Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26l16
(474 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132673-1|AAI32674.1| 713|Homo sapiens striatin, calmodulin bi... 83 5e-16
BC126221-1|AAI26222.1| 713|Homo sapiens striatin, calmodulin bi... 83 5e-16
BC106879-1|AAI06880.1| 731|Homo sapiens STRN protein protein. 81 1e-15
BC106878-1|AAI06879.1| 755|Homo sapiens STRN protein protein. 81 1e-15
AJ223814-1|CAA11560.1| 780|Homo sapiens striatin protein. 81 1e-15
AC007404-1|AAY24273.1| 163|Homo sapiens unknown protein. 81 1e-15
U17989-1|AAB81551.1| 713|Homo sapiens GS2NA protein. 79 6e-15
BC034604-1|AAH34604.1| 753|Homo sapiens striatin, calmodulin bi... 73 5e-13
AF212940-1|AAF29527.1| 753|Homo sapiens zinedin protein. 73 5e-13
AB209003-1|BAD92240.1| 755|Homo sapiens Zinedin variant protein. 73 5e-13
>BC132673-1|AAI32674.1| 713|Homo sapiens striatin, calmodulin
binding protein 3 protein.
Length = 713
Score = 83.0 bits (196), Expect = 5e-16
Identities = 35/48 (72%), Positives = 43/48 (89%)
Frame = +3
Query: 330 SQSVQYSIPGILHFIQHEWARFQLERSPWEVDXAEXEARIAFLQGERK 473
S+ QY+IPGILH+IQHEWARF++ER+ WEV+ AE +ARIAFLQGERK
Sbjct: 58 SRPQQYTIPGILHYIQHEWARFEMERAHWEVERAELQARIAFLQGERK 105
>BC126221-1|AAI26222.1| 713|Homo sapiens striatin, calmodulin
binding protein 3 protein.
Length = 713
Score = 83.0 bits (196), Expect = 5e-16
Identities = 35/48 (72%), Positives = 43/48 (89%)
Frame = +3
Query: 330 SQSVQYSIPGILHFIQHEWARFQLERSPWEVDXAEXEARIAFLQGERK 473
S+ QY+IPGILH+IQHEWARF++ER+ WEV+ AE +ARIAFLQGERK
Sbjct: 58 SRPQQYTIPGILHYIQHEWARFEMERAHWEVERAELQARIAFLQGERK 105
>BC106879-1|AAI06880.1| 731|Homo sapiens STRN protein protein.
Length = 731
Score = 81.4 bits (192), Expect = 1e-15
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +3
Query: 342 QYSIPGILHFIQHEWARFQLERSPWEVDXAEXEARIAFLQGERK 473
QYS+PGILHF+QHEWARF++ER+ WEV+ AE +A+IAFLQGERK
Sbjct: 34 QYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERK 77
>BC106878-1|AAI06879.1| 755|Homo sapiens STRN protein protein.
Length = 755
Score = 81.4 bits (192), Expect = 1e-15
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +3
Query: 342 QYSIPGILHFIQHEWARFQLERSPWEVDXAEXEARIAFLQGERK 473
QYS+PGILHF+QHEWARF++ER+ WEV+ AE +A+IAFLQGERK
Sbjct: 21 QYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERK 64
>AJ223814-1|CAA11560.1| 780|Homo sapiens striatin protein.
Length = 780
Score = 81.4 bits (192), Expect = 1e-15
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +3
Query: 342 QYSIPGILHFIQHEWARFQLERSPWEVDXAEXEARIAFLQGERK 473
QYS+PGILHF+QHEWARF++ER+ WEV+ AE +A+IAFLQGERK
Sbjct: 46 QYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERK 89
>AC007404-1|AAY24273.1| 163|Homo sapiens unknown protein.
Length = 163
Score = 81.4 bits (192), Expect = 1e-15
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +3
Query: 342 QYSIPGILHFIQHEWARFQLERSPWEVDXAEXEARIAFLQGERK 473
QYS+PGILHF+QHEWARF++ER+ WEV+ AE +A+IAFLQGERK
Sbjct: 46 QYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERK 89
>U17989-1|AAB81551.1| 713|Homo sapiens GS2NA protein.
Length = 713
Score = 79.4 bits (187), Expect = 6e-15
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = +3
Query: 330 SQSVQYSIPGILHFIQHEWARFQLERSPWEVDXAEXEARIAFLQGERK 473
S+ Q +IPGILH+IQHEWARF++ER+ WEV+ AE +ARIAFLQGERK
Sbjct: 58 SRPQQNTIPGILHYIQHEWARFEMERAHWEVERAELQARIAFLQGERK 105
>BC034604-1|AAH34604.1| 753|Homo sapiens striatin, calmodulin
binding protein 4 protein.
Length = 753
Score = 72.9 bits (171), Expect = 5e-13
Identities = 29/42 (69%), Positives = 37/42 (88%)
Frame = +3
Query: 348 SIPGILHFIQHEWARFQLERSPWEVDXAEXEARIAFLQGERK 473
S+PGILHFIQHEWARF+ E++ WE + AE +A++AFLQGERK
Sbjct: 64 SLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERK 105
>AF212940-1|AAF29527.1| 753|Homo sapiens zinedin protein.
Length = 753
Score = 72.9 bits (171), Expect = 5e-13
Identities = 29/42 (69%), Positives = 37/42 (88%)
Frame = +3
Query: 348 SIPGILHFIQHEWARFQLERSPWEVDXAEXEARIAFLQGERK 473
S+PGILHFIQHEWARF+ E++ WE + AE +A++AFLQGERK
Sbjct: 64 SLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERK 105
>AB209003-1|BAD92240.1| 755|Homo sapiens Zinedin variant protein.
Length = 755
Score = 72.9 bits (171), Expect = 5e-13
Identities = 29/42 (69%), Positives = 37/42 (88%)
Frame = +3
Query: 348 SIPGILHFIQHEWARFQLERSPWEVDXAEXEARIAFLQGERK 473
S+PGILHFIQHEWARF+ E++ WE + AE +A++AFLQGERK
Sbjct: 59 SLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERK 100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,497,105
Number of Sequences: 237096
Number of extensions: 1381054
Number of successful extensions: 2071
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -