Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26l12
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 338 2e-93
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 269 1e-72
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 269 1e-72
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 269 1e-72
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 269 1e-72
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 269 1e-72
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 269 1e-72
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 269 1e-72
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 268 3e-72
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 265 2e-71
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 254 6e-68
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 220 9e-58
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 196 9e-51
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 146 2e-35
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 116 2e-26
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 107 1e-23
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 107 1e-23
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 107 1e-23
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 101 5e-22
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 56 2e-08
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 35 0.063
Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical p... 32 0.44
Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical pr... 32 0.44
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 0.77
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 29 3.1
U97552-5|AAQ01520.1| 605|Caenorhabditis elegans Hypothetical pr... 28 5.4
U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical pr... 28 5.4
U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical pr... 28 5.4
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 28 7.2
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 338 bits (832), Expect = 2e-93
Identities = 153/204 (75%), Positives = 179/204 (87%)
Frame = +3
Query: 72 DVIVNQPVVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEE 251
DVI NQPVVIDNGSGVIKAGFAG+Q PK RF N++GRPK+ RVMAG L+G+IF+GP+AE
Sbjct: 4 DVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
Query: 252 HRGLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKS 431
+RGL SI+YPMEHGIV +W+DMEKIW YI+ +DQL F EEHPVLLT+APLNP +NRE+S
Sbjct: 64 NRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERS 123
Query: 432 AEIFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVD 611
AEIFFETFNVPAL++ MQAVLSLYATGRTTG VLDSGDGVTHAVPI +GFAM H+I R+D
Sbjct: 124 AEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMD 183
Query: 612 VAGRDVTKYLRLLLRKEGVNLRTS 683
+AGRDVT+YLR+LLR+EG S
Sbjct: 184 LAGRDVTEYLRVLLRREGYEFHRS 207
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 632 GDVTPGHVDSHDAVRHREPLVYGDGVRHSIAGVQYSTRGTT 510
G T +DS D V H P+V G ++H+I + + R T
Sbjct: 150 GRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVT 190
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 269 bits (660), Expect = 1e-72
Identities = 118/198 (59%), Positives = 159/198 (80%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFET 452
KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FET
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 453 FNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVT 632
FN PA+++++QAVLSLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 633 KYLRLLLRKEGVNLRTSA 686
YL +L + G + T+A
Sbjct: 188 DYLMKILTERGYSFTTTA 205
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 269 bits (660), Expect = 1e-72
Identities = 118/198 (59%), Positives = 159/198 (80%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFET 452
KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FET
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 453 FNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVT 632
FN PA+++++QAVLSLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 633 KYLRLLLRKEGVNLRTSA 686
YL +L + G + T+A
Sbjct: 188 DYLMKILTERGYSFTTTA 205
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 269 bits (660), Expect = 1e-72
Identities = 118/198 (59%), Positives = 159/198 (80%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFET 452
KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FET
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 453 FNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVT 632
FN PA+++++QAVLSLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 633 KYLRLLLRKEGVNLRTSA 686
YL +L + G + T+A
Sbjct: 188 DYLMKILTERGYSFTTTA 205
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 269 bits (660), Expect = 1e-72
Identities = 118/198 (59%), Positives = 159/198 (80%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFET 452
KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FET
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 453 FNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVT 632
FN PA+++++QAVLSLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 633 KYLRLLLRKEGVNLRTSA 686
YL +L + G + T+A
Sbjct: 188 DYLMKILTERGYSFTTTA 205
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 269 bits (660), Expect = 1e-72
Identities = 118/198 (59%), Positives = 159/198 (80%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFET 452
KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FET
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 453 FNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVT 632
FN PA+++++QAVLSLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 633 KYLRLLLRKEGVNLRTSA 686
YL +L + G + T+A
Sbjct: 188 DYLMKILTERGYSFTTTA 205
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 269 bits (660), Expect = 1e-72
Identities = 118/198 (59%), Positives = 159/198 (80%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFET 452
KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FET
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 453 FNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVT 632
FN PA+++++QAVLSLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 633 KYLRLLLRKEGVNLRTSA 686
YL +L + G + T+A
Sbjct: 188 DYLMKILTERGYSFTTTA 205
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 269 bits (659), Expect = 1e-72
Identities = 118/198 (59%), Positives = 159/198 (80%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFET 452
KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FET
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 453 FNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVT 632
FN PA+++++QAVLSLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 633 KYLRLLLRKEGVNLRTSA 686
YL +L + G + T+A
Sbjct: 188 DYLMKILTERGYSFTTTA 205
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 268 bits (657), Expect = 3e-72
Identities = 117/198 (59%), Positives = 159/198 (80%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+++DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFET 452
KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FET
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 453 FNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVT 632
FN PA+++++QAVLSLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 633 KYLRLLLRKEGVNLRTSA 686
YL +L + G + T+A
Sbjct: 188 DYLMKILTERGYSFTTTA 205
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 265 bits (650), Expect = 2e-71
Identities = 116/198 (58%), Positives = 157/198 (79%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 273 KYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFET 452
KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FET
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFET 126
Query: 453 FNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVT 632
FN PA+++++QAVLSLYA+GRTTG VLD+GDGVTH VPIYEG+A+PH+I R+D+AGRD+T
Sbjct: 127 FNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLT 186
Query: 633 KYLRLLLRKEGVNLRTSA 686
Y+ +L + G T+A
Sbjct: 187 DYMMKILTERGYTFTTTA 204
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 254 bits (621), Expect = 6e-68
Identities = 111/188 (59%), Positives = 150/188 (79%)
Frame = +3
Query: 123 KAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSIKYPMEHGIVT 302
+AGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++KYP+EHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 303 DWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSM 482
+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FETFN PA+++++
Sbjct: 65 NWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 123
Query: 483 QAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKE 662
QAVLSLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L +
Sbjct: 124 QAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 183
Query: 663 GVNLRTSA 686
G + T+A
Sbjct: 184 GYSFTTTA 191
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 220 bits (537), Expect = 9e-58
Identities = 97/162 (59%), Positives = 131/162 (80%)
Frame = +3
Query: 201 MAGALEGEIFVGPRAEEHRGLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHP 380
M G + + +VG A+ RG+L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHP
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHP 59
Query: 381 VLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHA 560
VLLTEAPLNP+ NREK +I FETFN PA+++++QAVLSLYA+GRTTG VLDSGDGVTH
Sbjct: 60 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 119
Query: 561 VPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSA 686
VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T+A
Sbjct: 120 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 161
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 196 bits (479), Expect = 9e-51
Identities = 89/200 (44%), Positives = 132/200 (66%), Gaps = 2/200 (1%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRP--KHTRVMAGALEGEIFVGPRAEEHRGLL 266
+V+DNG+G +K G+AG P FP+ +GRP + T+ + ++ VG + R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 267 SIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFF 446
I YPM++GIV +W+DM +W++ + ++L +E +LLTE PLNP NREK ++ F
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 447 ETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRD 626
E + ++++++QAVL+LYA G TG V+DSGDGVTH P+YEGFA+ H R+D+AGRD
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD 188
Query: 627 VTKYLRLLLRKEGVNLRTSA 686
+TKYL LL + G N SA
Sbjct: 189 ITKYLIKLLLQRGYNFNHSA 208
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 146 bits (353), Expect = 2e-35
Identities = 85/208 (40%), Positives = 122/208 (58%), Gaps = 21/208 (10%)
Frame = +3
Query: 96 VIDNGSGVIKAGFAGDQIPKCRFPNYIG-RPK-----------HTRVMAGALEGEIFVGP 239
VIDNG+G K G+AG+ P+ P+ I + K + RV AG + + F+G
Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGD 69
Query: 240 RAEEHRGL-LSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRR 416
A ++KYP+ HGIV DW+ ME+ W K L E+H LLTE PLN
Sbjct: 70 EALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFK-YLRAEPEDHFFLLTEPPLNTPE 128
Query: 417 NREKSAEIFFETFNVPALFLSMQAVLSLYATGRT--------TGAVLDSGDGVTHAVPIY 572
NRE +AEI FE+FNVP L++++QAVL+L A+ + TG V+DSGDGVTH +P+
Sbjct: 129 NREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVA 188
Query: 573 EGFAMPHSIMRVDVAGRDVTKYLRLLLR 656
+G+ + I + +AGRD+T +++ LLR
Sbjct: 189 DGYVIGSCIKHIPIAGRDITYFIQSLLR 216
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 116 bits (279), Expect = 2e-26
Identities = 73/211 (34%), Positives = 113/211 (53%), Gaps = 17/211 (8%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIG----RPKHTRVMAGALE-GE----------- 224
+V D GS + GFAG++ PK P+YI P T A+E G+
Sbjct: 14 LVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQTKREKN 73
Query: 225 IFVGP-RAEEHRGLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAP 401
F+G + R +++ M+ G++ DW EKI + Y S SE HPVL +E+
Sbjct: 74 FFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSE-HPVLFSESS 132
Query: 402 LNPRRNREKSAEIFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGF 581
N R REK EI FE F VPA +LS VLS +A GRT G ++DSG T VP+++G+
Sbjct: 133 WNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGY 192
Query: 582 AMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 674
A+ H++++ + G +T+ L +L ++ +++
Sbjct: 193 AVTHAVVKCPIGGDLITEQLAQMLDQQKIDV 223
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 107 bits (256), Expect = 1e-23
Identities = 44/78 (56%), Positives = 61/78 (78%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDMEKI 326
KYP+EHGIVT+W+DMEKI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 107 bits (256), Expect = 1e-23
Identities = 44/78 (56%), Positives = 61/78 (78%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDMEKI 326
KYP+EHGIVT+W+DMEKI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 107 bits (256), Expect = 1e-23
Identities = 44/78 (56%), Positives = 61/78 (78%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDMEKI 326
KYP+EHGIVT+W+DMEKI
Sbjct: 69 KYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 101 bits (242), Expect = 5e-22
Identities = 41/75 (54%), Positives = 58/75 (77%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG A+ RG+L++
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 273 KYPMEHGIVTDWNDM 317
KYP+EHGIVT+W+DM
Sbjct: 69 KYPIEHGIVTNWDDM 83
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 56.4 bits (130), Expect = 2e-08
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 6/190 (3%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
++ DNG +K G + P+ PN I + KH + +FV EE S+
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRL-VPNSIVKAKHEKK-------RVFVAHEQEECSDKFSL 57
Query: 273 KY--PMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFF 446
Y P+E G V +W+ ++IW + + + + LT+ + S+EI F
Sbjct: 58 FYVRPIERGYVVNWDTQQQIWEKTFGSMDVEASTSR--IALTDNNYLIPALPDVSSEILF 115
Query: 447 ETFNVPALFLSMQAVL----SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 614
+ F + + + L S V+DSG T G + S++R+DV
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDV 175
Query: 615 AGRDVTKYLR 644
G+ +T L+
Sbjct: 176 GGKALTNKLK 185
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 56.4 bits (130), Expect = 2e-08
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 6/190 (3%)
Frame = +3
Query: 93 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPRAEEHRGLLSI 272
++ DNG +K G + P+ PN I + KH + +FV EE S+
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRL-VPNSIVKAKHEKK-------RVFVAHEQEECSDKFSL 57
Query: 273 KY--PMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFF 446
Y P+E G V +W+ ++IW + + + + LT+ + S+EI F
Sbjct: 58 FYVRPIERGYVVNWDTQQQIWEKTFGSMDVEASTSR--IALTDNNYLIPALPDVSSEILF 115
Query: 447 ETFNVPALFLSMQAVL----SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 614
+ F + + + L S V+DSG T G + S++R+DV
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDV 175
Query: 615 AGRDVTKYLR 644
G+ +T L+
Sbjct: 176 GGKALTNKLK 185
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 34.7 bits (76), Expect = 0.063
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 435 EIFFETFNVPALFLSMQAVLSLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 614
+I E + ++ Q L LYA TTG V+D G+ V + VP+ +G+ + +I +
Sbjct: 294 QICLEDIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPY 352
Query: 615 AGRDVTKYLRLLL 653
+ + LR L
Sbjct: 353 GSQQMGDSLRASL 365
>Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 31.9 bits (69), Expect = 0.44
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 303 DWNDMEKIWNYIYSKDQLSTFSEE 374
D D+++ W+Y+Y KD + FS+E
Sbjct: 315 DIADVDRFWDYLYEKDDIQKFSDE 338
>Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 31.9 bits (69), Expect = 0.44
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 303 DWNDMEKIWNYIYSKDQLSTFSEE 374
D D+++ W+Y+Y KD + FS+E
Sbjct: 315 DIADVDRFWDYLYEKDDIQKFSDE 338
>Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 330 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 491
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 272 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 323
>Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 330 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 491
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 236 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 287
>Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 330 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 491
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 272 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 323
>Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 330 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 491
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 236 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 287
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.1 bits (67), Expect = 0.77
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -1
Query: 652 SRSLRYLVTSRPATSTLMMLCGIANPSYMGTACVTPSPESSTAPVV 515
S S L +S P ST NPS G++ TP+P ST+PVV
Sbjct: 1246 SSSATSLSSSSPVPSTSQS----PNPSTSGSSTPTPNPSQSTSPVV 1287
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 29.1 bits (62), Expect = 3.1
Identities = 35/144 (24%), Positives = 54/144 (37%)
Frame = -1
Query: 628 TSRPATSTLMMLCGIANPSYMGTACVTPSPESSTAPVVRPVAYKLRTACIERNNAGTLNV 449
T P ST + + PS GT PS S+ P A + T +G+
Sbjct: 502 TVAPGASTESTVLQSSTPS--GTTVTLPSGSSTATAGTSPQASTVTTVTDISTVSGSTVT 559
Query: 448 SKNISADFSLFLRGFRGASVNSTGCSSEKVDSWSLL*I*FQIFSMSFQSVTIPCSIGYLM 269
S+ + S G+S+++ S + ++ + I+S S S G
Sbjct: 560 SQTAESSLSTESPTSAGSSISTVSTVSSQPSTYIPVSSASSIYSTLSGSTGSTASPG--- 616
Query: 268 LRRPRCSSARGPTKISPSSAPAIT 197
SS GP+ IS SSA +T
Sbjct: 617 TTESSGSSTSGPSTISGSSASTVT 640
>U97552-5|AAQ01520.1| 605|Caenorhabditis elegans Hypothetical
protein W05H7.4a protein.
Length = 605
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 550 TPSPESSTAPVVRPVAYKLRTACIERNNAGTLNVSKNISADFSL 419
TPSP +S P V P+A ++TA G S+ + D+ +
Sbjct: 334 TPSPTTSAPPPVDPLAAAMQTAQQMMLQQGNTYASEEVPQDYPM 377
>U97552-4|AAX55684.1| 666|Caenorhabditis elegans Hypothetical
protein W05H7.4e protein.
Length = 666
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 550 TPSPESSTAPVVRPVAYKLRTACIERNNAGTLNVSKNISADFSL 419
TPSP +S P V P+A ++TA G S+ + D+ +
Sbjct: 395 TPSPTTSAPPPVDPLAAAMQTAQQMMLQQGNTYASEEVPQDYPM 438
>U97552-3|AAQ01521.1| 663|Caenorhabditis elegans Hypothetical
protein W05H7.4b protein.
Length = 663
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 550 TPSPESSTAPVVRPVAYKLRTACIERNNAGTLNVSKNISADFSL 419
TPSP +S P V P+A ++TA G S+ + D+ +
Sbjct: 392 TPSPTTSAPPPVDPLAAAMQTAQQMMLQQGNTYASEEVPQDYPM 435
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 452 IQCTGIISFNAGRSQFVCNRSYHGCCTGL 538
I C G +S + + VCN +Y+ C G+
Sbjct: 110 INCVGRLSGDYALDKTVCNENYYQCANGI 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,253,912
Number of Sequences: 27780
Number of extensions: 364627
Number of successful extensions: 1146
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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