Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc26l06
         (307 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121647-1|AAM51974.1|  769|Drosophila melanogaster LD21681p pro...    58   3e-09
AE013599-3670|AAF47049.1|  769|Drosophila melanogaster CG11295-P...    58   3e-09
X98094-4|CAA66723.1|  758|Drosophila melanogaster l(2)dlt protein.     44   3e-05
X83414-1|CAA58441.1|  758|Drosophila melanogaster lethal(2)denti...    44   3e-05
AE014297-2859|AAN13829.1|  819|Drosophila melanogaster CG31195-P...    28   2.0  
AE014298-3084|AAF50855.3|  447|Drosophila melanogaster CG33670-P...    26   7.9  

>AY121647-1|AAM51974.1|  769|Drosophila melanogaster LD21681p
           protein.
          Length = 769

 Score = 57.6 bits (133), Expect = 3e-09
 Identities = 30/72 (41%), Positives = 40/72 (55%)
 Frame = +1

Query: 91  MNNIXNLIDRELGLHCRFNYDTVLKRLVVNSEESFYGLQSSNVVANFEQDPPIFACRFAE 270
           MN    L  RE G      YD  L+RL V  E+S+ G+  +N   +F  +PPIF+ +FA 
Sbjct: 1   MNIYNKLRAREHGYGNERTYDFALRRLSVAKEDSWRGIAPANYCPDFNPEPPIFSAKFAN 60

Query: 271 TSGYELILALAN 306
             GY  ILA+AN
Sbjct: 61  CDGYRHILAIAN 72


>AE013599-3670|AAF47049.1|  769|Drosophila melanogaster CG11295-PA
           protein.
          Length = 769

 Score = 57.6 bits (133), Expect = 3e-09
 Identities = 30/72 (41%), Positives = 40/72 (55%)
 Frame = +1

Query: 91  MNNIXNLIDRELGLHCRFNYDTVLKRLVVNSEESFYGLQSSNVVANFEQDPPIFACRFAE 270
           MN    L  RE G      YD  L+RL V  E+S+ G+  +N   +F  +PPIF+ +FA 
Sbjct: 1   MNIYNKLRAREHGYGNERTYDFALRRLSVAKEDSWRGIAPANYCPDFNPEPPIFSAKFAN 60

Query: 271 TSGYELILALAN 306
             GY  ILA+AN
Sbjct: 61  CDGYRHILAIAN 72


>X98094-4|CAA66723.1|  758|Drosophila melanogaster l(2)dlt protein.
          Length = 758

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = +1

Query: 175 VNSEESFYGLQSSNVVANFEQDPPIFACRFAETSGYELILALAN 306
           V  E+S+ G+  +N   +F  +PPIF+ +FA   GY  ILA+AN
Sbjct: 18  VAKEDSWRGIAPANYCPDFNPEPPIFSAKFANCDGYRHILAIAN 61


>X83414-1|CAA58441.1|  758|Drosophila melanogaster
           lethal(2)denticleless protein.
          Length = 758

 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = +1

Query: 175 VNSEESFYGLQSSNVVANFEQDPPIFACRFAETSGYELILALAN 306
           V  E+S+ G+  +N   +F  +PPIF+ +FA   GY  ILA+AN
Sbjct: 18  VAKEDSWRGIAPANYCPDFNPEPPIFSAKFANCDGYRHILAIAN 61


>AE014297-2859|AAN13829.1|  819|Drosophila melanogaster CG31195-PA
           protein.
          Length = 819

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +1

Query: 136 CRFNYDTVLKRLVVNSEESFYGLQSSNVVANFEQDPPIFACRFAETSGYELILAL 300
           C   Y+   + L+   +      +  N+VA+ E    +F CR A  SG +  L L
Sbjct: 749 CLQGYEYPFEDLITYYDGQLVEAEYQNIVADVETRYDMFKCRLAGASGLQSALGL 803


>AE014298-3084|AAF50855.3|  447|Drosophila melanogaster CG33670-PA
           protein.
          Length = 447

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 175 VNSEESFYGLQSSNVVANFEQDPPI 249
           +NSE  +  ++ +NV+ N  + PPI
Sbjct: 19  INSENPYNNIRPANVICNTTERPPI 43


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,825,184
Number of Sequences: 53049
Number of extensions: 198761
Number of successful extensions: 434
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)