Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26l04
(642 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 29 0.57
SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizos... 29 0.75
SPAC977.06 |||S. pombe specific DUF999 family protein 3|Schizosa... 28 1.00
SPBPB2B2.07c |||S. pombe specific DUF999 protein family 7|Schizo... 28 1.00
SPBPB2B2.14c |||S. pombe specific DUF999 protein family 8|Schizo... 28 1.00
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 4.0
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 26 4.0
SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|c... 26 4.0
SPAC3H5.04 |aar2||U5 snRNP-associated protein Aar2|Schizosacchar... 26 5.3
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 26 5.3
SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr 3|... 26 5.3
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 25 7.0
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 7.0
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 25 9.3
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 25 9.3
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 29.1 bits (62), Expect = 0.57
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 635 CLPY-YRPSYSTRAGSNFHKRYDFEYYLR 552
CL Y Y P S A +H+ Y++ YY+R
Sbjct: 254 CLGYTYMPDESPSANYPYHEAYEYYYYIR 282
>SPBC1348.07 |||S. pombe specific DUF999 protein family
6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 28.7 bits (61), Expect = 0.75
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 93 CKQDSLGSSKLFENIV*PQKSKI 25
CK + + LF NIV PQK KI
Sbjct: 17 CKPEKVNKQNLFTNIVKPQKDKI 39
>SPAC977.06 |||S. pombe specific DUF999 family protein
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 189
Score = 28.3 bits (60), Expect = 1.00
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 93 CKQDSLGSSKLFENIV*PQKSKI 25
CK + + LF NI+ PQK KI
Sbjct: 17 CKPEKVNKQNLFTNIIKPQKDKI 39
>SPBPB2B2.07c |||S. pombe specific DUF999 protein family
7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 165
Score = 28.3 bits (60), Expect = 1.00
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 93 CKQDSLGSSKLFENIV*PQKSKI 25
CK + + LF NI+ PQK KI
Sbjct: 37 CKPEKVNKQNLFTNIIKPQKDKI 59
>SPBPB2B2.14c |||S. pombe specific DUF999 protein family
8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 28.3 bits (60), Expect = 1.00
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 93 CKQDSLGSSKLFENIV*PQKSKI 25
CK + + LF NI+ PQK KI
Sbjct: 17 CKPEKVNKQNLFTNIIKPQKDKI 39
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 176 STRSSAQAGRNSLYEINRREKSRTRSKITSD 268
S R A R++L + NR+ KS+ + ITSD
Sbjct: 31 SRRKGKSALRSALEKKNRKSKSKPKVTITSD 61
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 26.2 bits (55), Expect = 4.0
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +3
Query: 249 VQKLQVISKRNRLTGFTIGAGVLGV----YLYSIFAIKQETFLDDFDEPPKI 392
+ L++ ++ T IGAG+ G+ L ++FA ++ FL ++PP+I
Sbjct: 246 ISSLKLDESLSQKTVAIIGAGMAGISCARQLTNLFAQYEQDFLSRGEKPPRI 297
>SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 216
Score = 26.2 bits (55), Expect = 4.0
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 143 RLRI*TENQWYSTRSSAQAGRNSLYEINRREKSRTRSKITSDFETQSTDWLHDRSRSVGC 322
+L I N + T S R EI+ E S R+++ S F+TQ+ W+ G
Sbjct: 149 QLNIDRLNHYDETASQDLKLRELSAEIDT-EMSNFRTQLAS-FKTQTLQWVFGIVTGSGA 206
Query: 323 LLVFYLR 343
LL+ Y+R
Sbjct: 207 LLLAYVR 213
>SPAC3H5.04 |aar2||U5 snRNP-associated protein
Aar2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 346
Score = 25.8 bits (54), Expect = 5.3
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 344 GEDRIQVNTQHSGSYREASQSIAFRNHL*FLNAFAISLFD*FHISYFGLLEHW 186
G +R + S ++ QS+ N + L +IS +S++G LEHW
Sbjct: 165 GPERSKQAIDKSFLFQRLVQSVWNDNPISALAELSISFLSYSILSHYGALEHW 217
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 352 RRRSLTISTSPRKYSSNHGRR*NCITDKAASTT 450
+ S + + SPR+ S HG R C++ A+S++
Sbjct: 498 KNHSKSNTLSPRRKGSRHGPREPCLSPDASSSS 530
>SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr
3|||Manual
Length = 565
Score = 25.8 bits (54), Expect = 5.3
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 15 YISKFSIFEVTLYFRIISNYLMSLVCI 95
Y+S+ S+ TL++ +IS +L+ ++ I
Sbjct: 75 YLSQLSVTNQTLFYALISQHLIEMIPI 101
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 144 DSAYKPKISGTQQDPVLKQAEIAYMKLIEERNRERVQKLQV 266
+S+Y S + +LK + + +EE+N+ERV L++
Sbjct: 371 NSSYAQDSSTIPEKTLLKDTFLQNREALEEQNKERVTALEL 411
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 272 ETQSTDWLHDRSRSVGCLLVFYLRHQTGDVP 364
+ S+ WL DR + L F L+ T +VP
Sbjct: 1138 QDHSSKWLFDRQVDILTALFFTLKDTTSEVP 1168
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/49 (22%), Positives = 26/49 (53%)
Frame = +3
Query: 138 MGDSAYKPKISGTQQDPVLKQAEIAYMKLIEERNRERVQKLQVISKRNR 284
+ +S YK + Q +L Q + +++++ + ++LQ +SK N+
Sbjct: 462 LAESTYKELMDRVQNKDLLCQEQARKLEVLDLNVKSSREQLQYVSKSNQ 510
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 4 CLWITYPNFRFLRLHYIFE*FRTT**VLFALINITCYYL 120
C + YP +R+HY+ E T +F L+ I+ +++
Sbjct: 249 CYQLYYPRTAHVRIHYLIECALGTFGCIFLLVIISDHFM 287
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,673,323
Number of Sequences: 5004
Number of extensions: 53959
Number of successful extensions: 143
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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