BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26n06
(617 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 86 2e-19
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 81 8e-18
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 79 3e-17
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 70 2e-14
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 62 4e-12
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 59 3e-11
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 58 7e-11
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 55 5e-10
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 55 5e-10
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 55 5e-10
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 51 1e-08
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 47 1e-07
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 46 4e-07
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 43 3e-06
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 86.2 bits (204), Expect = 2e-19
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Frame = +1
Query: 265 FIQYNNVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYPNPE----- 429
FI NN+P G++ D +F+T+P+ + GIP TL + + HSK P L+PYPN E
Sbjct: 182 FITENNLPLGLEVWRDKVFITLPKWKDGIPVTLTTVPK-HSKTKSPKLRPYPNWEWHTVG 240
Query: 430 AVSSLTSVYRTAIDSCARLWMVDTGLLEVPGARRQVKPPAILAYNWLTHKLDFRYELDPE 609
LTSV+R +D C RLW++D+G +++ + PPAI ++ T L +Y + E
Sbjct: 241 NCDGLTSVFRIQVDECDRLWILDSGKVDIAKGGKLACPPAIFIFDLTTDTLIRKYIIPKE 300
Query: 610 GI 615
+
Sbjct: 301 QV 302
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 81.0 bits (191), Expect = 8e-18
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
Frame = +1
Query: 118 IGNGK-MKQLYAWKQLGYDFNGTKYIKDADRIRSPGAIHFVQELGDSEKFFIQYNNVPTG 294
+ NG+ +K +Y+W + Y+F D IR+ + GD +I+ NN+P G
Sbjct: 12 LANGEEIKTIYSWNVIEYNFPN-------DNIRNT-----LISNGD----YIEENNMPNG 55
Query: 295 IKFVGDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYPNPE-----AVSSLTSVYR 459
++ D +F+T+PR + G+PS LN+ ++ + P L PYPN E + S+ ++ R
Sbjct: 56 MQIWNDKVFITIPRWKNGVPSNLNFF-LKNDESESPKLNPYPNWEMNDINKIDSIINIIR 114
Query: 460 TAIDSCARLWMVDTGLLEVPGARRQVKPPAILAYNWLTHKL 582
+D+C RLW VDTG+ ++ G + P I+ + T K+
Sbjct: 115 VRVDACDRLWGVDTGVDDILGNNTVIHQPRIIIIDLKTDKI 155
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 79.0 bits (186), Expect = 3e-17
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Frame = +1
Query: 265 FIQYNNVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYPN------P 426
+I N +P GI+ + LF+TVPR R GIP+TL YI ++ P L PYPN
Sbjct: 62 YIPENALPVGIEIWRNKLFVTVPRWRNGIPATLTYISLDTNRGGSPKLTPYPNWAQNKAG 121
Query: 427 EAVSSLTSVYRTAIDSCARLWMVDTGLLEVPGARRQVKPPAILAYNWLTHKLDFRYELDP 606
S++T+ YR DSC RLW++DTG + + Q P + ++ + KL +Y L
Sbjct: 122 ACGSAITTAYRIHADSCDRLWVLDTGTIGIGNTTIQACPYTLNIFDLTSDKLLRQYRLRA 181
Query: 607 EGI 615
E I
Sbjct: 182 EDI 184
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 70.1 bits (164), Expect = 2e-14
Identities = 55/161 (34%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Frame = +1
Query: 130 KMKQLYAWKQLGYDF-NGTKYIKDADRIRSPGAIHFVQELGDSEKFFIQYNNVPTGIKFV 306
K+K +Y+WK L + F NG Y K A I+S I G S + N
Sbjct: 23 KLKNIYSWKALEFAFPNG--YAKLA-AIKSGSYIP-----GASLPIDVDVYNTEQ----- 69
Query: 307 GDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYPN-----PEAVSSLTSVYRTAID 471
+F+ +PR + G+P TL Y+ R S +PL+ PYPN + LTSVYR +D
Sbjct: 70 QSTVFVAIPRIQDGVPLTLGYVTREVSIDGNPLIAPYPNWSYNDVKYCDGLTSVYRMQVD 129
Query: 472 SCARLWMVDTGLLEVPGARRQVKPPAILAYNWLTHKLDFRY 594
C RLW++DTG+L +Q+ P I ++ +KL Y
Sbjct: 130 KCGRLWILDTGIL----GEKQICRPKIHVFSLHDNKLITMY 166
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 62.1 bits (144), Expect = 4e-12
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Frame = +1
Query: 61 INYVLLIFVLSNCVNC-NVYIGN--GKMKQLYAWKQLGYDFNGTKYIKDADRIRSPGAIH 231
I ++LL+++ C +++ N +K +Y WK + YDF + K I+S +
Sbjct: 2 IRWLLLMYLGITCQGVTDIHSRNLTNSLKVIYEWKYIDYDFGSDE--KRQAAIQSGDYNY 59
Query: 232 FVQELGDSEKFFIQYNNVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLK 411
+ L D++++ GD F+ + + G+PS+LN I + PLL
Sbjct: 60 TMNYLLDTDQW--------------GDKTFVIIMKFN-GVPSSLNVITNKTGNG-GPLLA 103
Query: 412 PYPN-----PEAVSSLTSVYRTAIDSCARLWMVDTGLLEVPGARRQVKPPAILAYNWLTH 576
PYP+ E S +TS Y+ ID C RLW++D+GL+ R V PP +L ++ T
Sbjct: 104 PYPDWTWAKNENCSGITSAYKIEIDMCDRLWVLDSGLI---NNVRSVCPPQLLVFDLNTS 160
Query: 577 KL 582
+L
Sbjct: 161 QL 162
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 59.3 bits (137), Expect = 3e-11
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Frame = +1
Query: 133 MKQLYAWKQLGYDFNGTKYIKDADRIRSPGAIHFVQELGDSEKFFIQYNNVPTGIKFVGD 312
MK +Y WK + +DF G+ +DA I+S G+ F N P + D
Sbjct: 37 MKVIYEWKHIDFDF-GSDERRDA-AIKS----------GE----FDHTKNYPFDVDRWRD 80
Query: 313 LLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYPN-----PEAVSSLTSVYRTAIDSC 477
F+T+ R G+PS+LN + + K PLL+PYP+ E S + S ++ A+D
Sbjct: 81 KTFVTIERNN-GVPSSLNVVTNKKGKG-GPLLRPYPDWSFAKYEDCSGIVSAFKIAVDKF 138
Query: 478 ARLWMVDTGLLEVPGARRQVKPPAILAYNWLTHKLDFRYEL 600
RLW++D+GL+ + + P +L ++ T KL + E+
Sbjct: 139 DRLWVLDSGLV---NNNQPMCSPKLLTFDLKTSKLVKQVEI 176
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 58.0 bits (134), Expect = 7e-11
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +1
Query: 277 NNVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYPN-----PEAVSS 441
NNVP + F+T+ R G+PS+LN I + PLL+PYPN + S
Sbjct: 64 NNVPIDVDRWNGKTFVTILRND-GVPSSLNVISNKIGNG-GPLLEPYPNWSWAKNQNCSG 121
Query: 442 LTSVYRTAIDSCARLWMVDTGLLEVPGARRQVKPPAILAYNWLTHKL 582
+TSVYR AID RLW++D G+ V P I+ ++ KL
Sbjct: 122 ITSVYRIAIDEWDRLWVLDNGI----SGETSVCPSQIVVFDLKNSKL 164
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 55.2 bits (127), Expect = 5e-10
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Frame = +1
Query: 277 NNVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYPN-----PEAVSS 441
NN P+ I D +F+T+ R G+PS+LN I ++ PLL+PYP+ + S
Sbjct: 63 NNYPSDIDQWHDKIFVTMLRYN-GVPSSLNVISKKVGDG-GPLLQPYPDWSFAKYDDCSG 120
Query: 442 LTSVYRTAIDSCARLWMVDTGLLEVPGARRQVKPPAILAYNWLTHKL 582
+ S + AID C RLW++D+GL+ + + P +L ++ T +L
Sbjct: 121 IVSASKLAIDKCDRLWVLDSGLV---NNTQPMCSPKLLTFDLTTSQL 164
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 55.2 bits (127), Expect = 5e-10
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Frame = +1
Query: 277 NNVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYPN-----PEAVSS 441
NN P+ I D +F+T+ R G+PS+LN I ++ PLL+PYP+ + S
Sbjct: 63 NNYPSDIDQWHDKIFVTMLRYN-GVPSSLNVISKKVGDG-GPLLQPYPDWSFAKYDDCSG 120
Query: 442 LTSVYRTAIDSCARLWMVDTGLLEVPGARRQVKPPAILAYNWLTHKL 582
+ S + AID C RLW++D+GL+ + + P +L ++ T +L
Sbjct: 121 IVSASKLAIDKCDRLWVLDSGLV---NNTQPMCSPKLLTFDLTTSQL 164
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 55.2 bits (127), Expect = 5e-10
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Frame = +1
Query: 277 NNVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYPN-----PEAVSS 441
NN P+ I D +F+T+ R G+PS+LN I ++ PLL+PYP+ + S
Sbjct: 63 NNYPSDIDQWHDKIFVTMLRYN-GVPSSLNVISKKVGDG-GPLLQPYPDWSFAKYDDCSG 120
Query: 442 LTSVYRTAIDSCARLWMVDTGLLEVPGARRQVKPPAILAYNWLTHKL 582
+ S + AID C RLW++D+GL+ + + P +L ++ T +L
Sbjct: 121 IVSASKLAIDKCDRLWVLDSGLV---NNTQPMCSPKLLTFDLTTSQL 164
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 50.8 bits (116), Expect = 1e-08
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = +1
Query: 280 NVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYP-----NPEAVSSL 444
N P + + F+TVPR + G+PS+LN I + LL+PYP N + S +
Sbjct: 68 NYPFDVDQWRGMTFVTVPRYK-GVPSSLNVISEKIGNG-GRLLQPYPDWSWANYKDCSGI 125
Query: 445 TSVYRTAIDSCARLWMVDTGLL 510
S Y+ AID RLW++D+G++
Sbjct: 126 VSAYKIAIDKFDRLWILDSGII 147
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 47.2 bits (107), Expect = 1e-07
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = +1
Query: 280 NVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYPNPEAV-----SSL 444
N P + D F+T+ R G+PSTLN I + K LLKPYP+ S +
Sbjct: 65 NYPFDVDQWRDKTFVTILRYD-GVPSTLNVISGKTGKG-GRLLKPYPDWSFAEFKDCSKI 122
Query: 445 TSVYRTAIDSCARLWMVDTGLL 510
S ++ AID RLW++D+GL+
Sbjct: 123 VSAFKIAIDKFDRLWVLDSGLV 144
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 45.6 bits (103), Expect = 4e-07
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = +1
Query: 280 NVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYP-----NPEAVSSL 444
N P + + FL V R G+PS+LN I + LL+PYP N + S +
Sbjct: 68 NYPFDVDQWHNKTFLAVIRYD-GVPSSLNVISEKIGNG-GCLLQPYPDWSWANYKDCSGI 125
Query: 445 TSVYRTAIDSCARLWMVDTGLLEVPGARRQVKPPAILAYNWLTHKL 582
S Y+ AID RLW++D+GL+ + + P +LA++ T KL
Sbjct: 126 VSAYKIAIDKFDRLWVLDSGLI---NNIQLMCSPKLLAFDLNTSKL 168
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 42.7 bits (96), Expect = 3e-06
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Frame = +1
Query: 142 LYAWKQLGYDFNGTKYIKDADRIRSPGAIHFVQELGDSEKFFIQYNNVPTGIKFVGDLLF 321
++ WK L YDF+ + R AI + G+ ++ N P + + F
Sbjct: 39 IHKWKYLDYDFDNDE--------RRQAAI----QSGEYDRT----KNYPLDVDQWHNKTF 82
Query: 322 LTVPRRRFGIPSTLNYIDRRHSKKLDPLLKPYPN-----PEAVSSLTSVYRTAIDSCARL 486
L V R G+PS+LN + + LL+PYP+ E S + S ++ AID RL
Sbjct: 83 LAVIRYN-GVPSSLNVVSDKTGNG-GRLLQPYPDWSFAKYEDCSGIVSAHKIAIDEYERL 140
Query: 487 WMVDTGLL 510
W++D+GL+
Sbjct: 141 WVLDSGLV 148
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,454
Number of Sequences: 438
Number of extensions: 4584
Number of successful extensions: 32
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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