Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26k20
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 100 2e-21
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 73 2e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 73 2e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 73 2e-13
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 72 3e-13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 72 3e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 71 5e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 71 5e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 71 5e-13
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 43 2e-04
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 43 2e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 42 3e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 42 3e-04
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 40 0.001
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 40 0.002
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 40 0.002
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 40 0.002
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 39 0.003
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 39 0.003
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 39 0.003
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.004
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.004
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 37 0.010
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 37 0.010
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.013
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 35 0.039
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.068
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.068
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.16
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 32 0.36
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.36
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 32 0.36
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 32 0.36
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 31 0.84
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 31 0.84
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 0.84
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 30 1.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 30 1.5
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 30 1.5
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 30 1.5
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 1.9
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 1.9
Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 2.6
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 2.6
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 29 2.6
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 2.6
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 29 2.6
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 3.4
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 4.5
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 4.5
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 4.5
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 4.5
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 28 5.9
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 27 7.8
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 27 7.8
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 27 7.8
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 99.5 bits (237), Expect = 2e-21
Identities = 46/119 (38%), Positives = 60/119 (50%)
Frame = +1
Query: 184 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG 363
S CY C TGHF+R+C +GG G C+ C GH++RDC G
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSE-GGSGG 93
Query: 364 TGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRNCPDGT 540
G E +S CYNC ++GHI+R C E G + CY C ++GHISR+CP T
Sbjct: 94 YGGRGGE-GRSFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCPSQT 150
Score = 98.3 bits (234), Expect = 4e-21
Identities = 56/154 (36%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Frame = +1
Query: 175 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD---- 342
MS CYKC + GH +R C G G C+ C TGHF+RDC +
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRG-GGGGSTCYNCQETGHFSRDCPKGGSGGGQ 59
Query: 343 --------RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATXTCYNC 498
CY C G GH +R+C PS + +G E GR CYNC
Sbjct: 60 RGGGGGGGSCYNCGGRGHYSRDC------PSARSEGGSGGYGGRGGE-GRSFGGQKCYNC 112
Query: 499 NKSGHISRNCPDG----TKTCYVCGKPGHISREC 588
+SGHISR C + K CY C + GHISR+C
Sbjct: 113 GRSGHISRECTESGSAEEKRCYQCQETGHISRDC 146
Score = 79.8 bits (188), Expect = 1e-15
Identities = 45/124 (36%), Positives = 59/124 (47%), Gaps = 37/124 (29%)
Frame = +1
Query: 337 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATX- 483
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 484 ------TCYNCNKSGHISRNCPD--------------------GTKTCYVCGKPGHISRE 585
+CYNC GH SR+CP G + CY CG+ GHISRE
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121
Query: 586 CDEA 597
C E+
Sbjct: 122 CTES 125
Score = 73.3 bits (172), Expect = 1e-13
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 18/82 (21%)
Frame = +1
Query: 409 SCYNCNKTGHIARNCP----EGGRE--SATXTCYNCNKSGHISRNCPDGTK--------- 543
+CY C + GHI+RNCP +GGR TCYNC ++GH SR+CP G
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGG 64
Query: 544 ---TCYVCGKPGHISRECDEAR 600
+CY CG GH SR+C AR
Sbjct: 65 GGGSCYNCGGRGHYSRDCPSAR 86
Score = 53.2 bits (122), Expect = 1e-07
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD 342
CY C R+GH +RECT+ G + + ++C++C TGH +RDC + +
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQCQETGHISRDCPSQTN 151
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.5 bits (170), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +1
Query: 262 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 420
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 421 CNKTGHIARNCPE----------GGRESATXTCYNCNKSGHISRNCPDGTKTCYVCGKPG 570
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 571 HISREC 588
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 366
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 367 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATXTCYNC 498
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 499 NKSGHISRNCPDGTK 543
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 460 GGRESATXTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 600
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 9e-06
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +1
Query: 187 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 285
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 286 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 408
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.5 bits (170), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +1
Query: 262 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 420
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 421 CNKTGHIARNCPE----------GGRESATXTCYNCNKSGHISRNCPDGTKTCYVCGKPG 570
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 571 HISREC 588
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 366
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 367 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATXTCYNC 498
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 499 NKSGHISRNCPDGTK 543
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 460 GGRESATXTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 600
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 9e-06
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +1
Query: 187 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 285
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 286 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 408
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 72.5 bits (170), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +1
Query: 262 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 420
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 421 CNKTGHIARNCPE----------GGRESATXTCYNCNKSGHISRNCPDGTKTCYVCGKPG 570
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 571 HISREC 588
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 366
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 367 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATXTCYNC 498
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 499 NKSGHISRNCPDGTK 543
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 460 GGRESATXTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 600
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 9e-06
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +1
Query: 187 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 285
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 286 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 408
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 72.1 bits (169), Expect = 3e-13
Identities = 42/124 (33%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 360
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 361 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATXTCYNCNKSGHISRNCP 531
GH A +C Q P P C NC + GH A++C E R T C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 532 DGTK 543
K
Sbjct: 682 TRPK 685
Score = 64.9 bits (151), Expect = 4e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +1
Query: 286 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 450
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 451 CPEGGRESATXTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 588
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 60.9 bits (141), Expect = 7e-10
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +1
Query: 298 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 471
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 472 SATXTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISRECDEAR 600
C NC GH + +C D K C CG+ GH +++C R
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 47.6 bits (108), Expect = 7e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 351
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 352 RCNGTGHIARECAQSPDE 405
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 72.1 bits (169), Expect = 3e-13
Identities = 42/124 (33%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 360
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 361 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATXTCYNCNKSGHISRNCP 531
GH A +C Q P P C NC + GH A++C E R T C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 532 DGTK 543
K
Sbjct: 682 TRPK 685
Score = 64.9 bits (151), Expect = 4e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +1
Query: 286 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 450
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 451 CPEGGRESATXTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 588
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 60.9 bits (141), Expect = 7e-10
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Frame = +1
Query: 298 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 471
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 472 SATXTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISRECDEAR 600
C NC GH + +C D K C CG+ GH +++C R
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNER 658
Score = 47.6 bits (108), Expect = 7e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 351
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 352 RCNGTGHIARECAQSPDE 405
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 71.3 bits (167), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +1
Query: 274 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 417
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 418 NCNKTGHIARNCPEG---GRESATXTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 588
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 61.7 bits (143), Expect = 4e-10
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 15/134 (11%)
Frame = +1
Query: 187 VCYKCNRTGHFARECTQ--------GGVVSRDSGF--NRQREKCFKCNRTGHFARDCKEE 336
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 337 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRESATXTCYNCN 501
+ + N G + Q E +C+NC + GH + +CPE +E CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 502 KSGHISRNCPDGTK 543
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 187 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 351
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 352 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 456
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 6e-09
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 409 SCYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRNCPDGTK 543
+C+NC + GH + +CPE +E CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 57.6 bits (133), Expect = 6e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 363
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 364 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATX 483
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 484 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 600
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 366
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 367 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATXTCYNCNK 504
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 505 SGHISRNCPDGTK 543
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +1
Query: 304 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 459
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 460 GGRESATXTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 594
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 466 RESATXTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 600
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 304 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 459
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +1
Query: 274 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 393
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 71.3 bits (167), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +1
Query: 274 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 417
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 418 NCNKTGHIARNCPEG---GRESATXTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 588
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 61.7 bits (143), Expect = 4e-10
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 15/134 (11%)
Frame = +1
Query: 187 VCYKCNRTGHFARECTQ--------GGVVSRDSGF--NRQREKCFKCNRTGHFARDCKEE 336
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 337 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRESATXTCYNCN 501
+ + N G + Q E +C+NC + GH + +CPE +E CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 502 KSGHISRNCPDGTK 543
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 187 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 351
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 352 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 456
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 6e-09
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 409 SCYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRNCPDGTK 543
+C+NC + GH + +CPE +E CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 57.6 bits (133), Expect = 6e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 363
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 364 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATX 483
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 484 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 600
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 366
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 367 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATXTCYNCNK 504
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 505 SGHISRNCPDGTK 543
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +1
Query: 304 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 459
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 460 GGRESATXTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 594
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 466 RESATXTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 600
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 304 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 459
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +1
Query: 274 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 393
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 71.3 bits (167), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +1
Query: 274 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 417
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 418 NCNKTGHIARNCPEG---GRESATXTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 588
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 61.7 bits (143), Expect = 4e-10
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 15/134 (11%)
Frame = +1
Query: 187 VCYKCNRTGHFARECTQ--------GGVVSRDSGF--NRQREKCFKCNRTGHFARDCKEE 336
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 337 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRESATXTCYNCN 501
+ + N G + Q E +C+NC + GH + +CPE +E CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 502 KSGHISRNCPDGTK 543
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 187 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 351
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 352 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 456
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 57.6 bits (133), Expect = 6e-09
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 409 SCYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRNCPDGTK 543
+C+NC + GH + +CPE +E CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 57.6 bits (133), Expect = 6e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 363
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 364 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATX 483
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 484 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 600
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 366
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 367 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATXTCYNCNK 504
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 505 SGHISRNCPDGTK 543
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +1
Query: 304 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 459
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 460 GGRESATXTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 594
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 466 RESATXTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 600
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 304 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 459
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +1
Query: 274 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 393
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 60.5 bits (140), Expect = 9e-10
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Frame = +1
Query: 238 GGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 408
G V D+ +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 409 SCYNCNKTGHIARNCPEGGRESATX-TCYNCNKSGHISRNC--------PDGTKTCYVCG 561
C+ C H C + G + TC+ C + GHISR+C PDG C VCG
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDG-GCCNVCG 313
Query: 562 KPGHISRECDE 594
H+ R+C E
Sbjct: 314 ANTHLRRDCPE 324
Score = 60.5 bits (140), Expect = 9e-10
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Frame = +1
Query: 175 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR--- 345
++ S C+ C GH +C + S D CFKC H +CK++ +
Sbjct: 226 ITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGFP 278
Query: 346 ---CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRESA 477
C+ C GHI+R+C Q+ PD C C H+ R+CPE + A
Sbjct: 279 YATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPELAAQKA 330
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 454 PEGGRESATXTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEAR 600
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 154
Score = 35.5 bits (78), Expect = 0.029
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 343 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 471
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 283 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 393
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 454 PEGGRESATXTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEAR 600
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.5 bits (78), Expect = 0.029
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 343 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 471
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 283 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 393
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 454 PEGGRESATXTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEAR 600
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.5 bits (78), Expect = 0.029
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 343 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 471
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 283 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 393
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 454 PEGGRESATXTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEAR 600
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERR 185
Score = 35.5 bits (78), Expect = 0.029
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 343 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 471
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 283 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 393
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 42.3 bits (95), Expect = 3e-04
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 484 TCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 588
TC+NC K GH + C + C CG P H + EC
Sbjct: 203 TCFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 286 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 390
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.039
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 409 SCYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRNCPDGTK 543
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 337 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 453
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 181 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 327
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 42.3 bits (95), Expect = 3e-04
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 484 TCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 588
TC+NC K GH + C + C CG P H + EC
Sbjct: 203 TCFNCKKYGHRATECSAPQRECANCGDPNHRANEC 237
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 286 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 390
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.039
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 409 SCYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRNCPDGTK 543
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 337 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 453
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 181 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 327
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = -2
Query: 538 CRRDSCGRCGRTCCSYSRXASQTPAPPRDSSVRCG-PSCCSCNTTARPGSVRTRALCAPC 362
C S G CG+TCC APP S CG P C C V T C C
Sbjct: 66 CGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCKCC 114
Query: 361 RYICSNGQPLPCNPSQSVLCGCT 293
+ +C+N C CGCT
Sbjct: 115 QPVCTNA----CTNGGGCSCGCT 133
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +1
Query: 280 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 444
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 445 RNCPE 459
NCP+
Sbjct: 688 WNCPK 692
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 181 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 357
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 628 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 680
Query: 358 NGTGHIARECAQSPDEPS 411
N GHIA C + + S
Sbjct: 681 NEMGHIAWNCPKKNENTS 698
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 391 QSPDEPSCYNCNKTGHIARNCPEGGRESATXTCYNCNKSG-HISRNCPDGTKTCYVCGKP 567
Q+P + C +C + G C + +++A+ C C +SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 568 GHISREC 588
GHI+ C
Sbjct: 684 GHIAWNC 690
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 337 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATXTCYNCNKS 507
+DRC C G C++ S D S C C ++G +C + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 508 GHISRNCP 531
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +1
Query: 280 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 444
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 445 RNCPE 459
NCP+
Sbjct: 591 WNCPK 595
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 181 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 357
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 531 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 583
Query: 358 NGTGHIARECAQSPDEPS 411
N GHIA C + + S
Sbjct: 584 NEMGHIAWNCPKKNENTS 601
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 391 QSPDEPSCYNCNKTGHIARNCPEGGRESATXTCYNCNKSG-HISRNCPDGTKTCYVCGKP 567
Q+P + C +C + G C + +++A+ C C +SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 568 GHISREC 588
GHI+ C
Sbjct: 587 GHIAWNC 593
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 337 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATXTCYNCNKS 507
+DRC C G C++ S D S C C ++G +C + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 508 GHISRNCP 531
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +1
Query: 280 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 444
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 445 RNCPE 459
NCP+
Sbjct: 602 WNCPK 606
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 181 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 357
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 542 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 594
Query: 358 NGTGHIARECAQSPDEPS 411
N GHIA C + + S
Sbjct: 595 NEMGHIAWNCPKKNENTS 612
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 391 QSPDEPSCYNCNKTGHIARNCPEGGRESATXTCYNCNKSG-HISRNCPDGTKTCYVCGKP 567
Q+P + C +C + G C + +++A+ C C +SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 568 GHISREC 588
GHI+ C
Sbjct: 598 GHIAWNC 604
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 337 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATXTCYNCNKS 507
+DRC C G C++ S D S C C ++G +C + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 508 GHISRNCP 531
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 38.7 bits (86), Expect = 0.003
Identities = 35/138 (25%), Positives = 50/138 (36%), Gaps = 15/138 (10%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 360
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 361 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATXTCYNCNKSGHI 516
T + A+ C S +E CN K G+ C G + + +C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 517 ----SRNCPDGTKTCYVC 558
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.1 bits (67), Expect = 0.63
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Frame = +1
Query: 208 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 372
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 373 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATXTCYNCNKSGHISRNCPDGT 540
+ + P+ CY C N G +C G C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 541 KTC 549
C
Sbjct: 2005 GGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 38.7 bits (86), Expect = 0.003
Identities = 35/138 (25%), Positives = 50/138 (36%), Gaps = 15/138 (10%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 360
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 361 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATXTCYNCNKSGHI 516
T + A+ C S +E CN K G+ C G + + +C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 517 ----SRNCPDGTKTCYVC 558
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.1 bits (67), Expect = 0.63
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Frame = +1
Query: 208 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 372
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 373 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATXTCYNCNKSGHISRNCPDGT 540
+ + P+ CY C N G +C G C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 541 KTC 549
C
Sbjct: 2005 GGC 2007
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 38.7 bits (86), Expect = 0.003
Identities = 35/138 (25%), Positives = 50/138 (36%), Gaps = 15/138 (10%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 360
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 361 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATXTCYNCNKSGHI 516
T + A+ C S +E CN K G+ C G + + +C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 517 ----SRNCPDGTKTCYVC 558
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.1 bits (67), Expect = 0.63
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Frame = +1
Query: 208 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 372
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 373 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATXTCYNCNKSGHISRNCPDGT 540
+ + P+ CY C N G +C G C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 541 KTC 549
C
Sbjct: 2005 GGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 38.7 bits (86), Expect = 0.003
Identities = 35/138 (25%), Positives = 50/138 (36%), Gaps = 15/138 (10%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 360
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 361 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATXTCYNCNKSGHI 516
T + A+ C S +E CN K G+ C G + + +C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 517 ----SRNCPDGTKTCYVC 558
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.1 bits (67), Expect = 0.63
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Frame = +1
Query: 208 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 372
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 373 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATXTCYNCNKSGHISRNCPDGT 540
+ + P+ CY C N G +C G C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 541 KTC 549
C
Sbjct: 2005 GGC 2007
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 412 CYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRNC 528
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 307 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 462
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.039
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +1
Query: 487 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 588
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCK 330
C C H + EC V+ KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQI-------KCTNCGAFGHISKDCK 469
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 412 CYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRNC 528
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 307 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 462
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.039
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +1
Query: 487 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 588
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCK 330
C C H + EC V+ KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQI-------KCTNCGAFGHISKDCK 469
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +1
Query: 316 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATXTCYN 495
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 496 CNKSGHISRNCPDG 537
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 409 SCYNCNKTGHIARNCPE-GGRESATXTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRE 585
+C+NC++ GH A CP G+ ++ I TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 586 C 588
C
Sbjct: 265 C 265
Score = 34.7 bits (76), Expect = 0.051
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +1
Query: 286 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 450
C C+ GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 451 CPEGGRESATXTCY 492
C +G + T +
Sbjct: 265 CHKGALAFLSNTAH 278
Score = 31.9 bits (69), Expect = 0.36
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Frame = +1
Query: 148 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR-------EK------- 285
A +KP + C+ C+ GH A C +R + + R +K
Sbjct: 192 AVSHAKPTYSQAITCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVT 251
Query: 286 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE 384
C+KC GH+A C + A + N T H+A E
Sbjct: 252 CYKCGEKGHYANRCHKGA-LAFLSN-TAHLAHE 282
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 37.1 bits (82), Expect = 0.010
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Frame = +1
Query: 223 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 402
R C Q + + GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 403 E----PSCYNCNKTGHIARNCPEGGRESATXTCYNCN--KSGHISRNCPDG 537
P C C H A C + ++ C C +GH C DG
Sbjct: 882 GFWGFPECRTCQCNDH-ANIC-----DQSSGACIECRDLTTGHYCDRCQDG 926
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 36.7 bits (81), Expect = 0.013
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 487 CYNCNKSGHISRNCPDG 537
CY C + GHISRNCP+G
Sbjct: 6 CYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.029
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 409 SCYNCNKTGHIARNCPEG 462
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 175 MSSSVCYKCNRTGHFARECTQG 240
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 31.1 bits (67), Expect = 0.63
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 541 KTCYVCGKPGHISREC 588
+ CY C +PGHISR C
Sbjct: 4 RNCYKCQQPGHISRNC 19
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 286 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 375
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +1
Query: 337 ADR-CYRCNGTGHIAREC 387
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.1 bits (77), Expect = 0.039
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +1
Query: 346 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATXTCYNCNKSG 510
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.27
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 406 PSCYNCNKTGHIARNCPEGGRES 474
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 2.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 487 CYNCNKSGHISRNCPDGT 540
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 282
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.068
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 346 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRN 525
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.068
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 346 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRN 525
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 5/82 (6%)
Frame = -2
Query: 526 SCGRCGRTCCSYSRXASQTPAPPRDSSVRCGPSC---CS--CNTTARPGSVRTRALCAPC 362
+C +C +C + + + +C P C C C T A C
Sbjct: 231 NCQQCQNSCQNSNTQTITIYVQASPQTSQCVPQCQQQCQQQCQTRTTASQQCAPACSTSC 290
Query: 361 RYICSNGQPLPCNPSQSVLCGC 296
C+ + C P Q+ CGC
Sbjct: 291 NQSCNQPAQMACQPMQNSQCGC 312
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Frame = +1
Query: 373 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGG---------RESATXTCYNCNKSGHIS 519
+ R+C Q +P + C+ C++ GH +CP+ ++T + Y N SG
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGF 1401
Query: 520 RNCPDG 537
+N +G
Sbjct: 1402 KNGEEG 1407
Score = 31.1 bits (67), Expect = 0.63
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +1
Query: 223 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 402
R+C QG + +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGSAPT-----DRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 403 EPSCYNCNKTGHIARNCPEGG 465
S Y N +G +N EGG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEGG 1408
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVV--SRDSGFNRQREKCFKCNRTGHFARDCKEEADR 345
C++C+R GHF C Q + +R + ++ N +G ++ +E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 31.9 bits (69), Expect = 0.36
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Frame = -2
Query: 535 RRDSCGRCGRTCCSYSRXASQ-TPAPPRDSSVRC-GPSC---CS--CNTTARPGSVRTRA 377
RR CGR +CCS S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 376 LCAPCRYICSNGQPLP 329
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
Score = 28.3 bits (60), Expect = 4.5
Identities = 24/112 (21%), Positives = 36/112 (32%)
Frame = -2
Query: 526 SCGRCGRTCCSYSRXASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAPCRYICS 347
S C +C + A T + C SC SC+ + + PC C+
Sbjct: 172 SSRNCQNSCQNQCSSACTTMTCRQTCQNTCLGSCNSCSGGGCNSNNSNLVVVTPCERSCN 231
Query: 346 NGQPLPCNPSQSVLCGCT*STSHVADXXXXXXXXXXXACIRARNARSGCTCS 191
+G C+ S S L C + C + S C+CS
Sbjct: 232 SGCRSTCS-STSTLSVCIPACQQTCRSTCSTAKTFVIPCTSGTSGNS-CSCS 281
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +1
Query: 397 PDEPSCYNCNKTGHIARNC---PEGG-RESATXTCYNCNKSGHISRNCP 531
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +1
Query: 181 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 345
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +1
Query: 346 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 459
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 31.9 bits (69), Expect = 0.36
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 184 SVCYKCNRTGHFAR--ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 357
S C C+ T H R EC R+ CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 358 NGTGH 372
G H
Sbjct: 371 KGNHH 375
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Frame = +1
Query: 412 CYNCNKTGHIARN--CP-----EGGRESATXT--CYNCNKSGHISRNCPDGTKTCYVCGK 564
C C+ T H+ R+ CP E + A C+ C +SGH C +TC C K
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC-K 371
Query: 565 PGHISREC 588
H + C
Sbjct: 372 GNHHTVFC 379
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -2
Query: 523 CGRCGRTCCSYSRXASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAP 365
C +C TC ++ Q AP ++ P C C TT + + + CAP
Sbjct: 174 CQQCQNTCQQFAPVCQQQCAP--QCTISSAPQCQQCQTTCQQFAPVCQQQCAP 224
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.7 bits (66), Expect = 0.84
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -2
Query: 538 CRRDSCGRCGRTCCSYSRXASQTPAPPRDSSVRCGPSCCSCNTTAR 401
CR C C RTCC +R T P CG CC C R
Sbjct: 79 CRPKCCCTCCRTCCC-TRCC--TCCRPCCCGCGCGCGCCGCGGGGR 121
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.7 bits (66), Expect = 0.84
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -2
Query: 538 CRRDSCGRCGRTCCSYSRXASQTPAPPRDSSVRCGPSCCSCNTTAR 401
CR C C RTCC +R T P CG CC C R
Sbjct: 82 CRPKCCCTCCRTCCC-TRCC--TCCRPCCCGCGCGCGCCGCGGGGR 124
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 30.7 bits (66), Expect = 0.84
Identities = 25/87 (28%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Frame = -2
Query: 538 CRRDSCGRCGRTC-----CSYSRXASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRA 377
C CG C C R Q+ R P+C S C+ G T
Sbjct: 448 CHDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG---TPG 504
Query: 376 LCAPCRYICSNGQPLPCNPSQSVLCGC 296
CR C G PCN + SV+C C
Sbjct: 505 KNHHCREKCHEGPCPPCNLNTSVICRC 531
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 0.84
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Frame = -2
Query: 508 RTCCSYSRXASQTPAPPRDSSVRCGPS-CCSC----NTTARPGSVRTRALCA-PCRY--- 356
RTCC A+ P PP P+ CC T R G C PC Y
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 355 --ICSNGQPLPCNPSQ 314
C+ GQ C P Q
Sbjct: 190 PTCCNQGQKACCPPEQ 205
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Frame = +1
Query: 352 RCNGTGHIARECAQSPDEPSCYNCNKT----GHIARNCPEGGRESATXT--CYNCNKSGH 513
RC+G ++C+ DE +C C HI + + S T C K +
Sbjct: 143 RCDGL----KDCSDGSDEENCKECQSIYSCRAHIEEESEKKDKTSVLPTLICLTAEKLCN 198
Query: 514 ISRNCPDGT 540
NCPDG+
Sbjct: 199 GVENCPDGS 207
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Frame = -2
Query: 523 CG--RCGRTCCSYSRXASQTPAPPRDSSVRCGPS-----CCSCNTTARPGSVRTRALCAP 365
CG R +CC Y A P PP +S CGPS CC P
Sbjct: 71 CGAPRPSPSCCPYVPPAPLPPPPP-PASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
Query: 364 CRYICSNGQPLPCNP 320
+C P+P NP
Sbjct: 130 SPLVCCKQAPVPENP 144
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 394 SPDEPSCYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRNCP 531
SP + +K R GR C++C + GHISR CP
Sbjct: 140 SPRSDGMGSSSKRPRSGRRTGRRGR-GGPGHCFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 4.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 412 CYNCNKTGHIARNCPE 459
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 529 PD-GTKTCYVCGKPGHISRECDEAR 600
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 529 PD-GTKTCYVCGKPGHISRECDEAR 600
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 529 PD-GTKTCYVCGKPGHISRECDEAR 600
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 297
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 271 RQREKCFKCNRTGHFARDCKEEA 339
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 487 CYNCNKSGHISRNCPDGTKTCYVC 558
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Frame = -2
Query: 514 CGRTCCSYSRXASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-APCRYIC 350
C ++C + S TPAP V+C PSC +C + P +V+ C C+ C
Sbjct: 109 CQQSCQTSSCYTPTTPAP-----VQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQCQQQC 163
Query: 349 SNGQPL-PCNPSQSVLC 302
QP+ C P C
Sbjct: 164 VQTQPIQQCQPQCQQQC 180
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +1
Query: 316 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 459
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 487 CYNCNKSGHISRNCPDGTKTCYVC 558
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical
protein F09C6.10 protein.
Length = 153
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/76 (22%), Positives = 26/76 (34%)
Frame = +1
Query: 355 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATXTCYNCNKSGHISRNCPD 534
C + E P +P C N+ + C G + T CN+ +I N
Sbjct: 36 CQSKCGVPLEIRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREY 95
Query: 535 GTKTCYVCGKPGHISR 582
CG P +S+
Sbjct: 96 ANWNMQKCGIPHVVSK 111
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -2
Query: 538 CRRDSCGRCGRTCCSYSRXASQTPAPPRDSSVRCGPSCCSCNTTAR 401
CR C C RTCC +R + CG CC C R
Sbjct: 77 CRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGCGGGGR 121
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 29.1 bits (62), Expect = 2.6
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 319 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATXTCYN 495
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 496 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 597
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.6
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 319 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATXTCYN 495
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 496 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 597
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.1 bits (62), Expect = 2.6
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 319 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATXTCYN 495
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 496 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 597
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.6
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 319 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATXTCYN 495
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 496 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 597
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Frame = -2
Query: 517 RCGRTCCSYSRXASQTPAPPRDSSVRCGPSCC-SCNTTARPGSVRTRALCAP-CRYIC-S 347
+C C + PP SS C SC C A C P C+ C S
Sbjct: 292 KCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMPQCTPQCVQQQTICAAACQPSCQSSCSS 351
Query: 346 NGQPL-PCNPSQSVLC 302
N Q + C PS C
Sbjct: 352 NAQCVQACLPSCESSC 367
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 331 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 438
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.6
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 319 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATXTCYN 495
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 496 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 597
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -2
Query: 535 RRDSCGRCGRTCCSYSRXASQTPAP-PRDSSVR-CGPSCCSCNTTARPGSVRTRALCAPC 362
R+ C R G S + SQ+P R+ + R CG SC TT RP + + + C
Sbjct: 88 RQAQCSRPGTGFGSSTPFPSQSPQRCGRNETFRTCGSSCEPSCTTPRPQACTMQCIVNVC 147
Query: 361 RYICSNG 341
+ CS G
Sbjct: 148 Q--CSEG 152
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Frame = -2
Query: 514 CGRTCCSYSRXASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-APCRYIC 350
C ++C + S TPAP V+C PSC +C + P V+ C C+ C
Sbjct: 109 CQQSCQTSSCYTPTTPAP-----VQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQCQQQC 163
Query: 349 SNGQPL-PCNPSQSVLC 302
QP+ C P C
Sbjct: 164 VQTQPIQQCQPQCQQQC 180
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 190 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN-GT 366
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 367 GHIARECAQSPDEPS 411
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
Score = 28.7 bits (61), Expect = 3.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 547 CYVCGKPGHISREC 588
CY CGK GH + EC
Sbjct: 411 CYYCGKRGHTANEC 424
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 508 RTCCSYSRXASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA 377
RTCC S + P S + C P CNT AR ++R A
Sbjct: 149 RTCCG---CVSSAASGPSSSLILCFPGGRRCNTHARTEALRGTA 189
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 463 GRESATXTCYNCNKSGHISRNCP 531
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 463 GRESATXTCYNCNKSGHISRNCP 531
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 4.5
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Frame = +1
Query: 235 QGGVVSRDSGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 387
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 388 -AQSPDEPSCYNCNKT--GHIARNCPEGGRESATXTCYNCNKSGHISRNCPDG 537
A++ +P C G C G R T CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 28.3 bits (60), Expect = 4.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -2
Query: 523 CGRCGRTCCSYSRXASQTPAPPRDSSVRC 437
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 4.5
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Frame = +1
Query: 235 QGGVVSRDSGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 387
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 388 -AQSPDEPSCYNCNKT--GHIARNCPEGGRESATXTCYNCNKSGHISRNCPDG 537
A++ +P C G C G R T CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.3 bits (60), Expect = 4.5
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Frame = +1
Query: 235 QGGVVSRDSGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 387
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 388 -AQSPDEPSCYNCNKT--GHIARNCPEGGRESATXTCYNCNKSGHISRNCPDG 537
A++ +P C G C G R T CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +1
Query: 439 IARNCPEG------GRESATXTCYNCNKSGHISRNCPDGTKTCY 552
++ CP G G S C N +G +S CPDG TCY
Sbjct: 682 LSEACPPGTVVAKDGDGSRLVQCSNPGGNGRVSGGCPDG-YTCY 724
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.9 bits (59), Expect = 5.9
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -2
Query: 517 RCGRTCCSYSRXASQTPAP-PRDSSVRCGPSCCSCNTTARPGSVRTRALC-APCRYICSN 344
RC TC + + P P PR S+ C PSC P V+ +LC CR +C+N
Sbjct: 240 RCLPTCIQQIQISVPLPPPAPRCDSM-CMPSC-------SPSCVQQYSLCPQQCRPMCTN 291
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/50 (26%), Positives = 17/50 (34%)
Frame = +1
Query: 355 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATXTCYNCNK 504
C I A +P E C NK + R C G + C+K
Sbjct: 77 CQSACGIPHVLASNPTEEVCEKWNKCDDVKRQCAAAGGNYYAGANFQCSK 126
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 27.5 bits (58), Expect = 7.8
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -2
Query: 517 RCGRTCCSYSRXA--SQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA-LCAPC--RYI 353
RC C S + A +Q APP +C P C S T+ P R A L P +
Sbjct: 331 RCSSECQSVCQLACVTQKSAPPSSCLDKCSPQCDSACTS--PQVQRNSAQLFTPSADQAP 388
Query: 352 CSNGQPLPCNPSQSVL 305
S+ QP+ N S + L
Sbjct: 389 ASSAQPIKINISLAPL 404
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 27.5 bits (58), Expect = 7.8
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Frame = +1
Query: 334 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRESATXTCYNC--NK 504
+AD + C+ G + C + E C N T + + CP G ES C C +
Sbjct: 253 QADHMHSCSAAGMYS--CGRKGSEIGVCIPMNATCNGIKECPLGDDES--KHCSECARKR 308
Query: 505 SGHISRNCPDGTK 543
H N P G +
Sbjct: 309 CDHTCMNTPHGAR 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,310,038
Number of Sequences: 27780
Number of extensions: 295934
Number of successful extensions: 1618
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -