Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc26k15
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 81 5e-16
Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical pr... 31 0.96
U40941-4|AAA81709.1| 771|Caenorhabditis elegans Hypothetical pr... 31 0.96
U40941-3|AAM51502.1| 730|Caenorhabditis elegans Hypothetical pr... 31 0.96
U41510-1|ABP49525.1| 327|Caenorhabditis elegans Hypothetical pr... 29 2.2
U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF098504-4|AAC67411.1| 339|Caenorhabditis elegans Hypothetical ... 29 2.2
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr... 28 6.8
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z75526-5|CAA99771.1| 209|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 8.9
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 8.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 8.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 8.9
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 81.4 bits (192), Expect = 5e-16
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Frame = +2
Query: 176 IGSRVKCNDDFGTVRYIGEVQGYKGL-WYGIEWDNESRGKHDGCLDGIQYFKTSKPSAGS 352
IG RV+ N + TVRYIGEV GY W G+EWD+ +RGKHDG + G +YF+T P+ GS
Sbjct: 3 IGQRVRINFEVATVRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHPNGGS 62
Query: 353 FVRPNKIIPSKT-CAEAIRQYYGDPEDETLAAHRRTIINEWKREMGAPFIEMVGFEKIHQ 529
++ ++I+P T I+ Y + E ++ E + IE++G ++
Sbjct: 63 LMK-HEIVPKPTDLLFEIKDRYIEEE---------SVETEIELAQSNKKIELIGMDQTAA 112
Query: 530 KQ-KFDRLLEVCVHDQNVSRAGDVSS----LCPNVRSLDVSRNLFSNW 658
KQ ++L+ + + +++V S LC R L++ NL W
Sbjct: 113 KQSNIEKLINIVLDNRSVGFPPSSDSPQFILC---RELNLYGNLLYKW 157
>Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical
protein F53F4.3 protein.
Length = 229
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +2
Query: 155 GNDNNVYIGSRVKCNDDFGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFKTS 334
GN V +G+++ G V Y+G + +G+W G+++D E GK+DG + G++YF
Sbjct: 149 GNRCEVTVGAQMARR---GEVAYVGATKFKEGVWVGVKYD-EPVGKNDGSVAGVRYFDCD 204
Query: 335 KPSAGSFVRP 364
P G FVRP
Sbjct: 205 -PKYGGFVRP 213
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = +2
Query: 176 IGSRVKCNDDFGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFKTSKPSAGSF 355
IG+RVK + G V + G+ Q +G W G+ D + GK++G + +QYF+ +P+ G F
Sbjct: 5 IGTRVKTSSGNGRVVFCGQTQFAEGDWVGVILDT-ATGKNNGTVQNVQYFE-CEPNFGVF 62
Query: 356 VRPNKI 373
V+ + +
Sbjct: 63 VKSSAV 68
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +2
Query: 209 GTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFKTSKPSAGSF 355
G +RY+G + G G++ GIE E GKHDG G+ YF + P G F
Sbjct: 33 GFLRYVGPIHGKDGMFCGIEL-LEPNGKHDGTFQGVSYF-IATPYHGIF 79
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +2
Query: 209 GTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFKTSKPSAGSF 355
G +RY+G + G G++ GIE E GKHDG G+ YF + P G F
Sbjct: 33 GFLRYVGPIHGKDGMFCGIEL-LEPNGKHDGTFQGVSYF-IATPYHGIF 79
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 31.1 bits (67), Expect = 0.72
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 149 VDGNDNNVYIGSRVKCN----DDFGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGI 316
V+ + N IG + N ++ G ++YIG ++G+K L+ G+E+ N + G G +
Sbjct: 451 VESDQLNFRIGDQCIWNNNGAEERGIIKYIGFLKGHKTLYAGVEFKN-TIGAGTGVFNRE 509
Query: 317 QYFKTSKPSAG 349
Q F AG
Sbjct: 510 QLFLAKDGHAG 520
>Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical
protein F09F3.5 protein.
Length = 718
Score = 30.7 bits (66), Expect = 0.96
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 206 FGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFK-TSKPSAGSFVRPNKIIPS 382
FG + E++G G + N RG+ G IQY + P+ SF N S
Sbjct: 538 FGIRNQMFEIRGRNGSGVDLVSINIQRGRDMGLFPYIQYRQLVGLPTVTSFNELNTTF-S 596
Query: 383 KTCAEAIRQYYGDPED 430
+ +A+R Y DP D
Sbjct: 597 QENIQALRNVYSDPAD 612
>U40941-4|AAA81709.1| 771|Caenorhabditis elegans Hypothetical
protein F35C8.7a protein.
Length = 771
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 81 WWAQCLLIYSQNFATVPWTVVMASMETII--TSILVVV 188
WW +LI++ + WTV+M + ++I SIL+V+
Sbjct: 312 WWQTLILIFAAGILSFIWTVIMRLLGSLIIWLSILIVL 349
>U40941-3|AAM51502.1| 730|Caenorhabditis elegans Hypothetical
protein F35C8.7b protein.
Length = 730
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 81 WWAQCLLIYSQNFATVPWTVVMASMETII--TSILVVV 188
WW +LI++ + WTV+M + ++I SIL+V+
Sbjct: 271 WWQTLILIFAAGILSFIWTVIMRLLGSLIIWLSILIVL 308
>U41510-1|ABP49525.1| 327|Caenorhabditis elegans Hypothetical
protein ZC449.6 protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 314 IQYFKTSKPSAGSFVRPNKIIPSKTCAEAIRQYYGDPEDETLA 442
+ + +SK A +FVR I KT R YG P+D T+A
Sbjct: 121 LDIYSSSKAEAEAFVRSQSTIQFKTTCLRFRAIYG-PQDVTVA 162
>U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical
protein T25D10.2 protein.
Length = 231
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2
Query: 434 TLAAHRRTIINEWKREMGAPFIEMVGFEKIHQKQKFDRLLEVCVHDQNVSRAGDVSSL 607
T+ H+ I+NE K G I +GF I QK D C +N S+ G+V L
Sbjct: 65 TVEGHKNAILNERKPRGGEERIPEIGFLVIFDVQKEDEGNYYC-QRENDSKWGEVFQL 121
>AF098504-4|AAC67411.1| 339|Caenorhabditis elegans Hypothetical
protein T27C10.3 protein.
Length = 339
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 401 IRQYYGDPEDETLAAHRRTIINEWKREMGAPFIE--MVGFEK--IHQKQ-KFDRLLEVCV 565
I Y G P ++ A + R +M PF + + FE+ HQK+ + ++L+ C
Sbjct: 243 IHYYQGSPNEKEDAQYARMAYKLLNWDMQRPFTQEQLQDFEEGWTHQKKMREEQLVRTCF 302
Query: 566 HDQN 577
HD N
Sbjct: 303 HDNN 306
>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
C23F12.1a protein.
Length = 2329
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 62 FEPAKIMVGAMPVNLLPKFCNGAMDSCNGVDGN 160
++PAKI VGA+P LL K +D+ GN
Sbjct: 1237 YDPAKIKVGAIPKGLLDKPVYFTVDASEAGVGN 1269
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 62 FEPAKIMVGAMPVNLLPKFCNGAMDSCNGVDGN 160
++PAKI VGA+P LL K +D+ GN
Sbjct: 1237 YDPAKIKVGAIPKGLLDKPVYFTVDASEAGVGN 1269
>Z75526-5|CAA99771.1| 209|Caenorhabditis elegans Hypothetical
protein C06H2.5 protein.
Length = 209
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 532 TEI*SLTRSMRSRSECIKSW*CVFS 606
TE+ + +RS+ E +KSW CV S
Sbjct: 147 TELITKVECVRSKREAVKSWMCVIS 171
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 53 ILIFEPAKIMVGAMPVNLLPKFCNGAMDSCNG 148
+ + +P + V + P FC+G D+C G
Sbjct: 68 VTVIDPTVVSVRKRDCSKSPLFCSGGQDTCEG 99
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 53 ILIFEPAKIMVGAMPVNLLPKFCNGAMDSCNG 148
+ + +P + V + P FC+G D+C G
Sbjct: 68 VTVIDPTVVSVRKRDCSKSPLFCSGGQDTCEG 99
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 53 ILIFEPAKIMVGAMPVNLLPKFCNGAMDSCNG 148
+ + +P + V + P FC+G D+C G
Sbjct: 68 VTVIDPTVVSVRKRDCSKSPLFCSGGQDTCEG 99
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +2
Query: 53 ILIFEPAKIMVGAMPVNLLPKFCNGAMDSCNG 148
+ + +P + V + P FC+G D+C G
Sbjct: 68 VTVIDPTVVSVRKRDCSKSPLFCSGGQDTCEG 99
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 308 DGIQYFKTSKPSAGSFVRPNK--IIPSKTCAEAIRQYYGDPED 430
D + + S S VRP++ II + T R+Y+ +PE+
Sbjct: 3528 DNVSEYSESSTSVSREVRPDEPHIIETTTTTTVTREYHNEPEE 3570
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 308 DGIQYFKTSKPSAGSFVRPNK--IIPSKTCAEAIRQYYGDPED 430
D + + S S VRP++ II + T R+Y+ +PE+
Sbjct: 3528 DNVSEYSESSTSVSREVRPDEPHIIETTTTTTVTREYHNEPEE 3570
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,634,020
Number of Sequences: 27780
Number of extensions: 385601
Number of successful extensions: 980
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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