Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26l07
         (584 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.19 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   0.78 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   0.78 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    26   0.78 
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   1.8  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   1.8  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   2.4  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    25   2.4  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   4.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   7.3  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   9.6  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   9.6  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 0.19
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 523 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQR 419
           +QR+Q+ P +  ++ P + RP  ++ PQQ    QR
Sbjct: 458 QQRQQQQPQQQQQQRPQQQRPQ-QQRPQQQRSQQR 491



 Score = 26.6 bits (56), Expect = 0.59
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = -2

Query: 523 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 383
           RQ++QR      ++   + +   ++  QQ  + Q+  Q  HQ+Q  Q
Sbjct: 322 RQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQ 368



 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -2

Query: 523 RQREQRYPTEDDERDPVEARPHVREA--PQQHAELQRVHQVLHQEQSAQ 383
           RQ++Q+   +  ++      P +R+    QQH + Q+  Q   Q+Q  Q
Sbjct: 280 RQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQ 328



 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = -2

Query: 523 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 383
           RQ++QR   +  ++   + +   ++  QQ    Q+  Q   Q+Q  Q
Sbjct: 331 RQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQ 377



 Score = 22.6 bits (46), Expect = 9.6
 Identities = 11/47 (23%), Positives = 23/47 (48%)
 Frame = -2

Query: 523 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 383
           +Q++QR   +  ++   + R   ++  QQ  + Q+  Q   Q+Q  Q
Sbjct: 317 QQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQ 363


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 26.2 bits (55), Expect = 0.78
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 493 PRLDSAVHAAEGLRNEQGASGRQ 561
           P L+ A+   +GL+ E+GA G Q
Sbjct: 766 PNLEEAIRGPQGLQGEKGAPGIQ 788


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.2 bits (55), Expect = 0.78
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 493 PRLDSAVHAAEGLRNEQGASGRQ 561
           P L+ A+   +GL+ E+GA G Q
Sbjct: 1   PNLEEAIRGPQGLQGEKGAPGIQ 23


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 26.2 bits (55), Expect = 0.78
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 538 HFVGLRQREQRYPTEDDERDPVEARPHVREAPQQHAELQR 419
           HF G+++R  R  TE+   +  + +   R A QQ  +L +
Sbjct: 300 HFYGMQRRFNRARTEEQREERRQIKSDARAALQQAIKLSK 339


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 2   TDSVAMARSRQTPRFTSQADLPPRGPVESLIYW 100
           TDS A   +  +   T+ +DLPP  P  +   W
Sbjct: 190 TDSTATTTTPASTTTTTWSDLPPPPPTTTTTVW 222


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 2   TDSVAMARSRQTPRFTSQADLPPRGPVESLIYW 100
           TDS A   +      T+ +DLPP  P  +   W
Sbjct: 190 TDSTATTTTHAPTTTTTWSDLPPPPPTTTTTVW 222


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 490 DERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 383
           D R    +R HV   P+ H    +VH    Q+ + Q
Sbjct: 33  DPRTAPHSRHHVHMMPEMHGAYSQVHHHRAQDPTPQ 68


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 490 DERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 383
           D R    +R HV   P+ H    +VH    Q+ + Q
Sbjct: 33  DPRTAPHSRHHVHMMPEMHGAYSQVHHHRAQDPTPQ 68


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 11/47 (23%), Positives = 23/47 (48%)
 Frame = -2

Query: 523 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 383
           R+ +Q+   +  ++   + +  V++  QQH   Q+  Q   Q+Q  Q
Sbjct: 258 REWQQQQQQQQHQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQ 304


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 460 HVREAPQQHAELQRVHQVLHQEQSAQLI 377
           H    PQQ+ + Q+ HQ+ H     Q++
Sbjct: 146 HRHHLPQQYQQQQQQHQLEHNGGREQMM 173


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 454 REAPQQHAELQRVHQVLHQEQSAQ 383
           R+  QQ  +  ++HQ L Q+Q  Q
Sbjct: 209 RQLQQQQLQPNQLHQQLQQQQQQQ 232


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 481 HAHHPRLDSAVHAAEGLRNEQ 543
           H HHP   +A+HA  G+   Q
Sbjct: 349 HHHHPGHHAALHAHLGVPTSQ 369


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,394
Number of Sequences: 2352
Number of extensions: 5108
Number of successful extensions: 25
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)