Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26l07
(584 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 82 2e-16
AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical ... 30 1.1
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 29 1.8
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 29 3.2
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 27 9.8
Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical pr... 27 9.8
U39472-11|AAP86619.2| 355|Caenorhabditis elegans Serpentine rec... 27 9.8
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 27 9.8
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 27 9.8
>Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical
protein W06A7.3e protein.
Length = 204
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/113 (33%), Positives = 66/113 (58%)
Frame = +2
Query: 227 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 406
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 58 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 117
Query: 407 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANL 565
++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +L
Sbjct: 118 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 170
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/113 (33%), Positives = 66/113 (58%)
Frame = +2
Query: 227 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 406
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 424 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 483
Query: 407 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANL 565
++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +L
Sbjct: 484 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 536
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/113 (33%), Positives = 66/113 (58%)
Frame = +2
Query: 227 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 406
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 2338 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2397
Query: 407 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANL 565
++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +L
Sbjct: 2398 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 2450
>Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical
protein W06A7.3b protein.
Length = 222
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/113 (33%), Positives = 66/113 (58%)
Frame = +2
Query: 227 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 406
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 76 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 135
Query: 407 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANL 565
++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +L
Sbjct: 136 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 188
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/113 (33%), Positives = 66/113 (58%)
Frame = +2
Query: 227 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 406
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 2461 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2520
Query: 407 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANL 565
++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +L
Sbjct: 2521 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 2573
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 82.2 bits (194), Expect = 2e-16
Identities = 37/113 (32%), Positives = 65/113 (57%)
Frame = +2
Query: 227 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 406
F ++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 2342 FSVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2401
Query: 407 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANL 565
++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +L
Sbjct: 2402 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 2454
>AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical
protein Y53H1A.5 protein.
Length = 281
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 526 LRQREQRYPTEDDERDPVEARPHVREAPQQHAELQR 419
+++RE R ED R P+E + ++ E+ +QHA +R
Sbjct: 160 IKRREMRQKMEDSGRLPLERQKYMHESRRQHALKRR 195
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 511 QRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQ 398
Q+Y ++ PV+ RP V++ Q H E Q+ ++L Q
Sbjct: 267 QQYKPPPQQQPPVQMRPPVQQPQQNHQEEQQNAELLMQ 304
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 526 LRQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQ 410
+R+ + PT D+E P+E+RP R ++ LQRV +
Sbjct: 540 MRRLDSDRPT-DEEIPPIESRPQTRREIERDRLLQRVRE 577
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 561 LASTCALFIS*AFGSVNSAIQP--RMMSVIPLKHAPTYVRHHSSTPN 427
LA+ A+ S A+ VN A+ ++ PLK PT+ + SSTP+
Sbjct: 898 LATPEAVDFSPAYSLVNDAVHTVIQVNGSTPLKSPPTFHSYESSTPD 944
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 561 LASTCALFIS*AFGSVNSAIQP--RMMSVIPLKHAPTYVRHHSSTPN 427
LA+ A+ S A+ VN A+ ++ PLK PT+ + SSTP+
Sbjct: 898 LATPEAVDFSPAYSLVNDAVHTVIQVNGSTPLKSPPTFHSYESSTPD 944
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 523 RQREQRYPTEDDER-DPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 383
R++E++ ED ER E R H+ Q A + + + H+++ Q
Sbjct: 249 REQEEKQKNEDRERATQKERREHIERHRQAEARAKALEKEKHEQEEKQ 296
>Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical
protein R04D3.3 protein.
Length = 430
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -2
Query: 523 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQ 410
R++ Y ED++R+ +E+RP R + R H+
Sbjct: 242 RRQYPEYEYEDEDREEMESRPRRRHSNNARGRSTRKHR 279
>U39472-11|AAP86619.2| 355|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 34 protein.
Length = 355
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 434 VLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMN 541
V+LWC TY AC + +IIL + +L + ++N
Sbjct: 277 VVLWCYTYTYACM-FLPIIILTSTKIISLQRREKIN 311
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -2
Query: 523 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 383
+Q++QR+P E + P + ++Q+ HQ L +Q Q
Sbjct: 538 QQQQQRHPNEGQQFQQGPPPPPPQRIQNHQQQMQQYHQQLQVQQQQQ 584
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -2
Query: 523 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 383
+Q++QR+P E + P + ++Q+ HQ L +Q Q
Sbjct: 538 QQQQQRHPNEGQQFQQGPPPPPPQRIQNHQQQMQQYHQQLQVQQQQQ 584
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,402,438
Number of Sequences: 27780
Number of extensions: 107070
Number of successful extensions: 633
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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