0.008
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Frame = +1
Query: 70 ECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLH-LRHANIRESESTVRILADL 234
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 235 XMNWIDXRLSWNAGEWGCSTWLVSSER-LWRPDVVL 339
+ W D L WN ++ TWL E LW PD +
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTV 115
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 36.3 bits (80), Expect = 0.008
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Frame = +1
Query: 46 TCAIASAAECE-NATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVR 219
T ++ A CE N+ ++ LL YD+ P + V +++ L +I SE +
Sbjct: 20 TESLVDPAHCEYNSNHRKSILTDLLQDYDKTMVPSNNSV-QVSVELTVQDISSISEISSS 78
Query: 220 ILADLXMN--WIDXRLSWNAGEWGCSTWLVS--SERLWRPDVVLLN 345
+AD+ + W D RL + + L S SERLW P+V +N
Sbjct: 79 FIADVWFSQVWYDPRLEYRNISCKTNLSLDSYVSERLWTPNVCFVN 124
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 36.3 bits (80), Expect = 0.008
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 157 VVNLTLHLRHAN---IRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWLVSSERLWR 324
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 325 PDVVLLN 345
PD + N
Sbjct: 120 PDGYIFN 126
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 36.3 bits (80), Expect = 0.008
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 157 VVNLTLHLRHAN---IRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWLVSSERLWR 324
V+N+T+ + N + E ++IL +W D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 325 PDVVLLN 345
PD + N
Sbjct: 120 PDGYIFN 126
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 157 VVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDV 333
+V++ H+ H +I + E T+ + + M W D L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 334 VLLN 345
+ N
Sbjct: 134 KVSN 137
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 157 VVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL-VSSERLWRPDV 333
+V++ H+ H +I + E T+ + + M W D L W+ ++ + V ++W+P +
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARVKKWQVWQPKI 133
Query: 334 VLLN 345
+ N
Sbjct: 134 KVSN 137
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 35.9 bits (79), Expect = 0.011
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 232 LXMNWIDXRLSWNAGEWGCSTW-LVSSERLWRPDV 333
L ++W D RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 35.9 bits (79), Expect = 0.011
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 232 LXMNWIDXRLSWNAGEWGCSTW-LVSSERLWRPDV 333
L ++W D RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 35.5 bits (78), Expect = 0.014
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 178 LRHANIRESESTVRILADLXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 345
+R ++ E + L M W D +L+W ++G T + S+ +W PD+VL N
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYN 128
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 35.5 bits (78), Expect = 0.014
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 178 LRHANIRESESTVRILADLXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 345
+R ++ E + L M W D +L+W ++G T + S+ +W PD+VL N
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYN 128
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 35.5 bits (78), Expect = 0.014
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = +1
Query: 28 LLPFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSKIVVNLTLH-LRHANIRE 201
LL FL+ S + + L+ + TYD P D+ V +T + ++ +
Sbjct: 8 LLTFLVLRTFGSNTTNVESNTEVLLQELFNRTYDVNVKPSDTLTTVTITPNTFLLLSMDQ 67
Query: 202 SESTVRILADLXMNWIDXRLSWNAGEWGCS-TWL-VSSERLWRPDVV 336
++ T+ + + W D L WN + + W+ +S R+W PDV+
Sbjct: 68 TQETILFSQEFLLKWYDPILHWNRTLFDYNREWIKISVSRVWVPDVI 114
>Z74039-9|CAA98507.1| 564|Caenorhabditis elegans Hypothetical
protein K03B8.9 protein.
Length = 564
Score = 35.1 bits (77), Expect = 0.019
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 151 KIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRP 327
K+ ++++L+ + + E +++ + W D L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 328 DVVLLN 345
D L N
Sbjct: 138 DTYLYN 143
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 35.1 bits (77), Expect = 0.019
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Frame = +1
Query: 7 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRH 186
MS + ILL F + S E L DS + S P + V L+ +
Sbjct: 1 MSFVFFILLTFYIQVK-GSVDEYRLLQYLKENYDSFERPVENSSAP-LDVKVRFLLN-QI 57
Query: 187 ANIRESESTVRILADLXMNWIDXRLSWNAGEWG------CSTWLVSSERLWRPDVVLLN 345
++ E + ILA + +W D +L+W+ +G S +S +LWRPDV+L N
Sbjct: 58 MDVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFN 116
>U19747-1|AAA92689.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit precursor protein.
Length = 564
Score = 35.1 bits (77), Expect = 0.019
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 151 KIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRP 327
K+ ++++L+ + + E +++ + W D L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 328 DVVLLN 345
D L N
Sbjct: 138 DTYLYN 143
>U19746-1|AAA92688.1| 564|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 564
Score = 35.1 bits (77), Expect = 0.019
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 151 KIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRP 327
K+ ++++L+ + + E +++ + W D L WN E+G ++ ++ LW P
Sbjct: 79 KVHISISLY-QIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPNEYGMINSTIIPFHHLWIP 137
Query: 328 DVVLLN 345
D L N
Sbjct: 138 DTYLYN 143
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 34.3 bits (75), Expect = 0.033
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 124 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWL 300
YD ++P + L L+ + E V ++ ++ W D RLSWNA + T+
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFY 122
Query: 301 VSSERLWRP 327
+W P
Sbjct: 123 TRQSNVWSP 131
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 34.3 bits (75), Expect = 0.033
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 172 LHLRHAN-IRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWLVSSERLWR 324
LH+ H + I++ + +++ W+D RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 33.5 bits (73), Expect = 0.057
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +1
Query: 76 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLXMNWI 249
E+A L+ L I +A+ + +N L+H + E + I L ++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 250 DXRLSWNAGEWGCSTWLVSS-ERLWRP 327
D RL WN W + +V S +W P
Sbjct: 93 DDRLMWNQDTWKKNKLVVHSFHHIWVP 119
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 33.5 bits (73), Expect = 0.057
Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +1
Query: 100 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLXMNWIDXRLS 264
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 265 WNAGEWGCSTWLVSSERL-WRPDVVLLN 345
WN + T +V L W P + + N
Sbjct: 104 WNPADHSGLTQVVMPRSLVWVPKLFIYN 131
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 33.1 bits (72), Expect = 0.075
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 232 LXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 345
L M+W D L+W+ E+G + +W+PDV+L N
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYN 115
>U00053-1|AAZ94293.1| 548|Caenorhabditis elegans Acetylcholine
receptor protein 5 protein.
Length = 548
Score = 33.1 bits (72), Expect = 0.075
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 160 VNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRPDV 333
VNL++ L ++ E ++ + + +W D L WN ++G + +V ++W PD
Sbjct: 133 VNLSMSLYQILDVDEHMQSIEVNVWMVQHWYDEFLDWNPVDYGMINRTIVPYHQIWIPDT 192
Query: 334 VLLN 345
L N
Sbjct: 193 YLYN 196
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 33.1 bits (72), Expect = 0.075
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 232 LXMNWIDXRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 345
L M+W D L+W+ E+G + +W+PDV+L N
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYN 115
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.100
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 124 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWL- 300
Y+ +P V+L +L+ + E E V ++ ++ W D R++W++ +G L
Sbjct: 64 YNPLAPKRFNYTVSL-YYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYGDIKMLH 122
Query: 301 VSSERLWRPDVVL 339
+ +++W P + L
Sbjct: 123 MRQDKVWSPTLSL 135
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 32.3 bits (70), Expect = 0.13
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 142 PDSKIVVNLTLHLRHANIRESE-STVRILADLXMNWIDXRLSWNAGEWG--CSTWLVSSE 312
P + V + + ++ + +++ + + A L W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 313 RLWRPDVVLLN 345
++W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 32.3 bits (70), Expect = 0.13
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Frame = +1
Query: 70 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLXMN- 243
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 244 -WIDXRLSWNAGEWGCSTWL---VSS--ERLWRPDVVLLN 345
W D RLS+ C+T + VS +++W PD ++N
Sbjct: 68 IWQDPRLSFKHLN-VCATNITLKVSDFRKKIWTPDTCIIN 106
>AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine
receptor (62.5 kD)(acr-23) protein.
Length = 545
Score = 32.3 bits (70), Expect = 0.13
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 148 SKIVVNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWLVS-SERLW 321
S I V L+L L + E + + + A W+D L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 322 RPDVVLLN 345
PD L N
Sbjct: 110 LPDTTLYN 117
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 32.3 bits (70), Expect = 0.13
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 142 PDSKIVVNLTLHLRHANIRESE-STVRILADLXMNWIDXRLSWNAGEWG--CSTWLVSSE 312
P + V + + ++ + +++ + + A L W D RL WN ++ S +
Sbjct: 52 PKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGED 111
Query: 313 RLWRPDVVLLN 345
++W+PD++L N
Sbjct: 112 QIWQPDILLYN 122
>AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine
receptor protein 23 protein.
Length = 545
Score = 32.3 bits (70), Expect = 0.13
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 148 SKIVVNLTLHLRHA-NIRESESTVRILADLXMNWIDXRLSWNAGEWGCSTWLVS-SERLW 321
S I V L+L L + E + + + A W+D L W+ E+ T +++ + +W
Sbjct: 50 SPINVTLSLQLYQIIQVNEPQQYLLLNAWAVERWVDQMLGWDPSEFDNETEIMARHDDIW 109
Query: 322 RPDVVLLN 345
PD L N
Sbjct: 110 LPDTTLYN 117
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.17
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +1
Query: 193 IRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 345
+ E +++L +W D L W+ EW G + +W PD + N
Sbjct: 68 VNEQNEQIKLLIWFPQSWKDDYLVWDPDEWDGIEKITIPKSMVWLPDGYIFN 119
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 30.3 bits (65), Expect = 0.53
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 193 IRESESTVRILADLXMNWIDXRLSWN-AGEWGC--STWLVSSERLWRPDVV 336
++ S + D+ +NW D R+ W+ GE+ ++ +S +W P V+
Sbjct: 83 VKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLYIFNSSAIWTPHVI 133
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 30.3 bits (65), Expect = 0.53
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 214 VRILADLXMNWIDXRLSWNAGEWGCST---WLVSSERLWRPDVVLLN 345
+ + A L W+D RL W+ ++ T + ++WRPD++L N
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYN 58
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 29.5 bits (63), Expect = 0.93
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 232 LXMNWIDXRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 345
L M W D RL+ N T + ++R+W PD+ +N
Sbjct: 175 LAMGWFDRRLAHNCTHPILVTSKLIADRIWYPDLYFVN 212
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 166 LTLHLRHANIRESESTVRILADLXMNWIDXRLSWNAGEW-GCSTWLVSSERLWRP 327
L L+ + E + V ++ ++ W D RL+WN ++ ++ +W P
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDYDDIASIYTRQANVWSP 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,935,736
Number of Sequences: 27780
Number of extensions: 175604
Number of successful extensions: 617
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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